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OR062529.1__WIL79521.1__NWUPM118_219__00219

Bact-Vir

OR062529.1__WIL79521.1__NWUPM118_219__00219

Identity

Accession:
OR062529 ↗
Kingdom:
phage

Quality

86.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Phapecoctavirus› Escherichia_phage_vB_EcoM_118_SA_NWU

TaxID: 3051099

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-64
PDB
Domain cluster: rep: ON602738.1__UVX30253.1__S13a_00047__00045__D5-68
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ekhA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 55.0 5.07e-01 100.0% 71.2%
3pe0A03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 52.0 5.20e-01 100.0% 84.4%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 51.0 4.99e-01 100.0% 77.1%
2epdA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 55.0 5.22e-01 100.0% 77.6%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 47.0 4.94e-01 98.4% 90.6%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 52.0 5.07e-01 96.8% 80.9%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 45.0 4.77e-01 91.9% 83.6%
1irxA02 2.30.30.300 Mainly Beta › Roll › SH3 type barrels. › class i lysyl-tRNA synthetase like 0.64 43.0 4.75e-01 95.2% 100.0%
2dk7A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.64 41.0 3.98e-01 74.2% 56.2%
3npfB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 55.0 5.39e-01 98.4% 93.9%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 52.0 4.93e-01 98.4% 78.7%
3nmzD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 55.0 4.99e-01 100.0% 76.2%
1s1nA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 50.0 5.10e-01 98.4% 95.0%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 50.0 5.08e-01 96.8% 96.6%
3apuB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 51.0 3.76e-01 93.5% 64.5%
3ol0B00 6.20.90.30 Special › Other non-globular › SH3 type barrels. › 0.61 33.0 3.87e-01 96.8% 78.0%
2dk3A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 51.0 4.64e-01 100.0% 69.8%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 52.0 5.20e-01 98.4% 95.3%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 49.0 5.09e-01 95.2% 98.3%
3dueA00 3.40.1420.30 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › 0.60 48.0 3.91e-01 91.9% 48.0%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 46.0 4.74e-01 96.8% 91.7%
4dapA01 2.40.50.580 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 42.0 3.98e-01 77.4% 95.0%
1t0hA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 48.0 4.24e-01 95.2% 74.0%
4a53A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.58 45.0 4.58e-01 98.4% 88.7%
2qc5A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 44.0 2.91e-01 88.7% 37.6%
2qeaB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 44.0 3.34e-01 87.1% 71.2%
7apkF01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 44.0 2.85e-01 88.7% 24.4%
2mhdA00 2.40.128.370 Mainly Beta › Beta Barrel › Lipocalin › 0.56 45.0 3.82e-01 91.9% 87.3%
2z4hA01 2.40.128.300 Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain 0.56 43.0 4.01e-01 85.5% 100.0%
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 44.0 3.70e-01 88.7% 56.5%
1mdaH00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 43.0 2.75e-01 90.3% 47.8%
3luuA00 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.55 43.0 3.94e-01 90.3% 87.6%
2dhkA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 46.0 4.04e-01 98.4% 77.0%
4chmB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 45.0 3.74e-01 100.0% 69.4%
3oyyB03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 38.0 3.91e-01 75.8% 100.0%
4jqtA01 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.53 45.0 3.25e-01 100.0% 66.7%
4czxA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 40.0 2.65e-01 87.1% 92.6%
3tc9A02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.53 42.0 2.71e-01 88.7% 88.5%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 44.0 3.65e-01 100.0% 61.3%
6e20A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 43.0 3.54e-01 100.0% 81.8%
3h8lA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 44.0 3.07e-01 93.5% 49.8%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 43.0 3.97e-01 98.4% 81.6%
1a78A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 43.0 3.49e-01 100.0% 79.9%
4iapA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 43.0 3.91e-01 100.0% 89.1%
5x68A00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 43.0 2.70e-01 93.5% 41.6%
2zkmX01 2.30.29.240 Mainly Beta › Roll › PH-domain like › 0.51 42.0 3.04e-01 100.0% 48.5%
6obtA00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.50 40.0 2.74e-01 91.9% 88.4%
4qt6A00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.50 42.0 3.24e-01 100.0% 64.2%
2wkkA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 43.0 3.32e-01 100.0% 69.3%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3476178 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 53.0 4.27e-01 98.4% 41.7%
3256431 4.1.1.360 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.70 50.0 4.59e-01 96.8% 58.7%
3621818 4.1.1.333 ↗ beta barrels › SH3 › SH3 › SH3 › PF29330 0.69 52.0 5.60e-01 98.4% 100.0%
3222147 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 54.0 5.50e-01 100.0% 90.0%
