←Back to structures
OR067838.1__WLW41300.1__LJIJOHLM_00008__00008
Bact-VirOR067838.1__WLW41300.1__LJIJOHLM_00008__00008
Identity
- Accession:
- OR067838 ↗
- Kingdom:
- phage
Quality
71.0
mean pLDDT
Taxonomy
TaxID: 3041361
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 34-79
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5d1oA02 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.73 | 60.0 | 5.33e-01 | 100.0% | 72.6% |
| 5vmzA03 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.69 | 52.0 | 5.54e-01 | 84.8% | 95.0% |
| 2jiiA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.65 | 44.0 | 2.93e-01 | 71.7% | 81.0% |
| 4dzrA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.64 | 52.0 | 3.61e-01 | 93.5% | 52.8% |
| 2vugA02 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.64 | 51.0 | 4.59e-01 | 100.0% | 70.8% |
| 5b3hC01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.62 | 43.0 | 4.30e-01 | 73.9% | 81.2% |
| 1sr8A02 | 3.30.2110.10 | Alpha Beta › 2-Layer Sandwich › CbiD-like › CbiD-like | 0.62 | 48.0 | 3.37e-01 | 87.0% | 88.9% |
| 1fviA01 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.61 | 49.0 | 4.33e-01 | 100.0% | 74.7% |
| 2rikA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 51.0 | 4.12e-01 | 100.0% | 57.9% |
| 3ztvA01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.58 | 49.0 | 2.94e-01 | 95.7% | 22.9% |
| 6qkgA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 48.0 | 3.66e-01 | 93.5% | 50.5% |
| 1vs0A01 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.58 | 47.0 | 4.14e-01 | 100.0% | 67.1% |
| 3qxfA00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.57 | 45.0 | 2.80e-01 | 95.7% | 30.3% |
| 2a90A02 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.56 | 38.0 | 3.58e-01 | 71.7% | 54.1% |
| 2gaxA00 | 3.40.1490.10 | Alpha Beta › 3-Layer(aba) Sandwich › Bit1 › Bit1 | 0.56 | 47.0 | 3.45e-01 | 97.8% | 76.1% |
| 5oomJ01 | 3.30.1550.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein L11, N-terminal domain › Ribosomal protein L11/L12, N-terminal domain | 0.55 | 39.0 | 3.48e-01 | 73.9% | 72.7% |
| 2zyzC00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.55 | 42.0 | 3.57e-01 | 97.8% | 59.4% |
| 7lzaA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 44.0 | 3.61e-01 | 95.7% | 66.7% |
| 3gbyA00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.53 | 40.0 | 3.06e-01 | 89.1% | 70.1% |
| 4ml1A02 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 42.0 | 3.25e-01 | 97.8% | 56.6% |
| 4kw3A00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.53 | 42.0 | 2.71e-01 | 97.8% | 56.0% |
| 4xijA01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.52 | 42.0 | 3.21e-01 | 100.0% | 63.6% |
| 1kgqA01 | 1.10.166.10 | Mainly Alpha › Orthogonal Bundle › Tetrahydrodipicolinate-N-succinyltransferase; Chain A, domain 1 › Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain | 0.52 | 44.0 | 3.82e-01 | 93.5% | 90.0% |
| 5ul3A01 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.52 | 41.0 | 3.06e-01 | 100.0% | 73.1% |
| 3b73B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 43.0 | 3.54e-01 | 97.8% | 57.3% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3643093 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.69 | 56.0 | 3.67e-01 | 100.0% | 83.0% |
| 3385805 | 308.2.1.0 ↗ | a+b two layers › ClpS-like › Penicillin binding protein ClpS-like domain › Penicillin binding protein ClpS-like domain | 0.66 | 48.0 | 3.95e-01 | 82.6% | 100.0% |
| 4045857 | 4095.1.1.2 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_M+DNA_ligase_A_N | 0.64 | 51.0 | 3.05e-01 | 100.0% | 43.1% |
| 3839168 | 308.2.1.0 ↗ | a+b two layers › ClpS-like › Penicillin binding protein ClpS-like domain › Penicillin binding protein ClpS-like domain | 0.62 | 47.0 | 3.83e-01 | 87.0% | 94.7% |
| 3291392 | 205.1.1.19 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_13 | 0.60 | 51.0 | 4.52e-01 | 100.0% | 98.6% |
| 3597533 | 4357.1.1.0 ↗ | beta barrels › WWE domain › WWE domain › WWE domain | 0.58 | 46.0 | 3.63e-01 | 91.3% | 95.2% |
| None | — | 0.58 | 43.0 | 3.15e-01 | 82.6% | 31.1% | |
| 3235660 | 304.151.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › PF25899 | 0.55 | 43.0 | 3.25e-01 | 89.1% | 45.6% |
| 3270143 | 7579.1.1.35 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › PGAP1 | 0.55 | 43.0 | 2.67e-01 | 95.7% | 78.8% |
| 5073006 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.55 | 38.0 | 2.77e-01 | 78.3% | 56.9% |
| 3840120 | 601.50.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Flagellar cap protein FliD helical bundle domain › Flagellar cap protein FliD helical bundle domain › FliD_C | 0.54 | 42.0 | 2.89e-01 | 91.3% | 77.8% |
| 5022034 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.54 | 36.0 | 2.60e-01 | 73.9% | 53.9% |
| 3267808 | 101.1.2.625 ↗ | alpha arrays › HTH › HTH › winged helix domain › BRWD1_N | 0.53 | 43.0 | 3.57e-01 | 91.3% | 58.8% |
| 4948416 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.51 | 40.0 | 2.98e-01 | 93.5% | 52.8% |