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OR045355.1__WMC00253.1__X__00046
Bact-VirOR045355.1__WMC00253.1__X__00046
Identity
- Accession:
- OR045355 ↗
- Kingdom:
- phage
Quality
74.5
mean pLDDT
Taxonomy
TaxID: 3065418
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-113
Domain cluster:
rep: KR060090.1__AKN44339.1__X__00056__D234-334
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF21821.4 best | Dit_like | 30.3 | 5.80e-07 | 99.1% | 87.6% |
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2nyiA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.75 | 36.0 | 4.00e-01 | 75.2% | 56.7% |
| 4divV01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.73 | 62.0 | 5.78e-01 | 91.2% | 75.2% |
| 3eaaA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.69 | 60.0 | 5.31e-01 | 93.8% | 82.1% |
| 2rjzA02 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.66 | 42.0 | 4.48e-01 | 92.0% | 72.7% |
| 4o38A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.65 | 41.0 | 4.43e-01 | 89.4% | 75.0% |
| 5ejlA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.64 | 42.0 | 4.08e-01 | 92.0% | 60.5% |
| 3ne5C02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.64 | 41.0 | 4.28e-01 | 90.3% | 70.6% |
| 2l25A00 | 3.30.2000.20 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.63 | 49.0 | 4.59e-01 | 92.9% | 66.7% |
| 1dfaA03 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.63 | 36.0 | 3.94e-01 | 90.3% | 67.4% |
| 6toaF01 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.63 | 46.0 | 4.41e-01 | 90.3% | 66.2% |
| 3uc4A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.62 | 35.0 | 3.90e-01 | 87.6% | 70.6% |
| 8ediA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 37.0 | 3.88e-01 | 92.9% | 64.4% |
| 4f0qD01 | 2.30.280.20 | Mainly Beta › Roll › PUA domain-like › | 0.62 | 53.0 | 4.04e-01 | 92.9% | 55.7% |
| 4hkhA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.61 | 52.0 | 4.78e-01 | 92.0% | 77.9% |
| 1lp9E02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 34.0 | 3.87e-01 | 90.3% | 73.8% |
| 7k0xA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 32.0 | 3.77e-01 | 91.2% | 73.1% |
| 2ednA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 37.0 | 3.70e-01 | 91.2% | 60.2% |
| 1ao7B00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 35.0 | 3.67e-01 | 91.2% | 64.0% |
| 1ekrA00 | 3.30.70.640 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Molybdopterin cofactor biosynthesis C (MoaC) domain | 0.58 | 40.0 | 3.73e-01 | 70.8% | 61.5% |
| 3qwuA03 | 3.30.70.2160 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 39.0 | 3.66e-01 | 94.7% | 56.8% |
| 4hudA01 | 3.30.2000.40 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser | 0.57 | 46.0 | 3.73e-01 | 90.3% | 46.7% |
| 2c5dC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 36.0 | 3.76e-01 | 93.8% | 69.2% |
| 4zxhA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.54 | 38.0 | 3.34e-01 | 73.5% | 93.7% |
| 3amiA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.53 | 39.0 | 3.31e-01 | 92.0% | 44.2% |
| 6ofsA04 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.53 | 38.0 | 3.29e-01 | 91.2% | 45.1% |
| 2z6cA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 37.0 | 3.68e-01 | 71.7% | 93.4% |
| 2nraC02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 39.0 | 4.11e-01 | 89.4% | 85.3% |
| 1uw4A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.53 | 29.0 | 3.17e-01 | 77.0% | 62.6% |
| 1nvmB02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.52 | 45.0 | 4.09e-01 | 93.8% | 83.8% |
| 2rb7A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 35.0 | 3.57e-01 | 70.8% | 76.6% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3943681 | 1.1.13.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_like | 0.92 | 81.0 | 7.23e-01 | 91.2% | 77.3% |
| 3974464 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.82 | 54.0 | 6.45e-01 | 89.4% | 100.0% |
| 5062396 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.82 | 71.0 | 6.54e-01 | 92.0% | 92.1% |
