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OR050627.1__WIC41311.1__MA9V1_047__00047

Bact-Vir

OR050627.1__WIC41311.1__MA9V1_047__00047

Identity

Accession:
OR050627 ↗
Kingdom:
phage

Quality

73.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chryseobacterium_phage_MA9V-1

TaxID: 2936916

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 26-130
PDB
Domain cluster: rep: GWB1_scaffold_combined_curated_closed_complete_prodigal-single.1__X__X__00331__D112-215
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1t94A01 1.10.150.810 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.62 36.0 3.69e-01 93.3% 58.6%
2ifuD00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.61 45.0 3.33e-01 86.7% 30.0%
3fp3A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 39.0 3.61e-01 84.8% 51.9%
4g1tA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 33.0 4.03e-01 75.2% 95.1%
1llaA03 1.10.1280.10 Mainly Alpha › Orthogonal Bundle › di-copper center containing domain from catechol oxidase › Di-copper center containing domain from catechol oxidase 0.57 41.0 3.15e-01 77.1% 85.7%
7ru9C01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.56 44.0 3.35e-01 86.7% 40.1%
2bnlC00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.56 42.0 3.96e-01 81.9% 80.6%
2l2oA00 1.10.10.1540 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain 0.56 37.0 4.00e-01 81.0% 83.5%
7dswA01 1.20.1530.20 Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › 0.55 49.0 3.34e-01 100.0% 72.6%
7qx4A01 1.20.190.10 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain 0.55 48.0 3.80e-01 100.0% 55.6%
2kj5A00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.55 41.0 4.04e-01 94.3% 73.3%
1zk8B02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.54 44.0 4.08e-01 87.6% 80.3%
5d0yA00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.54 42.0 3.72e-01 83.8% 72.9%
2v6yA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.52 36.0 4.12e-01 80.0% 100.0%
3sigA00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.52 44.0 3.32e-01 93.3% 65.7%
2ntxA01 1.20.58.2010 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › PRONE domain, subdomain 1 0.52 43.0 3.43e-01 89.5% 54.8%
2f33A03 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.52 34.0 3.70e-01 73.3% 82.8%
3mkrA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 43.0 3.18e-01 93.3% 78.7%
2xevB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 41.0 3.88e-01 85.7% 83.9%
2b7oA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.51 40.0 2.84e-01 84.8% 97.6%
2w9zA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.50 36.0 3.34e-01 75.2% 58.6%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3237792 101.35.1.0 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.72 47.0 5.52e-01 76.2% 93.3%
3790538 5067.1.1.3 ↗ alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Patched 0.61 42.0 3.20e-01 70.5% 44.9%
3326616 2498.1.1.101 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › PF30221 0.61 51.0 3.89e-01 91.4% 95.6%
3594061 593.1.1.0 ↗ alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like 0.58 45.0 3.43e-01 81.9% 40.8%
4982919 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.58 41.0 4.00e-01 72.4% 72.2%
3517993 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 47.0 3.97e-01 91.4% 72.6%
4549291 146.1.1.3 ↗ alpha arrays › Di-copper centre-containing domain › Di-copper centre-containing domain › Di-copper centre-containing domain › Hemocyanin_M 0.57 43.0 3.27e-01 81.0% 87.1%
4000134 109.4.1.162 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nup192 0.56 46.0 2.75e-01 90.5% 80.8%
3688231 5069.1.1.0 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes 0.56 49.0 4.31e-01 100.0% 81.2%
3925968 109.4.1.162 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nup192 0.56 47.0 2.66e-01 96.2% 19.8%
3451928 109.4.1.162 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nup192 0.55 45.0 2.59e-01 90.5% 13.7%
4995595 2004.1.1.146 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.55 48.0 3.73e-01 100.0% 68.8%
3812113 109.4.1.162 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nup192 0.55 45.0 2.62e-01 95.2% 17.1%
3245774 7525.1.1.2 ↗ a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_2 0.54 45.0 3.08e-01 92.4% 80.0%
3677690 109.4.1.162 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nup192 0.54 44.0 2.45e-01 92.4% 5.5%
4945161 2484.1.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.54 43.0 3.66e-01 90.5% 94.7%
3209033 109.4.1.401 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NRDE-2 0.53 47.0 2.81e-01 100.0% 79.9%
3692551 149.1.1.1 ↗ alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.53 41.0 2.62e-01 81.0% 70.7%
3183184 109.4.1.162 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nup192 0.53 46.0 2.54e-01 96.2% 8.9%
3916642 192.2.1.56 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › KIF9 0.52 33.0 2.92e-01 100.0% 42.7%
3638984 109.4.1.162 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nup192 0.51 40.0 2.47e-01 85.7% 34.7%
4083434 5069.1.1.53 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › UPF0182 0.51 45.0 3.80e-01 98.1% 77.8%
4153305 192.7.1.68 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › UPF0182 0.51 45.0 3.77e-01 98.1% 76.2%
3175614 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 44.0 3.06e-01 100.0% 95.5%
5050144 4018.1.1.2 ↗ a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P 0.50 44.0 3.68e-01 96.2% 77.8%