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OR045358.1__WMC00611.1__X__00048
Bact-VirOR045358.1__WMC00611.1__X__00048
Identity
- Accession:
- OR045358 ↗
- Kingdom:
- phage
Quality
88.2
mean pLDDT
Taxonomy
TaxID: 3065420
Cluster
View cluster (8 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-97
Domain cluster:
rep: ON453903.1__WAK79726.1__X__00049__D14-122
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09669.16 best | Phage_pRha | 47.3 | 3.40e-12 | 92.2% | 95.6% |
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1dq3A04 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.64 | 51.0 | 4.75e-01 | 94.4% | 67.5% |
| 1kyzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 42.0 | 4.07e-01 | 72.2% | 61.2% |
| 2axyA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.60 | 44.0 | 4.86e-01 | 77.8% | 97.2% |
| 2rrnA01 | 3.30.70.2040 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 40.0 | 4.18e-01 | 96.7% | 75.9% |
| 5w2fA01 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.59 | 48.0 | 4.89e-01 | 93.3% | 93.0% |
| 2yweA03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.59 | 46.0 | 4.80e-01 | 96.7% | 91.5% |
| 3hz7A00 | 3.30.110.40 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain | 0.58 | 32.0 | 3.46e-01 | 93.3% | 63.0% |
| 2nrqA00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.57 | 48.0 | 4.25e-01 | 94.4% | 89.1% |
| 1j4wA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.56 | 43.0 | 4.67e-01 | 82.2% | 100.0% |
| 2ab5B01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.55 | 46.0 | 4.14e-01 | 94.4% | 67.2% |
| 4djbA00 | 3.30.70.2870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 | 0.54 | 45.0 | 4.22e-01 | 95.6% | 92.4% |
| 2ogkD00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.53 | 45.0 | 3.95e-01 | 95.6% | 85.9% |
| 1b24A01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.53 | 39.0 | 3.84e-01 | 83.3% | 74.7% |
| 1fpqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 40.0 | 3.60e-01 | 100.0% | 57.4% |
| 2l48A00 | 3.30.70.2030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 37.0 | 3.78e-01 | 95.6% | 78.8% |
| 7qh2C03 | 3.30.70.2740 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 38.0 | 4.00e-01 | 78.9% | 98.7% |
| 2anrA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.52 | 39.0 | 4.17e-01 | 85.6% | 100.0% |
| 4clfA02 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.51 | 44.0 | 3.57e-01 | 98.9% | 92.9% |
| 4ushA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 41.0 | 3.98e-01 | 97.8% | 77.7% |
| 2dqlA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 38.0 | 3.59e-01 | 81.1% | 73.0% |
| 2uvaG12 | 3.30.70.3330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 42.0 | 3.86e-01 | 96.7% | 94.5% |
| 2oikA00 | 3.30.428.10 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like | 0.50 | 37.0 | 3.31e-01 | 80.0% | 79.9% |
| 2wnyA00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.50 | 42.0 | 3.74e-01 | 94.4% | 86.9% |
| 4oj3B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 39.0 | 3.86e-01 | 96.7% | 81.1% |
| 6j09A02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.50 | 38.0 | 4.06e-01 | 90.0% | 92.3% |
| 5dymA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 34.0 | 3.40e-01 | 71.1% | 71.9% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3947416 | 101.1.9.88 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Phage_pRha | 0.88 | 83.0 | 7.70e-01 | 100.0% | 86.4% |
| 3518030 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.86 | 63.0 | 7.07e-01 | 75.6% | 97.1% |
| 3984393 | 101.1.9.88 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Phage_pRha | 0.80 | 71.0 | 6.63e-01 | 95.6% | 79.1% |
| 3983963 | 101.1.9.41 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › ORF6N | 0.77 | 70.0 | 6.65e-01 | 98.9% | 97.1% |
| 4998593 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.71 | 54.0 | 4.92e-01 | 81.1% | 62.6% |
| 3968916 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.70 | 59.0 | 5.66e-01 | 100.0% | 79.0% |
