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OR142618.1__WMI31726.1__GBBBJNDB_00023__00023

Bact-Vir

OR142618.1__WMI31726.1__GBBBJNDB_00023__00023

Identity

Accession:
OR142618 ↗
Kingdom:
phage

Quality

93.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Arenbergviridae› Wroclawvirus› Pseudomonas_phage_Callisto

TaxID: 3061955

Cluster

View cluster (66 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-119
PDB
Domain cluster: rep: LacPavin_0818_WC55_scaffold_56344_prodigal-single.1__X__X__00048__D3-131
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qxfA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.87 80.0 6.55e-01 95.7% 68.8%
2p1jA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.81 72.0 6.79e-01 94.8% 84.1%
4okeA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.77 69.0 6.10e-01 94.8% 76.2%
6vddD01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.72 52.0 4.45e-01 95.7% 47.8%
5ce6A01 3.40.350.10 Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain 0.53 48.0 4.30e-01 100.0% 84.8%
3rvaA01 3.40.350.10 Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain 0.52 46.0 4.24e-01 100.0% 81.4%
2i3bA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 45.0 3.86e-01 100.0% 82.5%
ECOD (37)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5024550 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.88 79.0 6.62e-01 94.0% 67.8%
3587075 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.86 78.0 6.76e-01 95.7% 68.8%
3272730 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.84 80.0 6.57e-01 100.0% 64.2%
4959338 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.84 79.0 6.55e-01 98.3% 72.4%
3280151 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.84 78.0 6.51e-01 98.3% 65.9%
3963965 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.83 77.0 6.58e-01 97.4% 72.0%
3088601 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.83 77.0 6.65e-01 98.3% 68.6%
3945113 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.83 75.0 6.37e-01 95.7% 68.3%
4033087 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.83 75.0 5.93e-01 95.7% 53.2%
4103309 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.83 78.0 6.27e-01 100.0% 59.0%
5081301 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.83 77.0 5.16e-01 98.3% 31.5%
4176714 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.83 77.0 6.21e-01 98.3% 60.8%
4640906 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.82 76.0 6.27e-01 98.3% 61.5%
4586442 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.82 76.0 6.00e-01 98.3% 55.5%
4037317 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.82 75.0 6.10e-01 98.3% 59.5%
4432985 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.82 75.0 6.15e-01 98.3% 61.5%
3988496 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.81 73.0 5.85e-01 95.7% 54.0%
5062283 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.81 76.0 6.16e-01 100.0% 64.7%
4052322 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.81 75.0 6.22e-01 98.3% 62.6%
4298195 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.81 75.0 6.09e-01 98.3% 61.0%
3957139 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.80 75.0 6.13e-01 100.0% 61.0%
5007230 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.80 74.0 6.07e-01 98.3% 61.0%
3953516 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.79 74.0 6.14e-01 100.0% 62.6%
3950901 2484.1.1.73 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Rv2179c-like 0.77 68.0 5.95e-01 94.8% 73.5%
3951613 2484.1.1.73 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Rv2179c-like 0.77 68.0 6.01e-01 94.8% 73.9%
3962916 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.77 68.0 6.15e-01 94.8% 81.7%
4102293 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.76 70.0 5.85e-01 100.0% 66.8%
3580193 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.71 54.0 4.45e-01 94.8% 44.9%
4152194 2005.1.1.1 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 0.55 49.0 3.57e-01 100.0% 81.2%
5056948 2004.1.1.100 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NTPase_1 0.53 47.0 4.14e-01 97.4% 84.7%
3810758 2004.1.1.100 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NTPase_1 0.52 47.0 4.02e-01 100.0% 82.7%
5072673 2007.1.5.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like › CCG 0.51 42.0 3.29e-01 94.8% 40.4%
