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OR047306.1__WJZ46460.1__X__00011
Bact-VirOR047306.1__WJZ46460.1__X__00011
Identity
- Accession:
- OR047306 ↗
- Kingdom:
- phage
Quality
82.5
mean pLDDT
Taxonomy
TaxID: 3058839
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 26-101
Domain cluster:
rep: NC_047925.1__YP_009798321.1__HOS79_gp108__00101__D161-239
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4e9jB01 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.92 | 81.0 | 6.46e-01 | 93.4% | 54.3% |
| 3ossD00 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.90 | 79.0 | 6.08e-01 | 93.4% | 56.1% |
| 3gr5A01 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.90 | 81.0 | 7.80e-01 | 96.1% | 85.9% |
| 7pmpA01 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.87 | 74.0 | 7.58e-01 | 92.1% | 100.0% |
| 4jtmA00 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.87 | 76.0 | 7.50e-01 | 94.7% | 93.8% |
| 4m0nA02 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.86 | 76.0 | 7.57e-01 | 94.7% | 96.1% |
| 4g08A01 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.83 | 70.0 | 7.27e-01 | 90.8% | 100.0% |
| 3adyA00 | 3.55.50.60 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › DotD protein | 0.82 | 73.0 | 6.59e-01 | 97.4% | 77.5% |
| 3gs9A02 | 3.55.50.40 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.81 | 74.0 | 6.93e-01 | 100.0% | 89.1% |
| 2p5zX02 | 3.55.50.10 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains | 0.81 | 73.0 | 6.70e-01 | 100.0% | 89.7% |
| 1zzvA01 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.78 | 67.0 | 6.84e-01 | 93.4% | 98.6% |
| 3d37A02 | 3.55.50.10 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains | 0.78 | 67.0 | 6.45e-01 | 94.7% | 89.4% |
| 2a02A01 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.76 | 64.0 | 6.46e-01 | 93.4% | 94.7% |
| 3ov5A00 | 3.55.50.70 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.73 | 62.0 | 6.07e-01 | 96.1% | 94.0% |
| 4fppA02 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.64 | 52.0 | 4.24e-01 | 86.8% | 99.3% |
| 1u02A02 | 3.30.70.1020 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trehalose-6-phosphate phosphatase related protein; domain 2 | 0.59 | 46.0 | 4.68e-01 | 85.5% | 89.5% |
| 8g3lE01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.57 | 48.0 | 3.66e-01 | 94.7% | 91.6% |
| 7jt8I01 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.55 | 39.0 | 2.85e-01 | 76.3% | 92.6% |
| 3lycA00 | 2.160.20.120 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.54 | 37.0 | 2.59e-01 | 71.1% | 22.8% |
| 1xviA02 | 3.30.980.20 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Putative mannosyl-3-phosphoglycerate phosphatase; domain 2 | 0.54 | 42.0 | 3.97e-01 | 85.5% | 90.4% |
ECOD (68)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3948879 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.99 | 88.0 | 8.94e-01 | 92.1% | 93.3% |
| 3966286 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.96 | 88.0 | 8.88e-01 | 94.7% | 96.0% |
| 4008875 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.95 | 86.0 | 8.68e-01 | 94.7% | 96.0% |
| 3981376 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.92 | 81.0 | 8.24e-01 | 93.4% | 94.7% |
| 1389175 | 3070.1.1.10 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › T3S_SPI-1_N0 | 0.92 | 80.0 | 7.79e-01 | 92.1% | 85.4% |
| 3974036 | 3070.1.1.10 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › T3S_SPI-1_N0 | 0.91 | 80.0 | 8.14e-01 | 93.4% | 94.7% |
| 1070142 | 3070.1.1.11 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › type_II_gspD_N0 | 0.91 | 80.0 | 7.83e-01 | 93.4% | 93.8% |
| 185652 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.90 | 85.0 | 6.96e-01 | 100.0% | 64.1% |
| 1815424 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.90 | 78.0 | 7.87e-01 | 92.1% | 93.3% |
| 4480906 | 3070.1.1.10 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › T3S_SPI-1_N0 | 0.90 | 81.0 | 7.96e-01 | 96.1% | 91.3% |
| 4048982 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.89 | 81.0 | 7.94e-01 | 96.1% | 91.3% |
| 4484921 | 3070.1.1.11 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › type_II_gspD_N0 | 0.89 | 79.0 | 7.76e-01 | 94.7% | 96.2% |
| 1833073 | 3070.1.1.11 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › type_II_gspD_N0 | 0.87 | 76.0 | 7.43e-01 | 93.4% | 91.5% |
| 2883219 | 3070.1.1.11 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › type_II_gspD_N0 | 0.86 | 73.0 | 6.90e-01 | 90.8% | 81.1% |
| 3972068 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.86 | 76.0 | 7.15e-01 | 94.7% | 88.9% |