| 3580020 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.79 | 67.0 | 5.54e-01 | 90.3% | 67.2% |
| 3980535 | 1.1.13.51 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_P2_GpU | 0.78 | 69.0 | 6.50e-01 | 94.7% | 81.5% |
| 4034209 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.76 | 64.0 | 6.06e-01 | 90.3% | 82.1% |
| 4033579 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.75 | 64.0 | 6.19e-01 | 91.2% | 83.2% |
| 3944239 | 1.1.13.51 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_P2_GpU | 0.74 | 54.0 | 5.67e-01 | 91.2% | 81.9% |
| 4888726 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.74 | 63.0 | 5.51e-01 | 91.2% | 65.2% |
| 2475124 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.73 | 49.0 | 5.34e-01 | 87.6% | 81.9% |
| 1444177 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.73 | 62.0 | 5.82e-01 | 91.2% | 75.7% |
| 2471637 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.72 | 61.0 | 5.54e-01 | 90.3% | 75.2% |
| 2642579 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.72 | 61.0 | 5.81e-01 | 92.0% | 79.2% |
| 3943316 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.71 | 62.0 | 5.50e-01 | 93.8% | 78.1% |
| 3164699 | 1.1.13.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DNA_circ_N | 0.71 | 59.0 | 5.86e-01 | 91.2% | 87.0% |
| 3587262 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.71 | 51.0 | 5.30e-01 | 90.3% | 80.0% |
| 4952429 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.71 | 47.0 | 4.98e-01 | 90.3% | 76.0% |
| 2832216 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.70 | 59.0 | 5.33e-01 | 90.3% | 76.5% |
| 4888732 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.70 | 59.0 | 5.33e-01 | 91.2% | 66.0% |
| 4873215 | 1.1.13.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2001 | 0.68 | 57.0 | 5.32e-01 | 90.3% | 75.7% |
| 3964955 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.68 | 58.0 | 5.16e-01 | 92.9% | 76.2% |
| 3965192 | 1.1.13.67 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2460 | 0.67 | 56.0 | 5.66e-01 | 91.2% | 91.2% |
| 3966645 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.65 | 47.0 | 4.60e-01 | 87.6% | 68.0% |
| 3801974 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.58 | 42.0 | 4.24e-01 | 73.5% | 99.1% |
| 3796322 | 304.109.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e | 0.58 | 41.0 | 4.08e-01 | 92.0% | 71.3% |
| 3918163 | 304.20.1.1 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP_RNA-bind | 0.58 | 40.0 | 3.70e-01 | 89.4% | 56.4% |
| 4923979 | 304.102.1.5 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,DKCLD,TruB_C_2 | 0.56 | 42.0 | 3.66e-01 | 90.3% | 49.2% |
| 4424180 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.56 | 39.0 | 3.24e-01 | 71.7% | 44.0% |
| 3791442 | 872.3.1.0 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like | 0.55 | 38.0 | 4.11e-01 | 72.6% | 85.3% |
| 5071358 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.55 | 38.0 | 3.63e-01 | 70.8% | 69.2% |
| 3465961 | 304.102.1.6 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 | 0.55 | 45.0 | 3.65e-01 | 89.4% | 51.8% |
| 3919160 | 872.3.1.8 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_3, YbjQ_4 | 0.54 | 40.0 | 3.35e-01 | 77.9% | 43.9% |
| 3170424 | 319.1.1.19 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF29696 | 0.54 | 39.0 | 4.25e-01 | 90.3% | 93.3% |
| 3676013 | 246.3.1.4 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos2 | 0.54 | 47.0 | 3.39e-01 | 100.0% | 52.4% |
| 3592320 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.53 | 44.0 | 4.06e-01 | 86.7% | 70.0% |
| 4255072 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.53 | 43.0 | 3.67e-01 | 89.4% | 56.4% |
| 4943141 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.53 | 36.0 | 3.62e-01 | 71.7% | 71.7% |
| 4590232 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.51 | 43.0 | 4.22e-01 | 91.2% | 88.0% |
| 4282776 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.50 | 42.0 | 4.11e-01 | 92.0% | 89.6% |