3584379 3091.1.1.1 ↗ a+b complex topology › Myosin VI cargo binding domain › Myosin VI cargo binding domain › Myosin VI cargo binding domain › Myosin-VI_CBD 0.51 32.0 3.35e-01 80.2% 67.3%
5011867 2484.1.1.302 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.51 44.0 3.90e-01 94.8% 98.2%
3263649 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 34.0 3.30e-01 85.3% 60.8%
5035723 2006.1.1.40 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › LNS2_PITM1-3 0.50 33.0 3.45e-01 94.8% 70.9%
4971149 2007.1.5.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like 0.50 43.0 4.33e-01 95.7% 93.9%
D2 high residues 123-175
PDB
Domain cluster: representative
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1n5uA01 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.85 70.0 5.46e-01 92.5% 44.7%
2khmA01 1.10.10.1350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain 0.84 70.0 5.46e-01 96.2% 44.4%
1j78A05 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.80 63.0 6.10e-01 86.8% 75.0%
2g5gX02 1.10.8.760 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Haem-binding uptake, Tiki superfamily, ChaN, domain 2 0.79 62.0 6.03e-01 86.8% 76.3%
6yz2A01 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.78 54.0 4.09e-01 73.6% 33.3%
3fseB02 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.77 58.0 4.10e-01 81.1% 29.2%
1x42A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.76 61.0 5.23e-01 88.7% 60.2%
1is8A01 1.10.286.10 Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › GTP cyclohydrolase I, N-terminal domain 0.75 62.0 5.99e-01 94.3% 91.7%
2hvrA03 1.10.10.1810 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA ligase 0.75 61.0 5.18e-01 96.2% 55.2%
4a17U01 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.75 52.0 4.57e-01 73.6% 55.8%
3sjqC00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.74 57.0 4.90e-01 81.1% 60.0%
3pwfA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.74 57.0 4.16e-01 81.1% 34.4%
2xzmV01 1.10.60.20 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 0.74 48.0 4.64e-01 100.0% 59.0%
3vm9A02 6.10.140.2110 Special › Helix non-globular › Helix Hairpins › 0.74 61.0 5.94e-01 88.7% 89.5%
2rbdA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.73 55.0 3.87e-01 81.1% 28.0%
1sg7A00 1.10.1740.70 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › ChaB 0.73 65.0 5.78e-01 100.0% 80.0%
2ktmA00 1.10.790.10 Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain 0.73 58.0 5.37e-01 88.7% 86.8%
3nymA00 6.10.290.10 Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.72 55.0 4.11e-01 81.1% 36.3%
6ynwH01 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.70 55.0 4.85e-01 88.7% 59.5%
2ewfA02 1.20.1270.310 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.70 56.0 4.84e-01 86.8% 77.8%
4nooB00 1.10.8.1160 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.70 62.0 5.13e-01 100.0% 68.4%
3fkeA01 1.10.8.950 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Filoviridae VP35, C-terminal inhibitory domain, helical subdomain 0.70 51.0 4.64e-01 86.8% 57.7%
1l1lA01 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.70 62.0 3.56e-01 100.0% 84.3%
4f0cA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.69 48.0 3.53e-01 73.6% 34.1%
2gsoA01 3.40.720.10 Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A 0.68 59.0 3.66e-01 94.3% 71.0%
4w4kA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.67 55.0 4.73e-01 88.7% 58.5%
2lw1A00 1.10.287.380 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain 0.67 52.0 4.39e-01 83.0% 70.6%
2lf0A01 4.10.860.10 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain 0.67 50.0 4.85e-01 81.1% 78.3%
3rx6A00 1.20.58.1090 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phage polarity suppression protein monomer 0.67 60.0 4.05e-01 100.0% 31.0%
1m5iA00 1.10.287.450 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.66 55.0 4.28e-01 88.7% 84.8%
2b5dX01 3.20.110.10 Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain 0.66 59.0 3.50e-01 100.0% 83.4%
1zk8B02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.66 50.0 3.85e-01 88.7% 34.8%
2ic6A00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.66 55.0 4.89e-01 88.7% 85.9%
3hl6A02 1.20.58.700 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.65 50.0 3.93e-01 83.0% 77.4%