| 1108144 | 3070.1.1.7 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › FecR_C | 0.86 | 76.0 | 7.32e-01 | 94.7% | 88.1% |
| 3163777 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.85 | 79.0 | 7.78e-01 | 100.0% | 95.0% |
| 3967139 | 3070.1.1.11 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › type_II_gspD_N0 | 0.85 | 79.0 | 7.75e-01 | 100.0% | 98.8% |
| 3948421 | 3070.1.1.2 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD | 0.85 | 74.0 | 7.16e-01 | 94.7% | 85.9% |
| 3974983 | 3070.1.1.10 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › T3S_SPI-1_N0 | 0.84 | 74.0 | 7.29e-01 | 94.7% | 91.3% |
| 3966573 | 3070.1.1.2 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD | 0.84 | 74.0 | 7.02e-01 | 96.1% | 88.9% |
| 3972306 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.84 | 74.0 | 7.02e-01 | 96.1% | 88.9% |
| 3964700 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.84 | 68.0 | 6.68e-01 | 85.5% | 100.0% |
| 3511355 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.84 | 75.0 | 6.43e-01 | 96.1% | 92.2% |
| 3972661 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.84 | 71.0 | 7.22e-01 | 92.1% | 94.7% |
| 3982238 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.84 | 76.0 | 7.17e-01 | 100.0% | 93.3% |
| 3974185 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.84 | 70.0 | 7.01e-01 | 90.8% | 91.0% |
| 4087530 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.84 | 70.0 | 7.10e-01 | 92.1% | 92.0% |
| 4929757 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.83 | 73.0 | 6.43e-01 | 96.1% | 90.0% |
| 3968711 | 3070.1.1.2 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD | 0.83 | 73.0 | 6.90e-01 | 96.1% | 90.0% |
| 4846239 | 3070.1.1.12 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Gp44-like_2nd | 0.83 | 76.0 | 7.36e-01 | 100.0% | 94.0% |
| 4809347 | 3070.1.1.16 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › PF30637 | 0.82 | 74.0 | 7.22e-01 | 100.0% | 90.2% |
| 3970829 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.82 | 73.0 | 6.89e-01 | 97.4% | 88.9% |
| 3388174 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.82 | 71.0 | 7.01e-01 | 94.7% | 98.8% |
| 185292 | 3070.1.1.18 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › PF26674 | 0.82 | 73.0 | 6.92e-01 | 97.4% | 89.9% |
| 4034461 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.81 | 72.0 | 6.57e-01 | 97.4% | 88.0% |
| 4889789 | 3070.1.1.16 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › PF30637 | 0.81 | 72.0 | 6.91e-01 | 97.4% | 88.4% |
| 3503726 | 3070.1.1.8 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › DotD | 0.81 | 72.0 | 7.15e-01 | 97.4% | 92.5% |
| 3974451 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.81 | 70.0 | 6.76e-01 | 94.7% | 87.1% |
| 3967742 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.81 | 67.0 | 6.52e-01 | 90.8% | 85.7% |
| 4200887 | 3070.1.1.17 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › YQBQ | 0.81 | 70.0 | 6.64e-01 | 96.1% | 90.0% |
| 3059160 | 3070.1.1.13 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › E217_GP41 | 0.80 | 70.0 | 6.89e-01 | 94.7% | 93.8% |
| 2725959 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.80 | 72.0 | 5.77e-01 | 100.0% | 82.3% |
| 4339226 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.80 | 69.0 | 6.66e-01 | 94.7% | 84.7% |
| 3977381 | 3070.1.1.2 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD | 0.79 | 69.0 | 6.68e-01 | 96.1% | 87.1% |
| 4957566 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.79 | 69.0 | 6.53e-01 | 94.7% | 88.9% |
| 184487 | 3070.1.1.12 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Gp44-like_2nd | 0.78 | 67.0 | 6.45e-01 | 94.7% | 89.4% |
| 5002751 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.78 | 67.0 | 6.49e-01 | 96.1% | 89.4% |
| 4531399 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.77 | 67.0 | 6.52e-01 | 96.1% | 92.9% |
| 1116063 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.77 | 69.0 | 6.50e-01 | 100.0% | 87.1% |
| 3604611 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.77 | 67.0 | 6.32e-01 | 96.1% | 81.1% |
| 3972183 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.76 | 68.0 | 6.60e-01 | 100.0% | 97.6% |
| 3974527 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.76 | 68.0 | 6.35e-01 | 100.0% | 93.7% |
| 3967349 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.74 | 66.0 | 6.40e-01 | 100.0% | 94.1% |
| 3941987 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.73 | 62.0 | 5.99e-01 | 94.7% | 90.6% |
