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OR138016.1__WKC55233.1__R21_62__00060
Bact-VirOR138016.1__WKC55233.1__R21_62__00060
Identity
- Accession:
- OR138016 ↗
- Kingdom:
- phage
Quality
74.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Slopekvirus›
Klebsiella_phage_R2_1
TaxID: 3059687
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-88
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ckkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 43.0 | 4.93e-01 | 100.0% | 98.1% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 43.0 | 4.52e-01 | 100.0% | 80.9% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.58 | 39.0 | 4.24e-01 | 100.0% | 88.1% |
| 2k3aA01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.58 | 40.0 | 3.70e-01 | 100.0% | 55.0% |
| 2egcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 42.0 | 4.28e-01 | 100.0% | 78.7% |
| 2eczA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 41.0 | 4.24e-01 | 100.0% | 81.4% |
| 3nqxA02 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.56 | 40.0 | 3.33e-01 | 78.7% | 88.4% |
| 1wfwA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 41.0 | 4.14e-01 | 100.0% | 82.4% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3537417 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 38.0 | 4.58e-01 | 98.7% | 93.3% |
| 3569289 | 4.1.1.118 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_15 | 0.63 | 50.0 | 4.93e-01 | 100.0% | 81.2% |
| 3756676 | 4.1.1.118 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_15 | 0.62 | 48.0 | 4.43e-01 | 100.0% | 64.0% |
| 4839757 | 3820.1.1.2 ↗ | a+b complex topology › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain › Cas9_C | 0.59 | 52.0 | 4.54e-01 | 100.0% | 82.9% |
| 1144785 | 3820.1.1.2 ↗ | a+b complex topology › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain › Cas9_C | 0.59 | 52.0 | 4.67e-01 | 100.0% | 77.4% |
| 4680268 | 3820.1.1.2 ↗ | a+b complex topology › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain › Cas9_C | 0.58 | 50.0 | 4.48e-01 | 100.0% | 73.4% |
| 3708284 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 51.0 | 4.78e-01 | 98.7% | 92.2% |
| 4369821 | 109.4.1.2074 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF25873 | 0.54 | 38.0 | 2.34e-01 | 92.0% | 10.4% |
| 3708550 | 1056.1.1.0 ↗ | a+b two layers › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain | 0.51 | 39.0 | 2.76e-01 | 96.0% | 25.2% |
| 3465061 | 109.4.1.1783 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28660 | 0.50 | 36.0 | 2.62e-01 | 78.7% | 35.6% |
D2
medium
residues 108-158
Domain cluster:
representative