2ycdA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.65 46.0 3.58e-01 75.5% 38.5%
4xxiA00 1.10.490.20 Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins 0.65 49.0 3.66e-01 86.8% 32.0%
1lrzA03 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 53.0 5.04e-01 88.7% 77.4%
5vjhB03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 42.0 2.78e-01 83.0% 16.9%
1zq3P00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 46.0 4.24e-01 77.4% 61.8%
2e5yA02 1.20.5.440 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain 0.63 45.0 4.88e-01 77.4% 88.9%
2j82A00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.63 52.0 3.55e-01 100.0% 24.9%
4fppB01 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.62 54.0 4.88e-01 94.3% 78.9%
2b1eA01 1.20.58.1150 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 55.0 4.59e-01 96.2% 61.6%
1b5lA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.61 56.0 3.94e-01 100.0% 40.8%
2mpkA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.61 49.0 4.44e-01 94.3% 64.9%
1xjaB00 2.60.120.280 Mainly Beta › Sandwich › Jelly Rolls › Regulatory protein AraC 0.60 53.0 3.77e-01 96.2% 63.6%
3k6hA01 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.58 49.0 3.49e-01 96.2% 61.7%
3u9rB02 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.58 46.0 3.08e-01 100.0% 75.7%
4fcgA00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.57 45.0 2.88e-01 92.5% 27.4%
2ndpA00 4.10.520.10 Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins 0.56 39.0 3.32e-01 77.4% 51.5%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4540106 3396.1.1.3 ↗ extended segments › HIG1 domain family member 1A › HIG1 domain family member 1A › HIG1 domain family member 1A › DUF4481 0.84 73.0 6.32e-01 96.2% 71.2%
3720522 3877.1.1.0 ↗ alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC 0.83 73.0 4.62e-01 98.1% 20.4%
2622460 3396.1.1.1 ↗ extended segments › HIG1 domain family member 1A › HIG1 domain family member 1A › HIG1 domain family member 1A › HIG_1_N 0.82 72.0 6.51e-01 96.2% 77.1%
3761374 3826.1.1.36 ↗ alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Mito_carr 0.80 71.0 5.31e-01 98.1% 46.3%
4648758 194.1.1.1 ↗ alpha complex topology › Serum albumin-like › Serum albumin-like › Serum albumin-like › Serum_albumin 0.79 63.0 4.17e-01 98.1% 22.4%
5030197 601.7.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.78 68.0 4.76e-01 100.0% 79.3%
3930038 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.77 60.0 5.02e-01 90.6% 50.0%
4026684 192.20.1.7 ↗ alpha bundles › Long alpha-hairpin › helical hairpin domain in transcriptional anti-activator ExsD › helical hairpin domain in transcriptional anti-activator ExsD › PF26729 0.77 54.0 4.23e-01 73.6% 41.0%
4950955 1075.5.1.2 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MurJ 0.76 65.0 4.14e-01 96.2% 65.4%
3597447 5076.1.1.0 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier 0.76 66.0 4.11e-01 98.1% 43.7%
3648687 604.12.1.89 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › CDP-OH_P_transf 0.75 53.0 4.31e-01 73.6% 48.4%
3961618 181.1.1.1 ↗ alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N 0.75 60.0 5.75e-01 88.7% 76.7%
4166427 109.4.1.307 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Tho2 0.75 65.0 3.78e-01 98.1% 11.7%
3350746 3291.1.1.89 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › CHD5 0.75 57.0 4.17e-01 81.1% 34.6%
3699581 5076.1.1.1 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.73 62.0 3.95e-01 98.1% 99.6%
5027329 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.72 55.0 4.96e-01 84.9% 64.0%
3242824 5076.1.1.1 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.72 63.0 3.93e-01 98.1% 48.5%
5010597 5058.1.1.99 ↗ alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › DUF373 0.72 60.0 4.37e-01 96.2% 34.3%
4012407 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.72 54.0 5.23e-01 81.1% 71.7%
3599927 5076.1.1.0 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier 0.72 61.0 3.93e-01 98.1% 43.4%
3846955 198.1.1.10 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2, SapB_1, Saposin 0.72 56.0 4.98e-01 96.2% 58.7%
3282601 150.8.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE 0.72 56.0 3.71e-01 88.7% 22.6%
4993414 3563.1.1.1 ↗ alpha bundles › Twin arginine protein translocation system component TatC › Twin arginine protein translocation system component TatC › Twin arginine protein translocation system component TatC › TatC 0.71 57.0 3.70e-01 96.2% 19.2%