| 146927 | 3070.1.1.6 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › TcpQ | 0.69 | 58.0 | 5.05e-01 | 94.7% | 65.8% |
| 3588651 | 225.1.1.9 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_5 | 0.60 | 47.0 | 3.81e-01 | 85.5% | 69.3% |
| 4375524 | 2006.1.1.7 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP | 0.60 | 41.0 | 2.96e-01 | 72.4% | 99.6% |
| 3587845 | 225.1.1.9 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_5 | 0.58 | 47.0 | 3.74e-01 | 88.2% | 67.7% |
| 5007365 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.57 | 45.0 | 3.72e-01 | 85.5% | 69.1% |
| 3785289 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.56 | 42.0 | 4.56e-01 | 92.1% | 95.4% |
| 4993845 | 320.3.1.4 ↗ | a+b two layers › R3H domain-like › PG1857-like › PG1857-like › DUF483 | 0.55 | 41.0 | 3.23e-01 | 98.7% | 38.7% |
| 4014275 | 810.1.1.0 ↗ | a+b two layers › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) | 0.54 | 40.0 | 3.21e-01 | 81.6% | 59.4% |
| 3686075 | 810.1.1.8 ↗ | a+b two layers › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) › PF25995 | 0.54 | 40.0 | 3.03e-01 | 81.6% | 49.3% |
| 3730670 | 810.1.1.8 ↗ | a+b two layers › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) › PF25995 | 0.53 | 39.0 | 3.35e-01 | 81.6% | 72.1% |
| 3961330 | 7599.1.1.1 ↗ | a/b three-layered sandwiches › UPF0246 protein YaaA › UPF0246 protein YaaA › UPF0246 protein YaaA › H2O2_YaaD | 0.52 | 41.0 | 3.18e-01 | 89.5% | 75.3% |
| 4979481 | 304.110.1.0 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like | 0.52 | 37.0 | 3.58e-01 | 76.3% | 77.8% |
| 3816885 | 320.4.1.0 ↗ | a+b two layers › R3H domain-like › PUB domain › PUB domain | 0.50 | 41.0 | 3.60e-01 | 97.4% | 59.1% |
D2
high
residues 125-182
Domain cluster:
representative
CATH (72)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4e9jB01 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.90 | 81.0 | 5.96e-01 | 100.0% | 40.6% |
| 3ezjA03 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.85 | 71.0 | 7.27e-01 | 100.0% | 94.5% |
| 3ossD00 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.82 | 74.0 | 5.32e-01 | 100.0% | 36.9% |
| 2y3mB01 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.81 | 73.0 | 6.65e-01 | 100.0% | 77.9% |
| 3ezjA02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.80 | 72.0 | 6.83e-01 | 100.0% | 85.3% |
| 3gr5A02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.79 | 71.0 | 6.74e-01 | 100.0% | 86.8% |
| 4g08A02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.75 | 65.0 | 6.15e-01 | 100.0% | 82.9% |
| 4e9jA02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.74 | 65.0 | 6.15e-01 | 100.0% | 91.3% |
| 2kt2A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.73 | 64.0 | 6.12e-01 | 100.0% | 87.0% |
| 1mwyA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.72 | 64.0 | 5.94e-01 | 100.0% | 80.8% |
| 4ctaA02 | 3.30.70.2860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.72 | 64.0 | 5.87e-01 | 100.0% | 85.3% |
| 1fvqA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.72 | 63.0 | 5.94e-01 | 100.0% | 84.7% |
| 5n1qB02 | 3.30.70.470 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.71 | 61.0 | 4.64e-01 | 100.0% | 66.7% |
| 1cc8A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.71 | 62.0 | 5.84e-01 | 100.0% | 80.6% |
| 6d9mA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.71 | 62.0 | 4.62e-01 | 100.0% | 50.3% |
| 8gf5C01 | 3.30.70.470 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.71 | 62.0 | 4.69e-01 | 100.0% | 69.0% |
| 6lpnA04 | 3.30.70.2740 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.71 | 62.0 | 5.29e-01 | 100.0% | 69.5% |
| 2dgrA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.71 | 62.0 | 6.00e-01 | 100.0% | 94.0% |
| 2ctfA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.70 | 60.0 | 5.08e-01 | 100.0% | 64.7% |
| 3u02A01 | 3.30.70.2200 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 61.0 | 4.59e-01 | 100.0% | 50.7% |
| 7ahbB01 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.70 | 56.0 | 5.57e-01 | 100.0% | 88.1% |
| 3sqgB02 | 3.30.70.470 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 59.0 | 4.53e-01 | 100.0% | 66.2% |
| 2k2pA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 60.0 | 5.85e-01 | 100.0% | 92.2% |
| 2xmjA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 61.0 | 5.99e-01 | 100.0% | 93.7% |
| 2crlA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 60.0 | 5.73e-01 | 100.0% | 84.1% |
| 4aimA03 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.68 | 59.0 | 5.60e-01 | 100.0% | 85.9% |