3623890 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.69 54.0 4.90e-01 100.0% 63.5%
3231177 4.1.1.333 ↗ beta barrels › SH3 › SH3 › SH3 › PF29330 0.67 47.0 5.13e-01 96.8% 94.0%
3779830 4.1.1.304 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O 0.67 53.0 4.77e-01 98.4% 62.2%
3556601 4.1.1.304 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O 0.66 54.0 5.34e-01 98.4% 86.2%
3573620 4.1.1.318 ↗ beta barrels › SH3 › SH3 › SH3 › PF26085 0.66 53.0 5.43e-01 95.2% 93.3%
3374228 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 54.0 5.50e-01 100.0% 96.7%
3554995 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 54.0 5.25e-01 100.0% 82.9%
4134876 4.1.1.334 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1, SH3_2 0.65 53.0 3.96e-01 98.4% 34.5%
3510676 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 49.0 4.29e-01 98.4% 53.7%
3554293 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.65 54.0 5.38e-01 98.4% 90.8%
3415045 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.65 53.0 5.12e-01 98.4% 81.4%
3494765 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.65 52.0 3.59e-01 96.8% 25.5%
3702915 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 52.0 5.27e-01 96.8% 93.3%
3636812 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.65 53.0 5.29e-01 100.0% 89.2%
3899828 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.64 52.0 4.84e-01 98.4% 71.2%
4133335 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 50.0 5.05e-01 96.8% 90.0%
3907870 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 52.0 4.89e-01 100.0% 73.4%
3413864 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.64 54.0 4.04e-01 98.4% 37.6%
3521739 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.64 52.0 4.73e-01 98.4% 67.1%
4104114 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.63 50.0 4.99e-01 98.4% 84.6%
3487936 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 50.0 4.90e-01 96.8% 80.0%
3995675 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.63 52.0 5.34e-01 98.4% 98.3%
3513923 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 51.0 4.88e-01 100.0% 77.3%
4003717 4.1.1.50 ↗ beta barrels › SH3 › SH3 › SH3 › MIB_HERC2 0.62 51.0 4.86e-01 100.0% 78.7%
3514453 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.61 51.0 4.88e-01 100.0% 80.0%
3707595 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 47.0 2.68e-01 85.5% 52.2%
3999508 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 52.0 5.10e-01 100.0% 90.0%
3751478 220.1.1.86 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N 0.60 53.0 5.02e-01 100.0% 90.7%
3788776 5.1.4.38 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 0.60 46.0 2.88e-01 83.9% 92.8%
5022448 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 51.0 4.86e-01 100.0% 89.3%
3782145 220.1.1.86 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N 0.58 51.0 4.46e-01 100.0% 82.1%
3868320 4.1.1.65 ↗ beta barrels › SH3 › SH3 › SH3 › 53-BP1_Tudor 0.58 48.0 4.82e-01 98.4% 89.2%
3734385 5.1.4.38 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 0.58 45.0 2.74e-01 85.5% 91.0%
3259583 220.1.1.86 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N 0.58 50.0 4.65e-01 100.0% 86.3%
4434299 5.1.4.163 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vgb_lyase 0.57 45.0 2.93e-01 88.7% 23.7%
3594065 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 43.0 3.34e-01 82.3% 59.3%
3244907 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 47.0 4.25e-01 98.4% 78.9%
3435006 4.1.1.308 ↗ beta barrels › SH3 › SH3 › SH3 › PF31073 0.56 48.0 4.77e-01 100.0% 92.3%
3396958 719.2.1.1 ↗ beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N 0.56 46.0 4.03e-01 95.2% 93.0%
3379658 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.56 44.0 2.76e-01 88.7% 85.7%
3709430 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 45.0 2.82e-01 91.9% 55.9%
3273324 5.1.4.36 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N 0.55 45.0 2.80e-01 98.4% 26.7%
1684039 76.1.1.0 ↗ beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I 0.55 40.0 3.00e-01 79.0% 82.5%
5070586 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.54 40.0 3.32e-01 83.9% 92.8%
4026536 220.1.1.53 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › ISP1_C 0.54 45.0 3.74e-01 100.0% 69.4%
3244836 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 45.0 3.60e-01 100.0% 78.5%
3403184 719.2.1.1 ↗ beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N 0.53 43.0 3.86e-01 98.4% 91.0%
3193239 5.1.4.38 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 0.53 39.0 2.41e-01 83.9% 32.2%
2462227 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.52 44.0 3.57e-01 100.0% 81.2%
4327595 4.1.1.402 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2761 0.52 42.0 3.76e-01 95.2% 72.6%
4027310 73.1.1.0 ↗ beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain 0.51 34.0 2.80e-01 71.0% 68.5%
4936049 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.51 38.0 3.18e-01 83.9% 92.5%
4009736 206.1.1.23 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › HipA_C 0.50 42.0 2.63e-01 96.8% 22.3%
3269422 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.50 39.0 2.69e-01 93.5% 24.8%