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OR050627.1__WIC41266.1__MA9V1_002__00002
Bact-VirOR050627.1__WIC41266.1__MA9V1_002__00002
Identity
- Accession:
- OR050627 ↗
- Kingdom:
- phage
Quality
73.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 29-183
Domain cluster:
rep: SR-VP_0-2_scaffold_141_4750547_curated_closed_complete_prodigal-single.1__X__X__00649__D23-135
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1y12B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.74 | 56.0 | 5.68e-01 | 100.0% | 78.2% |
| 4w64B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.73 | 58.0 | 5.76e-01 | 100.0% | 80.0% |
| 4hkhA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.70 | 56.0 | 5.75e-01 | 100.0% | 85.9% |
| 3he1A00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.68 | 53.0 | 5.49e-01 | 100.0% | 85.7% |
| 3eaaA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.67 | 59.0 | 5.88e-01 | 100.0% | 88.9% |
| 2yn3B03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 22.0 | 3.13e-01 | 80.0% | 59.2% |
| 2rjzA02 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.64 | 36.0 | 4.42e-01 | 92.9% | 84.8% |
| 3ne5C02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.60 | 34.0 | 4.03e-01 | 96.8% | 82.4% |
| 3db0B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 39.0 | 4.35e-01 | 100.0% | 83.9% |
| 2j5aA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.59 | 30.0 | 3.58e-01 | 80.6% | 70.8% |
| 7k0xA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 26.0 | 3.51e-01 | 89.7% | 80.8% |
| 1v4pC01 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.56 | 34.0 | 4.06e-01 | 99.4% | 88.0% |
| 2arzA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 40.0 | 4.06e-01 | 100.0% | 76.0% |
| 4f0qD01 | 2.30.280.20 | Mainly Beta › Roll › PUA domain-like › | 0.55 | 49.0 | 4.17e-01 | 100.0% | 59.2% |
| 2d5wA02 | 3.90.76.10 | Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 | 0.53 | 37.0 | 4.12e-01 | 94.8% | 93.2% |
| 1qf6A02 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.53 | 30.0 | 3.57e-01 | 98.1% | 80.2% |
| 3wa5B00 | 2.60.120.1690 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 28.0 | 3.12e-01 | 89.0% | 63.7% |
| 3f62A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 29.0 | 3.38e-01 | 91.6% | 75.9% |
| 2gjvA00 | 3.30.2000.10 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like | 0.52 | 38.0 | 4.02e-01 | 98.1% | 86.0% |
| 1tu1A00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.51 | 34.0 | 3.50e-01 | 89.0% | 71.5% |
| 2e9wA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 23.0 | 2.81e-01 | 88.4% | 64.8% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995820 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.84 | 65.0 | 7.12e-01 | 100.0% | 95.4% |
| 3581358 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.83 | 69.0 | 6.98e-01 | 100.0% | 87.1% |
| 2101663 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.81 | 69.0 | 6.85e-01 | 98.7% | 84.7% |
| 4929634 | 1.1.5.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 | 0.81 | 57.0 | 4.61e-01 | 99.4% | 40.7% |
| 5003885 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.79 | 62.0 | 6.45e-01 | 100.0% | 86.9% |
| 4995819 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.78 | 68.0 | 6.99e-01 | 100.0% | 95.3% |
| 2832217 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.78 | 62.0 | 6.46e-01 | 100.0% | 89.4% |
| 2471641 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.77 | 60.0 | 6.20e-01 | 100.0% | 84.6% |
| 5082881 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.77 | 58.0 | 6.41e-01 | 99.4% | 96.0% |
| 3058416 | 1.1.5.39 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › TssD | 0.77 | 53.0 | 5.86e-01 | 100.0% | 86.6% |
| 2471637 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.76 | 62.0 | 6.37e-01 | 100.0% | 88.6% |
| 3023894 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.75 | 62.0 | 6.37e-01 | 99.4% | 89.3% |
| 2832216 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.72 | 61.0 | 6.21e-01 | 100.0% | 90.2% |
| 136185 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.67 | 59.0 | 5.88e-01 | 100.0% | 88.9% |
| 4973765 | 3156.1.1.32 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Inhibitor_I42 | 0.64 | 30.0 | 3.66e-01 | 89.0% | 68.0% |
| 3580020 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.62 | 56.0 | 5.20e-01 | 98.7% | 79.5% |
| 3513366 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.61 | 56.0 | 5.41e-01 | 100.0% | 92.6% |
| 4933378 | 304.133.1.1 ↗ | a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL | 0.55 | 29.0 | 3.41e-01 | 89.7% | 71.4% |
| 224015 | 1.1.9.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › RE_AspBHI_N | 0.54 | 49.0 | 4.12e-01 | 99.4% | 58.3% |
| 3929896 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.54 | 30.0 | 3.81e-01 | 89.0% | 92.5% |
| 5035611 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.52 | 25.0 | 2.56e-01 | 92.3% | 41.9% |
| 4291659 | 304.124.1.8 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_Mu_Gp37 | 0.51 | 41.0 | 4.28e-01 | 98.1% | 92.1% |
| 3178902 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.51 | 42.0 | 3.90e-01 | 100.0% | 70.0% |
| 5048236 | 314.1.1.3 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2d | 0.50 | 28.0 | 2.17e-01 | 99.4% | 22.2% |
| 4454941 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.50 | 32.0 | 3.25e-01 | 91.6% | 64.7% |