| 4zmuA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.68 | 59.0 | 4.35e-01 | 100.0% | 50.3% |
| 2iboA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 60.0 | 5.20e-01 | 100.0% | 66.3% |
| 3oreA01 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.67 | 59.0 | 5.74e-01 | 100.0% | 97.0% |
| 3jcmH04 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.67 | 58.0 | 5.32e-01 | 100.0% | 79.2% |
| 3mahA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.67 | 56.0 | 5.33e-01 | 100.0% | 78.6% |
| 2cveA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 55.0 | 5.36e-01 | 100.0% | 83.3% |
| 1mpgA01 | 3.30.310.20 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain | 0.67 | 57.0 | 4.72e-01 | 100.0% | 94.6% |
| 4mz0B05 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.67 | 53.0 | 5.16e-01 | 100.0% | 79.1% |
| 4v1al00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.67 | 57.0 | 4.45e-01 | 100.0% | 45.1% |
| 3p96A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.66 | 57.0 | 5.11e-01 | 100.0% | 77.4% |
| 3ungC03 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.66 | 57.0 | 4.44e-01 | 100.0% | 52.6% |
| 1q5yC00 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.65 | 57.0 | 5.09e-01 | 100.0% | 80.5% |
| 4arvA02 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.65 | 47.0 | 3.78e-01 | 81.0% | 100.0% |
| 2ckwA03 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.65 | 54.0 | 4.45e-01 | 100.0% | 74.1% |
| 1nh8A03 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 54.0 | 5.24e-01 | 100.0% | 83.6% |
| 2uvaG03 | 3.30.70.3320 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 54.0 | 4.54e-01 | 100.0% | 55.6% |
| 1kafA00 | 3.90.1150.20 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription regulator MotA, C-terminal domain | 0.64 | 51.0 | 4.24e-01 | 100.0% | 49.1% |
| 4mamB03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.64 | 56.0 | 3.93e-01 | 100.0% | 33.5% |
| 1x8dA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 54.0 | 4.63e-01 | 100.0% | 81.4% |
| 4lvnP00 | 3.30.70.2380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 53.0 | 4.83e-01 | 100.0% | 81.5% |
| 4aukA01 | 3.30.70.2810 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 54.0 | 4.92e-01 | 100.0% | 79.7% |
| 2cdqA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 53.0 | 4.76e-01 | 100.0% | 76.2% |
| 3s1tA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 54.0 | 4.88e-01 | 100.0% | 81.2% |
| 1x31C01 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.62 | 52.0 | 4.41e-01 | 100.0% | 70.5% |
| 1hkqA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 50.0 | 3.98e-01 | 91.4% | 65.6% |
| 2mzjA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.62 | 52.0 | 4.74e-01 | 100.0% | 79.3% |
| 1ulvA04 | 2.60.40.1190 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 53.0 | 3.52e-01 | 100.0% | 68.8% |
| 1vqyB01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 52.0 | 4.50e-01 | 100.0% | 87.4% |
| 2p92A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.60 | 50.0 | 4.34e-01 | 98.3% | 69.5% |
| 4tshB01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 53.0 | 3.77e-01 | 100.0% | 37.6% |
| 6tznA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.60 | 49.0 | 4.15e-01 | 98.3% | 63.9% |
| 2p4bB02 | 3.30.200.100 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › MucB/RseB, C-terminal domain | 0.59 | 43.0 | 3.73e-01 | 81.0% | 95.9% |
| 4je0B01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 51.0 | 3.80e-01 | 100.0% | 45.4% |
| 8begA03 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 50.0 | 3.80e-01 | 100.0% | 45.6% |
| 4d6gA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.58 | 47.0 | 3.71e-01 | 100.0% | 41.5% |
| 3zokA02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.58 | 46.0 | 3.22e-01 | 87.9% | 63.9% |
| 3irpX01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 50.0 | 3.73e-01 | 100.0% | 43.4% |
| 3ejxA02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.57 | 40.0 | 2.96e-01 | 72.4% | 100.0% |
| 2e29A01 | 3.30.70.2280 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 47.0 | 4.40e-01 | 100.0% | 84.2% |
| 5dezA03 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.56 | 39.0 | 3.66e-01 | 74.1% | 94.6% |
| 2woyA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 48.0 | 3.58e-01 | 100.0% | 68.4% |
| 2pcrA02 | 3.40.190.80 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › | 0.55 | 41.0 | 3.40e-01 | 82.8% | 81.7% |
| 1s12A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.55 | 45.0 | 4.02e-01 | 100.0% | 71.3% |
