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OR050627.1__WIC41434.1__MA9V1_170__00170
Bact-VirOR050627.1__WIC41434.1__MA9V1_170__00170
Identity
- Accession:
- OR050627 ↗
- Kingdom:
- phage
Quality
87.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 32-88
Domain cluster:
rep: LacPavin_0818_WC45_scaffold_65992_prodigal-single.1__X__X__00325__D29-84
CATH (55)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5mj6A03 | 2.60.40.1910 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.67 | 48.0 | 4.35e-01 | 100.0% | 55.0% |
| 5u55A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 41.0 | 3.23e-01 | 100.0% | 32.0% |
| 1vl7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 51.0 | 3.83e-01 | 100.0% | 40.0% |
| 3pjyA00 | 2.60.120.1140 | Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF192 | 0.59 | 50.0 | 3.92e-01 | 100.0% | 96.1% |
| 3gasB02 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 49.0 | 3.52e-01 | 100.0% | 32.1% |
| 5bncB01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 48.0 | 3.57e-01 | 100.0% | 35.6% |
| 5yjlD01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 44.0 | 3.36e-01 | 100.0% | 33.8% |
| 7kfuC01 | 3.100.10.20 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain | 0.58 | 39.0 | 3.63e-01 | 71.9% | 85.3% |
| 2fhqA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 48.0 | 3.73e-01 | 100.0% | 40.7% |
| 3ir9A02 | 3.30.1330.30 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 | 0.58 | 42.0 | 3.40e-01 | 98.2% | 38.3% |
| 6kwzA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.57 | 38.0 | 3.23e-01 | 100.0% | 39.8% |
| 2hhzA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 49.0 | 3.72e-01 | 100.0% | 40.6% |
| 3bu2A02 | 3.30.1940.10 | Alpha Beta › 2-Layer Sandwich › Nucleic acid-binding protein fold › YtpR-like | 0.57 | 33.0 | 3.18e-01 | 87.7% | 44.9% |
| 6rptC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 44.0 | 3.54e-01 | 98.2% | 42.9% |
| 1rfeA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 46.0 | 3.56e-01 | 100.0% | 39.0% |
| 2i02A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 46.0 | 3.53e-01 | 100.0% | 37.9% |
| 1q8mA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 39.0 | 3.17e-01 | 73.7% | 86.0% |
| 2in5A00 | 2.40.360.10 | Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like | 0.56 | 49.0 | 3.39e-01 | 98.2% | 84.1% |
| 2fg9A01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 45.0 | 3.33e-01 | 98.2% | 32.7% |
| 4xtvB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 43.0 | 4.55e-01 | 98.2% | 100.0% |
| 2i51B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 48.0 | 3.36e-01 | 100.0% | 30.4% |
| 3loiA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 42.0 | 3.05e-01 | 100.0% | 29.4% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 43.0 | 4.06e-01 | 100.0% | 71.0% |
| 2hq7B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 47.0 | 3.53e-01 | 100.0% | 38.7% |
| 2f4nB02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.55 | 47.0 | 4.05e-01 | 98.2% | 71.3% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.55 | 47.0 | 3.31e-01 | 98.2% | 38.3% |
| 1ltlA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.55 | 42.0 | 4.44e-01 | 98.2% | 98.0% |
| 2v3sA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 46.0 | 3.98e-01 | 100.0% | 97.9% |
| 6jhpA01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.54 | 40.0 | 2.66e-01 | 86.0% | 45.8% |
| 5gv0A00 | 2.40.160.110 | Mainly Beta › Beta Barrel › Porin › | 0.54 | 48.0 | 3.48e-01 | 100.0% | 70.4% |
| 1ca1A02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.54 | 47.0 | 3.73e-01 | 100.0% | 81.7% |
| 2aq6A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 44.0 | 3.40e-01 | 100.0% | 38.5% |
| 4ccdA03 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.53 | 44.0 | 3.12e-01 | 96.5% | 34.5% |
| 3webA00 | 2.60.40.770 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 40.0 | 3.25e-01 | 89.5% | 90.9% |
| 6phxA01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.53 | 38.0 | 2.48e-01 | 100.0% | 15.1% |
| 3oc4A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 38.0 | 3.19e-01 | 84.2% | 90.8% |
| 3pweA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.52 | 38.0 | 3.17e-01 | 84.2% | 83.7% |
| 1vw4X00 | 2.20.28.120 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › Ribosomal protein L33 | 0.52 | 39.0 | 3.85e-01 | 100.0% | 76.6% |
| 2asfA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 43.0 | 3.42e-01 | 100.0% | 44.0% |
| 2e12A00 | 2.30.30.720 | Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) | 0.52 | 47.0 | 3.99e-01 | 100.0% | 73.1% |
| 1q7hA01 | 3.10.450.120 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 | 0.52 | 37.0 | 3.64e-01 | 80.7% | 67.7% |
| 6z9cA01 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.52 | 45.0 | 3.56e-01 | 100.0% | 54.9% |
| 4n06A01 | 3.100.10.20 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain | 0.52 | 39.0 | 3.51e-01 | 80.7% | 84.1% |
| 5hdwA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.52 | 45.0 | 3.47e-01 | 100.0% | 51.9% |
| 6ptrB01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.51 | 38.0 | 3.23e-01 | 86.0% | 91.2% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.51 | 40.0 | 2.90e-01 | 98.2% | 29.3% |