| 4538612 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.68 | 48.0 | 3.11e-01 | 72.2% | 17.4% |
| 3969012 | 101.1.2.485 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF2513 | 0.66 | 42.0 | 4.23e-01 | 73.3% | 64.4% |
| 3505855 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.61 | 45.0 | 4.74e-01 | 78.9% | 86.3% |
| 5078552 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.61 | 49.0 | 3.94e-01 | 94.4% | 44.6% |
| 5023791 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.60 | 48.0 | 4.50e-01 | 96.7% | 70.9% |
| 4508433 | 314.1.1.3 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2d | 0.59 | 42.0 | 2.78e-01 | 75.6% | 17.6% |
| 3754929 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.59 | 45.0 | 4.29e-01 | 82.2% | 100.0% |
| 3178011 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.58 | 49.0 | 4.27e-01 | 94.4% | 60.0% |
| 3602264 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.58 | 38.0 | 3.91e-01 | 88.9% | 69.4% |
| 3800979 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.57 | 42.0 | 4.28e-01 | 78.9% | 82.2% |
| 5528 | 882.1.1.4 ↗ | a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding | 0.57 | 48.0 | 4.25e-01 | 94.4% | 89.1% |
| 3782190 | 101.1.2.65 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 | 0.57 | 40.0 | 3.70e-01 | 72.2% | 74.6% |
| 5028314 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.57 | 43.0 | 4.15e-01 | 95.6% | 70.5% |
| 3838183 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.57 | 35.0 | 4.17e-01 | 73.3% | 100.0% |
| 3485931 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.56 | 44.0 | 4.41e-01 | 83.3% | 84.4% |
| 3621644 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.56 | 43.0 | 4.21e-01 | 84.4% | 86.0% |
| 3688261 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.55 | 43.0 | 4.19e-01 | 84.4% | 78.0% |
| 4948386 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.54 | 40.0 | 4.21e-01 | 78.9% | 93.8% |
| 5062639 | 101.1.2.15 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR | 0.54 | 42.0 | 4.12e-01 | 85.6% | 77.9% |
| 5076707 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.54 | 37.0 | 3.60e-01 | 71.1% | 68.6% |
| 3509042 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 37.0 | 3.31e-01 | 73.3% | 49.2% |
| 4325040 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.54 | 46.0 | 4.13e-01 | 96.7% | 76.2% |
| 3389084 | 3937.1.1.2 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin | 0.54 | 44.0 | 3.01e-01 | 90.0% | 78.2% |
| 4819807 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.53 | 40.0 | 4.26e-01 | 83.3% | 97.4% |
| 4439773 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.53 | 40.0 | 4.12e-01 | 95.6% | 85.9% |
| 4966429 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.53 | 38.0 | 4.15e-01 | 96.7% | 98.6% |
| 3285382 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.52 | 35.0 | 3.38e-01 | 70.0% | 64.5% |
| 3720044 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.52 | 43.0 | 4.37e-01 | 93.3% | 93.3% |
| 4978118 | 241.1.1.5 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › DUF2299 | 0.51 | 37.0 | 3.17e-01 | 78.9% | 67.1% |
| 4979815 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.51 | 35.0 | 3.56e-01 | 88.9% | 72.2% |
| 4928248 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 40.0 | 3.58e-01 | 86.7% | 80.0% |
| 3211111 | 3937.1.1.2 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin | 0.51 | 42.0 | 2.81e-01 | 92.2% | 73.9% |
| 5082386 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.51 | 36.0 | 3.32e-01 | 75.6% | 60.5% |
| 3907671 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.50 | 38.0 | 4.06e-01 | 94.4% | 98.7% |
| 3477897 | 304.44.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 | 0.50 | 40.0 | 4.02e-01 | 95.6% | 87.8% |
| 5064968 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 36.0 | 3.26e-01 | 75.6% | 74.6% |
| 4961841 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.50 | 42.0 | 3.81e-01 | 96.7% | 76.9% |
| 4416349 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.50 | 39.0 | 4.11e-01 | 97.8% | 97.5% |