| 3l4yA05 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.54 | 44.0 | 3.44e-01 | 100.0% | 39.9% |
| 5w1uA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 43.0 | 2.56e-01 | 100.0% | 67.0% |
| 3qdhA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 40.0 | 3.14e-01 | 98.3% | 71.8% |
ECOD (91)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3977697 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.91 | 82.0 | 7.87e-01 | 100.0% | 86.2% |
| 1573228 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.90 | 81.0 | 7.81e-01 | 100.0% | 86.2% |
| 3985898 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.88 | 81.0 | 7.40e-01 | 100.0% | 86.7% |
| 5038029 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.88 | 83.0 | 7.10e-01 | 100.0% | 91.8% |
| 3966305 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.88 | 83.0 | 7.45e-01 | 100.0% | 86.7% |
| 4583667 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.86 | 81.0 | 6.81e-01 | 100.0% | 94.4% |
| 4582420 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.86 | 79.0 | 6.57e-01 | 100.0% | 91.6% |
| 3967164 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.85 | 77.0 | 7.25e-01 | 100.0% | 95.7% |
| 4127813 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.85 | 77.0 | 6.15e-01 | 100.0% | 83.6% |
| 2319350 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.84 | 77.0 | 7.18e-01 | 100.0% | 81.7% |
| 3947379 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.83 | 75.0 | 6.90e-01 | 100.0% | 88.0% |
| 4218542 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.83 | 71.0 | 7.07e-01 | 100.0% | 90.0% |
| 2713319 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.82 | 72.0 | 6.96e-01 | 100.0% | 86.2% |
| 3972739 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.82 | 74.0 | 6.97e-01 | 100.0% | 90.0% |
| 4457759 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.81 | 74.0 | 6.32e-01 | 100.0% | 91.1% |
| 4683271 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.81 | 73.0 | 6.85e-01 | 100.0% | 82.9% |
| 4119221 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.78 | 70.0 | 6.75e-01 | 100.0% | 89.2% |
| 3387161 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.78 | 70.0 | 6.39e-01 | 100.0% | 92.0% |
| 3974037 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.78 | 70.0 | 6.42e-01 | 100.0% | 77.3% |
| 3329738 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.78 | 69.0 | 6.08e-01 | 100.0% | 85.9% |
| 4037103 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.77 | 68.0 | 6.62e-01 | 100.0% | 89.2% |
| 4588083 | 327.16.1.15 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N_2 | 0.77 | 69.0 | 6.66e-01 | 100.0% | 90.8% |
| 3420946 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.77 | 68.0 | 6.25e-01 | 100.0% | 97.3% |
| 3730083 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.76 | 68.0 | 5.87e-01 | 100.0% | 73.3% |
| 3626405 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.76 | 69.0 | 6.46e-01 | 100.0% | 97.1% |
| 1824176 | 304.7.1.12 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › LicP_NPro | 0.75 | 62.0 | 6.12e-01 | 100.0% | 87.1% |
| 3594181 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.75 | 67.0 | 6.29e-01 | 100.0% | 88.6% |
| 3814794 | 327.11.2.36 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_DEAH11 | 0.75 | 68.0 | 6.06e-01 | 100.0% | 85.0% |
| 260014 | 327.16.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin_N | 0.75 | 65.0 | 6.15e-01 | 100.0% | 82.9% |
| 3685955 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.74 | 66.0 | 5.81e-01 | 100.0% | 77.6% |
| 3195256 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.74 | 65.0 | 5.76e-01 | 100.0% | 69.4% |
| 5001403 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.73 | 65.0 | 6.12e-01 | 100.0% | 87.1% |
| 4029258 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.73 | 65.0 | 6.14e-01 | 100.0% | 88.6% |
| 1481304 | 304.5.1.4 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CdAMP_rec | 0.73 | 62.0 | 6.21e-01 | 100.0% | 94.8% |
| 3687265 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.73 | 64.0 | 6.02e-01 | 100.0% | 94.3% |
| 4221576 | 327.11.2.38 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_SLS1_1 | 0.73 | 64.0 | 6.18e-01 | 98.3% | 92.3% |
| 3486305 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.72 | 65.0 | 6.42e-01 | 100.0% | 100.0% |
| 3177876 | 304.162.1.0 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain | 0.72 | 62.0 | 6.18e-01 | 100.0% | 100.0% |
| 5044181 | 304.117.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC | 0.72 | 65.0 | 5.94e-01 | 100.0% | 84.0% |
