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OR088901.1__WJZ27853.1__MOMMJLID_CDS0045__00045
Bact-VirOR088901.1__WJZ27853.1__MOMMJLID_CDS0045__00045
Identity
- Accession:
- OR088901 ↗
- Kingdom:
- phage
Quality
85.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 27-80
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u89A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.89 | 72.0 | 5.22e-01 | 87.0% | 33.8% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.89 | 72.0 | 6.42e-01 | 87.0% | 64.4% |
| 3zssA02 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.88 | 67.0 | 5.74e-01 | 79.6% | 60.8% |
| 5a0uA01 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.87 | 80.0 | 4.34e-01 | 100.0% | 12.3% |
| 1r9dA01 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.86 | 78.0 | 4.25e-01 | 98.1% | 12.3% |
| 2rklF00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.86 | 69.0 | 7.08e-01 | 87.0% | 96.2% |
| 4fvmA06 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.86 | 65.0 | 6.89e-01 | 85.2% | 91.7% |
| 2crbA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.85 | 65.0 | 5.25e-01 | 85.2% | 45.4% |
| 3ez0C00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.85 | 69.0 | 4.55e-01 | 88.9% | 58.2% |
| 2qywA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.83 | 66.0 | 5.44e-01 | 87.0% | 49.5% |
| 3fxdB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.82 | 63.0 | 6.15e-01 | 85.2% | 75.9% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.82 | 62.0 | 5.94e-01 | 87.0% | 71.0% |
| 3o6xA02 | 1.20.120.1560 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.82 | 67.0 | 4.79e-01 | 88.9% | 32.4% |
| 4adnA01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.78 | 57.0 | 4.94e-01 | 81.5% | 50.6% |
| 4hkaA02 | 1.10.287.3810 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.77 | 62.0 | 6.41e-01 | 88.9% | 94.1% |
| 1ma1A01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.77 | 61.0 | 5.78e-01 | 87.0% | 79.7% |
| 2a26B01 | 4.10.860.10 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain | 0.75 | 53.0 | 5.73e-01 | 77.8% | 93.2% |
| 2y1vA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.72 | 65.0 | 4.42e-01 | 100.0% | 71.4% |
| 8igrI01 | 2.40.270.10 | Mainly Beta › Beta Barrel › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; Domain 6 › DNA-directed RNA polymerase, subunit 2, domain 6 | 0.70 | 57.0 | 3.96e-01 | 88.9% | 77.8% |
| 3kyiA00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.70 | 59.0 | 4.48e-01 | 94.4% | 57.0% |
| 4g12A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.70 | 59.0 | 4.33e-01 | 96.3% | 77.9% |
| 4g3vA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.69 | 52.0 | 3.80e-01 | 85.2% | 63.6% |
| 3e98B00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.68 | 56.0 | 4.06e-01 | 100.0% | 51.7% |
| 2py6A01 | 1.20.1270.160 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.65 | 49.0 | 4.46e-01 | 81.5% | 69.9% |
| 2yqyA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.61 | 49.0 | 3.73e-01 | 88.9% | 73.8% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4977808 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.93 | 70.0 | 6.34e-01 | 83.3% | 61.4% |
| 4972182 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.91 | 67.0 | 6.09e-01 | 77.8% | 60.0% |
| 3966676 | 109.32.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Alkylsulfatase SdsA1 linker domain › Alkylsulfatase SdsA1 linker domain | 0.91 | 64.0 | 5.09e-01 | 74.1% | 40.0% |
| 3884815 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.88 | 71.0 | 4.65e-01 | 87.0% | 22.4% |
| 1128224 | 109.32.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Alkylsulfatase SdsA1 linker domain › Alkylsulfatase SdsA1 linker domain › Alkyl_sulf_dimr | 0.87 | 66.0 | 5.30e-01 | 81.5% | 44.3% |
| 3606138 | 6132.1.1.0 ↗ | alpha bundles › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain | 0.87 | 67.0 | 6.95e-01 | 81.5% | 88.0% |
| 4982250 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.87 | 67.0 | 6.24e-01 | 81.5% | 87.7% |
| 1422930 | 109.32.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Alkylsulfatase SdsA1 linker domain › Alkylsulfatase SdsA1 linker domain › Alkyl_sulf_dimr | 0.87 | 68.0 | 5.46e-01 | 85.2% | 45.5% |
| 4951933 | 3567.1.1.190 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › HisKA | 0.87 | 69.0 | 6.20e-01 | 87.0% | 62.7% |
| 4978312 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.87 | 65.0 | 5.94e-01 | 79.6% | 61.4% |
| 5053661 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.87 | 69.0 | 4.06e-01 | 85.2% | 12.5% |
| 3588719 | 564.1.1.0 ↗ | alpha arrays › N-terminal, cytoplasmic domain of anti-sigma factors › N-terminal, cytoplasmic domain of anti-sigma factors › N-terminal, cytoplasmic domain of anti-sigma factors | 0.86 | 58.0 | 5.44e-01 | 74.1% | 58.5% |
| 3737997 | 4146.1.1.14 ↗ | alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like › Sec5 | 0.86 | 68.0 | 5.22e-01 | 85.2% | 40.9% |
| 5009328 | 150.1.1.207 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › DUF2175 | 0.85 | 68.0 | 5.42e-01 | 87.0% | 44.8% |
| 5050851 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.80 | 67.0 | 4.97e-01 | 90.7% | 40.8% |
| 5041226 | 604.16.1.0 ↗ | alpha bundles › Spectrin repeat-like › Hypothetical membrane protein Ta0354, soluble domain › Hypothetical membrane protein Ta0354, soluble domain | 0.80 | 64.0 | 5.96e-01 | 85.2% | 73.8% |
| 3882378 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.80 | 63.0 | 4.42e-01 | 85.2% | 30.0% |
| 3730200 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.77 | 62.0 | 4.60e-01 | 87.0% | 82.3% |
| 5053257 | 601.28.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like › VPS28 | 0.73 | 50.0 | 4.19e-01 | 75.9% | 41.1% |
| 4230998 | 2004.1.1.429 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 | 0.72 | 60.0 | 3.53e-01 | 90.7% | 32.0% |
| 4624218 | 301.6.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like | 0.65 | 52.0 | 3.61e-01 | 87.0% | 74.3% |
| 3816635 | 219.1.1.79 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core2 | 0.62 | 50.0 | 3.71e-01 | 92.6% | 96.7% |
| 3645744 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.61 | 49.0 | 4.14e-01 | 88.9% | 68.9% |
| 3203288 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.61 | 39.0 | 3.59e-01 | 83.3% | 50.0% |
| 3721864 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.60 | 46.0 | 4.42e-01 | 85.2% | 72.3% |