3685214 632.18.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 0.71 64.0 5.44e-01 100.0% 71.8%
3260436 5076.1.1.1 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.71 60.0 3.78e-01 98.1% 45.7%
3284592 371.1.1.0 ↗ few secondary structure elements › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 0.70 57.0 4.64e-01 94.3% 47.0%
3265419 1128.1.1.0 ↗ alpha bundles › LYR protein › LYR protein › LYR protein 0.70 57.0 4.89e-01 96.2% 57.5%
4202640 192.6.1.1 ↗ alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain › ATP-synt_DE 0.70 48.0 4.82e-01 71.7% 78.2%
None — 0.70 58.0 3.67e-01 96.2% 18.1%
4677855 5076.1.1.1 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.70 61.0 3.89e-01 98.1% 36.1%
3588971 6026.1.1.0 ↗ alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain 0.70 58.0 5.34e-01 100.0% 72.0%
3941001 5054.1.1.8 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 0.70 53.0 3.27e-01 81.1% 24.3%
3992094 604.39.1.0 ↗ alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters 0.69 55.0 3.76e-01 88.7% 24.7%
3743434 3542.1.1.3 ↗ alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Peptidase_A22B 0.69 54.0 3.47e-01 88.7% 17.1%
3749862 605.1.1.178 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › TMEM215 0.69 48.0 4.63e-01 73.6% 75.0%
3598977 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.69 60.0 5.10e-01 96.2% 70.6%
3643372 3681.1.1.0 ↗ a+b complex topology › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit 0.69 60.0 5.63e-01 96.2% 80.0%
5050755 1075.5.1.0 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter 0.69 58.0 3.63e-01 96.2% 18.3%
3387239 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.68 54.0 4.07e-01 88.7% 37.5%
3570117 375.6.1.2 ↗ few secondary structure elements › Rubredoxin-like › FlhC-like › FlhC-like › PF31275 0.68 58.0 5.59e-01 94.3% 85.0%
3798232 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.68 59.0 4.95e-01 96.2% 58.0%
3470992 4009.1.1.0 ↗ alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins 0.68 54.0 4.39e-01 86.8% 47.0%
3222941 5054.1.1.59 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 0.67 54.0 3.81e-01 94.3% 76.2%
3481083 4177.1.1.0 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.67 56.0 3.65e-01 96.2% 20.5%
5046057 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.66 55.0 5.11e-01 88.7% 73.8%
3284942 5043.1.1.0 ↗ extended segments › Sensor proteins transmembrane domains › Htr2 transmembrane domain-like › Htr2 transmembrane domain-like 0.66 51.0 4.68e-01 96.2% 64.0%
5014452 1075.1.1.0 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain 0.66 53.0 3.61e-01 98.1% 80.9%
4547274 3714.1.1.0 ↗ a+b two layers › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain › Lon-like protease MtaLonC helical domain 0.66 52.0 4.22e-01 88.7% 46.0%
5051613 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.66 50.0 4.01e-01 86.8% 44.1%
4417886 2498.1.1.10 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 0.65 58.0 3.70e-01 96.2% 68.9%
4417777 547.1.1.1 ↗ alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer 0.65 55.0 4.24e-01 98.1% 40.8%
3396771 5054.1.1.8 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 0.65 57.0 3.52e-01 100.0% 82.2%
3973453 192.8.1.0 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.65 50.0 4.37e-01 88.7% 56.2%
3723053 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.64 54.0 3.49e-01 100.0% 28.8%
3680918 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.64 54.0 5.03e-01 94.3% 80.0%
3904078 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.63 46.0 4.24e-01 81.1% 68.5%
3167160 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 52.0 3.02e-01 98.1% 25.3%
4275437 5063.1.1.12 ↗ alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › ApoO 0.61 48.0 4.72e-01 92.5% 81.7%
3188754 5050.1.1.9 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.60 55.0 3.24e-01 100.0% 32.2%
5078584 3567.1.1.0 ↗ a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.59 49.0 4.08e-01 98.1% 53.0%
2984622 3396.1.1.1 ↗ extended segments › HIG1 domain family member 1A › HIG1 domain family member 1A › HIG1 domain family member 1A › HIG_1_N 0.58 48.0 4.48e-01 96.2% 85.5%
4176207 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 48.0 3.40e-01 94.3% 39.3%