| 3628325 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.72 | 64.0 | 6.20e-01 | 100.0% | 95.4% |
| 3629559 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.72 | 64.0 | 5.76e-01 | 100.0% | 88.7% |
| 4976136 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.71 | 62.0 | 5.31e-01 | 100.0% | 100.0% |
| 3920054 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.71 | 62.0 | 5.88e-01 | 100.0% | 94.3% |
| 4976823 | 305.2.1.0 ↗ | a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) | 0.71 | 64.0 | 5.89e-01 | 100.0% | 80.0% |
| 3182317 | 327.11.2.38 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_SLS1_1 | 0.71 | 62.0 | 6.01e-01 | 100.0% | 95.4% |
| 3892187 | 327.11.2.39 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_PARP14_3 | 0.71 | 62.0 | 5.75e-01 | 100.0% | 80.0% |
| 4970834 | 327.11.2.13 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_PNO1_2nd | 0.71 | 61.0 | 5.20e-01 | 100.0% | 74.0% |
| 4293970 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.71 | 62.0 | 5.73e-01 | 100.0% | 78.7% |
| 3386543 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.71 | 60.0 | 5.86e-01 | 100.0% | 87.5% |
| 3369681 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.71 | 63.0 | 6.07e-01 | 100.0% | 98.5% |
| 3220398 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.71 | 62.0 | 6.21e-01 | 100.0% | 96.7% |
| 3676685 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.71 | 62.0 | 5.99e-01 | 100.0% | 92.3% |
| 3895824 | 327.11.2.39 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_PARP14_3 | 0.70 | 61.0 | 6.04e-01 | 100.0% | 95.0% |
| 3839207 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.70 | 62.0 | 5.48e-01 | 100.0% | 71.8% |
| 3734074 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.70 | 61.0 | 5.81e-01 | 100.0% | 92.9% |
| 5001328 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.70 | 61.0 | 5.44e-01 | 100.0% | 75.3% |
| 3892183 | 327.11.2.42 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_PARP14_6 | 0.70 | 60.0 | 4.57e-01 | 98.3% | 43.6% |
| 3202786 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.70 | 61.0 | 4.96e-01 | 100.0% | 64.5% |
| 3223770 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.70 | 61.0 | 5.74e-01 | 100.0% | 90.0% |
| 4978228 | 305.2.1.0 ↗ | a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) | 0.69 | 60.0 | 5.85e-01 | 100.0% | 95.4% |
| 4634282 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.69 | 60.0 | 5.88e-01 | 100.0% | 95.2% |
| 3589482 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.69 | 59.0 | 5.61e-01 | 100.0% | 81.4% |
| 4943420 | 3501.1.1.2 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › DUF2067 | 0.69 | 60.0 | 5.68e-01 | 100.0% | 90.0% |
| 4025598 | 327.11.2.33 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_DEAH11_2nd | 0.69 | 60.0 | 5.46e-01 | 100.0% | 76.2% |
| 5012782 | 3501.1.1.2 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › DUF2067 | 0.69 | 59.0 | 5.73e-01 | 96.6% | 89.2% |
| 3887886 | 604.3.1.11 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › DUF155 | 0.69 | 60.0 | 3.97e-01 | 100.0% | 33.5% |
| 4991338 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.68 | 57.0 | 5.32e-01 | 96.6% | 84.0% |
| 3781763 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.68 | 59.0 | 4.99e-01 | 100.0% | 82.0% |
| 3755055 | 331.1.1.12 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF155 | 0.68 | 59.0 | 4.56e-01 | 100.0% | 60.7% |
| 4311880 | 304.11.1.4 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › FAS_AT_central | 0.68 | 57.0 | 4.83e-01 | 100.0% | 57.1% |
| 3386110 | 306.3.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like | 0.68 | 59.0 | 5.10e-01 | 98.3% | 70.0% |
| 5033197 | 306.6.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like | 0.68 | 58.0 | 5.63e-01 | 100.0% | 92.3% |
| 4961020 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.68 | 58.0 | 5.62e-01 | 98.3% | 90.8% |
| 3596989 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.67 | 58.0 | 5.29e-01 | 100.0% | 76.2% |
| 3596282 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.67 | 57.0 | 4.90e-01 | 96.6% | 75.8% |
| 3806470 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.67 | 57.0 | 5.72e-01 | 100.0% | 96.7% |
| 3179971 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.67 | 57.0 | 5.20e-01 | 98.3% | 100.0% |
| 4329039 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.67 | 59.0 | 5.60e-01 | 100.0% | 85.7% |
| 4358940 | 304.8.1.21 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 | 0.67 | 56.0 | 5.04e-01 | 100.0% | 76.5% |