| 2ot9A01 | 3.10.640.10 | Alpha Beta › Roll › Restriction endonuclease-like alpha-beta roll fold › Restriction endonuclease-like alpha-beta roll domain | 0.51 | 43.0 | 3.16e-01 | 100.0% | 89.8% |
| 7ylrA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 43.0 | 3.61e-01 | 100.0% | 65.7% |
| 4kncA02 | 2.60.120.1380 | Mainly Beta › Sandwich › Jelly Rolls › C-terminal carbohydrate-binding module | 0.51 | 43.0 | 3.51e-01 | 100.0% | 71.8% |
| 6j0qA02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.51 | 42.0 | 3.49e-01 | 100.0% | 51.4% |
| 1dyoA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.50 | 42.0 | 3.19e-01 | 100.0% | 56.4% |
| 1qr4A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 38.0 | 3.47e-01 | 89.5% | 96.6% |
| 4r3dA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 42.0 | 3.25e-01 | 96.5% | 40.1% |
| 4ksnA00 | 6.20.250.80 | Special › Other non-globular › Double Stranded RNA Binding Domain › | 0.50 | 43.0 | 4.12e-01 | 100.0% | 84.6% |
| 2mj6A00 | 3.30.450.250 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.50 | 35.0 | 3.09e-01 | 100.0% | 47.8% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3637393 | 3792.1.1.2 ↗ | beta sandwiches › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › APC1_3rd | 0.75 | 48.0 | 4.07e-01 | 100.0% | 41.1% |
| 3742309 | 3792.1.1.2 ↗ | beta sandwiches › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › APC1_3rd | 0.75 | 47.0 | 4.21e-01 | 100.0% | 46.3% |
| 3785832 | 3792.1.1.2 ↗ | beta sandwiches › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › APC1_3rd | 0.74 | 47.0 | 4.01e-01 | 100.0% | 41.1% |
| 3738959 | 11.1.1.643 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig-like_POM152 | 0.73 | 50.0 | 4.20e-01 | 100.0% | 43.2% |
| 3227025 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.72 | 60.0 | 5.91e-01 | 94.7% | 98.3% |
| 3216210 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.68 | 52.0 | 5.48e-01 | 98.2% | 94.0% |
| 3185712 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 45.0 | 3.54e-01 | 98.2% | 36.8% |
| 3839016 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.60 | 49.0 | 4.75e-01 | 98.2% | 78.5% |
| 3411079 | 3369.1.1.1 ↗ | beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › Lamp2-like_luminal | 0.59 | 51.0 | 3.65e-01 | 100.0% | 84.4% |
| 3602921 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 49.0 | 4.99e-01 | 98.2% | 92.7% |
| 4953913 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.59 | 48.0 | 4.77e-01 | 98.2% | 85.0% |
| 3508717 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 39.0 | 3.76e-01 | 98.2% | 58.6% |
| 3501768 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.58 | 48.0 | 4.54e-01 | 98.2% | 75.7% |
| 3972526 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 48.0 | 4.60e-01 | 100.0% | 94.3% |
| 5046850 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.58 | 48.0 | 4.15e-01 | 98.2% | 58.9% |
| 4086239 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 45.0 | 4.57e-01 | 100.0% | 90.9% |
| 3630527 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 45.0 | 4.35e-01 | 100.0% | 76.9% |
| 3403394 | 3369.1.1.1 ↗ | beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › Lamp2-like_luminal | 0.56 | 48.0 | 3.52e-01 | 100.0% | 84.7% |
| 3098472 | 375.1.1.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_L33 | 0.56 | 44.0 | 4.52e-01 | 100.0% | 91.1% |
| 135648 | 4.1.1.142 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq_1 | 0.56 | 46.0 | 4.40e-01 | 98.2% | 78.5% |
| 2575643 | 4.1.1.8 ↗ | beta barrels › SH3 › SH3 › SH3 › IN_DBD_C | 0.55 | 42.0 | 4.05e-01 | 100.0% | 72.5% |
| 3888324 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 47.0 | 3.83e-01 | 98.2% | 51.4% |
| 1323187 | 219.1.1.38 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C93 | 0.55 | 46.0 | 3.33e-01 | 100.0% | 32.0% |
| 3245678 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 42.0 | 3.28e-01 | 87.7% | 95.6% |
| 3939235 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 41.0 | 3.18e-01 | 87.7% | 95.0% |
| 4526825 | 11.1.1.67 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF525 | 0.53 | 44.0 | 3.50e-01 | 100.0% | 44.0% |
| 3420348 | 4.1.1.306 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N | 0.53 | 40.0 | 4.11e-01 | 100.0% | 89.1% |
| 3508689 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.53 | 40.0 | 3.41e-01 | 89.5% | 98.2% |
| 3502540 | 1.1.1.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › DUF1758 | 0.52 | 46.0 | 3.93e-01 | 98.2% | 81.1% |
| 4618815 | 73.1.1.16 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › Dicty_REP | 0.52 | 44.0 | 3.53e-01 | 98.2% | 96.7% |
| 4948543 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.51 | 44.0 | 3.76e-01 | 98.2% | 60.0% |
| 3881277 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 41.0 | 3.54e-01 | 98.2% | 54.0% |
| 5044524 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 38.0 | 3.35e-01 | 89.5% | 92.4% |
| 5023153 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.51 | 44.0 | 3.46e-01 | 100.0% | 65.6% |
| 3257711 | 11.1.1.223 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ceramidse_alk_C | 0.51 | 39.0 | 3.12e-01 | 89.5% | 95.5% |
| 4942796 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.50 | 43.0 | 3.50e-01 | 98.2% | 50.9% |