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OR050627.1__WIC41407.1__MA9V1_143__00143

Bact-Vir

OR050627.1__WIC41407.1__MA9V1_143__00143

Identity

Accession:
OR050627 ↗
Kingdom:
phage

Quality

70.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-116
PDB
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4b8vA01 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.81 40.0 5.28e-01 75.9% 85.1%
4b8vA02 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.74 39.0 4.86e-01 74.1% 82.2%
2ijlB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 34.0 3.57e-01 97.4% 68.8%
1vg5A00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.53 28.0 3.35e-01 71.6% 78.1%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3811719 101.15.1.9 alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_CERK1_LYK3_4_5 0.63 46.0 4.24e-01 75.0% 100.0%
2124918 101.15.1.1 alpha arrays › HTH › LysM domain › LysM domain › LysM 0.59 45.0 4.22e-01 78.4% 100.0%
5069901 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 34.0 3.77e-01 94.0% 81.1%
3437099 304.7.1.2 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 0.51 36.0 4.02e-01 93.1% 91.5%
3740639 601.3.1.1 alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › Hpt 0.50 37.0 3.45e-01 99.1% 61.4%