| 4126668 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.66 | 56.0 | 4.73e-01 | 100.0% | 57.1% |
| 1442273 | 304.11.1.4 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › FAS_AT_central | 0.66 | 56.0 | 4.84e-01 | 100.0% | 61.9% |
| 4796691 | 2007.1.19.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like › SAT | 0.65 | 54.0 | 4.57e-01 | 100.0% | 54.5% |
| 4011415 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.64 | 53.0 | 4.83e-01 | 100.0% | 74.1% |
| 4378578 | 304.11.1.2 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › SAT | 0.63 | 53.0 | 5.05e-01 | 100.0% | 87.1% |
| 3625339 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.63 | 53.0 | 4.60e-01 | 100.0% | 65.3% |
| 3892177 | 304.9.1.104 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_PARP14_2 | 0.62 | 52.0 | 4.63e-01 | 100.0% | 72.2% |
| 4185829 | 3253.1.1.0 ↗ | a+b two layers › ferredoxin-like domain in flagellar biosynthesis protein flhA › ferredoxin-like domain in flagellar biosynthesis protein flhA › ferredoxin-like domain in flagellar biosynthesis protein flhA | 0.58 | 41.0 | 4.27e-01 | 96.6% | 90.0% |
| 5083528 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.58 | 34.0 | 3.01e-01 | 72.4% | 41.2% |
| 4992659 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.55 | 40.0 | 3.32e-01 | 81.0% | 43.5% |
| 3410486 | 220.1.1.57 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_20 | 0.54 | 37.0 | 2.87e-01 | 72.4% | 80.8% |
| 3756402 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.52 | 34.0 | 2.09e-01 | 74.1% | 10.1% |
D3
medium
residues 187-202_263-363_395-409
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00263.27 best | Secretin | 73.7 | 1.90e-20 | 87.9% | 68.8% |
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wznA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.65 | 29.0 | 4.31e-01 | 79.5% | 100.0% |
| 8p97A01 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.56 | 47.0 | 3.09e-01 | 93.2% | 76.4% |
| 6fokB01 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.55 | 46.0 | 2.98e-01 | 92.4% | 35.0% |
| 3njtA01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.55 | 46.0 | 3.48e-01 | 89.4% | 99.0% |
| 7a0hA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.54 | 46.0 | 4.24e-01 | 93.2% | 87.9% |
| 2qomB00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.54 | 47.0 | 3.79e-01 | 97.7% | 89.2% |
| 6wilA01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.54 | 45.0 | 3.37e-01 | 92.4% | 54.4% |
| 2f1cX00 | 2.40.160.40 | Mainly Beta › Beta Barrel › Porin › monomeric porin ompg | 0.54 | 44.0 | 3.53e-01 | 87.1% | 90.9% |
| 2wstA00 | 2.60.90.10 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain | 0.53 | 34.0 | 3.17e-01 | 100.0% | 48.3% |
| 2lhfA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.52 | 47.0 | 4.26e-01 | 100.0% | 100.0% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.52 | 44.0 | 4.24e-01 | 93.2% | 87.7% |
| 1d6uA03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.52 | 43.0 | 3.03e-01 | 88.6% | 87.3% |
| 1ksiA03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.52 | 42.0 | 3.01e-01 | 88.6% | 85.8% |
| 3bxoA02 | 2.20.130.10 | Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains | 0.51 | 26.0 | 3.40e-01 | 99.2% | 100.0% |
| 1lshA04 | 2.20.80.10 | Mainly Beta › Single Sheet › Lipovitellin-phosvitin complex, chain A, domain 4 › Lipovitellin-phosvitin complex, chain A, domain 4 | 0.51 | 37.0 | 3.06e-01 | 75.0% | 86.5% |
| 4eg9A00 | 2.50.20.40 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.51 | 41.0 | 3.46e-01 | 99.2% | 50.2% |
| 2hdiA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.50 | 44.0 | 2.98e-01 | 93.9% | 42.5% |
| 1i78B00 | 2.40.128.90 | Mainly Beta › Beta Barrel › Lipocalin › OMPT-like | 0.50 | 44.0 | 3.52e-01 | 100.0% | 93.4% |
| 1by5A02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.50 | 43.0 | 2.83e-01 | 93.2% | 43.3% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3966545 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.99 | 95.0 | 7.17e-01 | 97.7% | 96.6% |
| 3972818 | 327.16.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin | 0.96 | 94.0 | 7.08e-01 | 100.0% | 88.5% |
| 5038030 | 327.16.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin | 0.95 | 93.0 | 7.05e-01 | 100.0% | 98.5% |
| 3165874 | 327.16.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin | 0.93 | 90.0 | 6.98e-01 | 100.0% | 95.3% |
| 3972404 | 327.16.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin | 0.88 | 84.0 | 7.25e-01 | 98.5% | 99.5% |
