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OR122687.1__WLI71360.1__CPTAKMECS_058__00058

Bact-Vir

OR122687.1__WLI71360.1__CPTAKMECS_058__00058

Identity

Accession:
OR122687 ↗
Kingdom:
phage

Quality

73.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Demerecviridae› Epseptimavirus› Salmonella_phage_vB_SenS-AKM_ECS

TaxID: 3053880

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-55
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5tuuA00 1.20.140.80 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Transcription factor DP 0.90 60.0 4.27e-01 100.0% 26.4%
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.90 60.0 4.69e-01 100.0% 35.8%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.86 60.0 4.64e-01 100.0% 36.7%
2nvmA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.78 41.0 3.29e-01 78.2% 27.9%
2azeB00 6.10.250.540 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.77 60.0 4.90e-01 85.5% 95.0%
3viqA00 6.10.140.1020 Special › Helix non-globular › Helix Hairpins › 0.71 56.0 4.28e-01 85.5% 41.8%
1i5eA00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.62 45.0 3.12e-01 80.0% 21.2%
3i3lA02 3.30.390.160 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.61 47.0 3.64e-01 83.6% 66.4%
2e55A00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.61 44.0 3.09e-01 85.5% 21.6%
2zihC00 1.10.3630.10 Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like 0.60 44.0 2.81e-01 78.2% 21.9%
2c7yA00 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.60 48.0 2.86e-01 85.5% 14.1%
2qrdE01 3.10.580.10 Alpha Beta › Roll › CBS-domain › CBS-domain 0.57 44.0 3.03e-01 81.8% 69.4%
1ydmB00 3.40.50.10420 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NagB/RpiA/CoA transferase-like 0.52 36.0 2.51e-01 72.7% 30.8%
3pqvC01 3.65.10.20 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › RNA 3'-terminal phosphate cyclase domain 0.52 36.0 2.38e-01 74.5% 56.1%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5011884 3563.1.1.1 ↗ alpha bundles › Twin arginine protein translocation system component TatC › Twin arginine protein translocation system component TatC › Twin arginine protein translocation system component TatC › TatC 0.85 55.0 3.47e-01 100.0% 14.2%
3865493 5001.1.1.5 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 0.81 56.0 3.48e-01 70.9% 16.1%
3877742 5001.1.1.5 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 0.80 57.0 3.52e-01 74.5% 16.0%
3208120 633.23.1.22 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL 0.78 59.0 4.15e-01 92.7% 28.4%
3860270 5001.1.1.5 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 0.77 53.0 3.30e-01 70.9% 14.6%
3791286 304.28.1.9 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Patched 0.75 51.0 2.78e-01 70.9% 85.9%
3560258 7579.1.1.81 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Arb2 0.72 53.0 3.26e-01 78.2% 84.1%
3499881 5001.1.1.0 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.71 61.0 3.66e-01 94.5% 22.3%
3873279 5001.1.1.5 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 0.68 56.0 3.46e-01 87.3% 73.2%
4500042 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.66 59.0 3.44e-01 100.0% 18.9%
3649913 5050.1.1.58 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › NFD4_C 0.66 56.0 3.99e-01 98.2% 31.2%
3501315 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.64 43.0 3.56e-01 70.9% 91.0%
3992603 273.1.1.1 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.62 43.0 2.70e-01 85.5% 14.0%
4012962 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 47.0 3.12e-01 81.8% 20.9%
3652752 7579.1.1.0 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.58 41.0 2.67e-01 74.5% 98.3%
3168821 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.57 39.0 2.44e-01 74.5% 12.4%
3799216 5067.1.1.0 ↗ alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain 0.56 47.0 2.59e-01 98.2% 24.0%
4944735 101.1.2.542 ↗ alpha arrays › HTH › HTH › winged helix domain › ATPase_2 0.54 38.0 3.03e-01 76.4% 48.8%
3581762 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 37.0 2.99e-01 74.5% 65.7%
5051542 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 35.0 2.50e-01 92.7% 21.6%
3448062 109.4.1.1254 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.50 38.0 2.27e-01 83.6% 79.4%