| 4634707 | 327.16.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin | 0.87 | 83.0 | 6.52e-01 | 99.2% | 86.9% |
| 3967141 | 327.16.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin | 0.86 | 83.0 | 6.26e-01 | 100.0% | 84.0% |
| 2319348 | 327.16.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin | 0.86 | 81.0 | 5.95e-01 | 97.7% | 80.7% |
| 4888072 | 327.16.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin | 0.84 | 73.0 | 6.04e-01 | 90.9% | 69.3% |
| 3838939 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.55 | 47.0 | 3.39e-01 | 93.2% | 59.2% |
| 4622159 | 5084.5.1.35 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_2 | 0.55 | 42.0 | 3.09e-01 | 80.3% | 63.5% |
| 3648159 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.54 | 31.0 | 3.19e-01 | 91.7% | 56.2% |
| 4042627 | 5084.1.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl | 0.54 | 48.0 | 4.47e-01 | 100.0% | 95.2% |
| 3890886 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.53 | 30.0 | 3.64e-01 | 79.5% | 87.5% |
| 5027751 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.52 | 47.0 | 4.53e-01 | 100.0% | 99.3% |
| 3974176 | 5084.8.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore | 0.52 | 45.0 | 3.13e-01 | 94.7% | 38.0% |
| 5064236 | 512.1.1.2 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd | 0.52 | 35.0 | 3.73e-01 | 93.9% | 79.1% |
| 4285298 | 5084.1.1.29 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF27340 | 0.51 | 46.0 | 4.10e-01 | 100.0% | 98.9% |
| 4668983 | 4051.1.1.0 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz | 0.51 | 43.0 | 4.11e-01 | 93.2% | 83.7% |
| 3718960 | 4051.1.1.2 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A | 0.51 | 44.0 | 3.77e-01 | 93.2% | 78.6% |
D4
medium
residues 203-214_245-262_364-394
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3jamD02 | 3.30.1140.32 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain | 0.55 | 42.0 | 3.28e-01 | 100.0% | 38.3% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3387162 | 327.6.1.6 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › Secretin | 0.92 | 86.0 | 5.49e-01 | 100.0% | 84.0% |
| 4330210 | 327.6.1.6 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › Secretin | 0.91 | 84.0 | 5.31e-01 | 100.0% | 68.1% |
| 4518550 | 327.6.1.6 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › Secretin | 0.89 | 82.0 | 5.33e-01 | 100.0% | 79.6% |
| 3980299 | 327.6.1.6 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › Secretin | 0.88 | 80.0 | 5.29e-01 | 100.0% | 83.9% |
| 4338913 | 327.16.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin | 0.85 | 78.0 | 5.09e-01 | 100.0% | 86.7% |
| 3972069 | 327.16.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin | 0.83 | 77.0 | 4.97e-01 | 100.0% | 76.3% |
| 3966545 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.82 | 76.0 | 4.85e-01 | 100.0% | 86.0% |
| 3967141 | 327.16.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin | 0.80 | 73.0 | 4.64e-01 | 100.0% | 72.7% |
| 5038030 | 327.16.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin | 0.80 | 72.0 | 4.66e-01 | 100.0% | 86.8% |
| 3165874 | 327.16.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin | 0.79 | 72.0 | 4.67e-01 | 100.0% | 83.1% |
| 4560940 | 327.16.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin | 0.79 | 72.0 | 4.67e-01 | 100.0% | 84.7% |
| 1933318 | 327.6.1.6 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › Secretin | 0.78 | 69.0 | 4.55e-01 | 100.0% | 72.4% |
| 4856992 | 327.16.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin | 0.78 | 58.0 | 4.18e-01 | 80.3% | 90.1% |
| 4484922 | 327.16.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin | 0.78 | 70.0 | 4.51e-01 | 100.0% | 81.8% |
| 2468374 | 327.16.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin | 0.76 | 68.0 | 4.30e-01 | 100.0% | 69.8% |
| 2319348 | 327.16.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin | 0.76 | 68.0 | 4.29e-01 | 100.0% | 71.4% |
| 4506686 | 327.16.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin | 0.76 | 68.0 | 5.10e-01 | 100.0% | 91.7% |
| 4405392 | 327.16.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin | 0.73 | 65.0 | 4.13e-01 | 100.0% | 71.8% |
| 3972818 | 327.16.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin | 0.72 | 64.0 | 4.16e-01 | 100.0% | 77.0% |
| 4120726 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.71 | 66.0 | 5.69e-01 | 100.0% | 94.4% |
| 4505312 | 230.2.1.2 ↗ | a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › VAR1 | 0.51 | 40.0 | 3.46e-01 | 100.0% | 54.7% |