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OR142618.1__WMI31794.1__GBBBJNDB_00091__00091

Bact-Vir

OR142618.1__WMI31794.1__GBBBJNDB_00091__00091

Identity

Accession:
OR142618 ↗
Kingdom:
phage

Quality

72.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-105
PDB
Domain cluster: representative
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fd9A03 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.85 58.0 6.90e-01 76.0% 100.0%
3okqA00 1.20.58.1540 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain 0.83 74.0 6.92e-01 96.2% 96.0%
2gtsA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.82 57.0 6.55e-01 73.1% 96.1%
5dqqA01 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.81 52.0 4.79e-01 71.2% 52.3%
3nrxA00 1.20.58.1520 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.80 55.0 5.16e-01 70.2% 61.0%
4cqiA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.78 54.0 5.36e-01 70.2% 73.8%
3r84A00 1.10.287.3490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.77 58.0 6.48e-01 77.9% 100.0%
1wdzA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.77 60.0 4.48e-01 79.8% 36.8%
1avoB00 1.20.120.180 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Proteasome activator pa28, C-terminal domain 0.77 54.0 4.81e-01 71.2% 65.0%
6iknD01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.77 71.0 5.15e-01 100.0% 43.1%
1ciiA01 1.20.250.10 Mainly Alpha › Up-down Bundle › Colicin Ia; domain 1 › Colicin Ia, domain 1 0.76 69.0 4.75e-01 99.0% 39.5%
1yg2A02 6.10.140.190 Special › Helix non-globular › Helix Hairpins › 0.75 52.0 5.55e-01 70.2% 81.1%
1wleA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.75 53.0 5.19e-01 73.1% 66.7%
3icxA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.74 51.0 5.85e-01 70.2% 98.7%
5y06A01 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.74 63.0 4.81e-01 90.4% 64.6%
4mh6A00 1.10.287.1700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.74 59.0 5.14e-01 85.6% 97.5%
4wpeA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.74 66.0 4.80e-01 98.1% 53.8%
6xj1A01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.73 66.0 4.97e-01 99.0% 49.0%
1hciA04 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.72 50.0 4.89e-01 71.2% 64.9%
1x04A00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.71 63.0 5.08e-01 97.1% 55.5%
4lwsA00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.71 55.0 5.65e-01 90.4% 85.0%
1fs0G02 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.70 51.0 5.52e-01 76.9% 92.1%
1jadA00 1.20.1230.10 Mainly Alpha › Up-down Bundle › Phospholipase C Beta; Chain: A › Phospholipase C beta, distal C-terminal domain 0.70 60.0 4.47e-01 91.3% 52.9%
3na7A00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.69 60.0 4.56e-01 97.1% 41.4%
2b5uA02 1.10.287.620 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins 0.69 61.0 5.24e-01 97.1% 64.0%
4adzA00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.69 45.0 4.81e-01 78.8% 77.8%
6bl6B01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.68 56.0 3.97e-01 91.3% 29.1%
2m6bA00 1.20.58.390 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain 0.68 47.0 4.16e-01 81.7% 49.3%
1ykeD00 6.10.280.10 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator complex, subunit Med21 0.68 48.0 4.66e-01 83.7% 66.4%
6r1nA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.68 48.0 4.91e-01 76.9% 75.7%
6vq6G02 1.20.1460.10 Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 0.67 52.0 4.37e-01 83.7% 56.0%
2yf4F00 1.10.3420.10 Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain 0.66 49.0 4.37e-01 76.9% 77.6%
5yixA00 1.10.601.10 Mainly Alpha › Orthogonal Bundle › RNA Polymerase Primary Sigma Factor › RNA Polymerase Primary Sigma Factor 0.65 48.0 3.40e-01 77.9% 77.2%
4ke2A00 6.10.140.1860 Special › Helix non-globular › Helix Hairpins › 0.64 57.0 4.54e-01 95.2% 65.8%
ECOD (46)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3927738 632.8.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 0.89 61.0 6.37e-01 70.2% 76.8%
3508301 5069.1.3.0 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits 0.87 62.0 5.05e-01 73.1% 43.4%
3908132 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.86 73.0 5.27e-01 87.5% 48.4%
3477418 4992.1.1.12 extended segments › RelB-like › RelB-like › RelB-like › LIN9_C 0.83 61.0 6.41e-01 76.0% 93.7%
3175351 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.82 77.0 6.67e-01 99.0% 73.3%
4056770 3922.1.1.339 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › PF27734 0.82 75.0 5.36e-01 99.0% 42.8%
3839497 150.5.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.81 57.0 6.25e-01 73.1% 88.2%
4086306 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.81 75.0 5.68e-01 99.0% 75.1%
3223894 5001.1.1.0 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.80 58.0 4.18e-01 75.0% 30.5%
3318812 192.8.1.248 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › KIF21A_4th 0.80 72.0 6.33e-01 98.1% 76.0%
3970019 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.78 72.0 5.44e-01 99.0% 71.7%
3919840 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.78 64.0 4.97e-01 88.5% 85.0%
3181110 5086.1.1.110 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HisKA 0.77 58.0 6.08e-01 78.8% 88.4%
3693258 604.7.1.1 alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA 0.77 56.0 5.53e-01 76.9% 70.9%
3337008 192.2.1.60 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › KIF21A_4th 0.77 67.0 6.02e-01 94.2% 77.1%
3906191 4323.1.1.1 alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V_ATPase_I 0.76 58.0 5.04e-01 80.8% 53.5%
5048496 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.76 67.0 5.35e-01 99.0% 49.3%
3699468 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.76 69.0 5.51e-01 99.0% 52.0%
4178100 604.1.1.241 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF27734 0.76 67.0 4.94e-01 95.2% 45.9%
5040840 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.76 67.0 4.00e-01 98.1% 13.9%
3810801 632.22.1.139 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › KIF21A_4th 0.76 68.0 6.03e-01 99.0% 72.0%
3241140 2004.1.1.199 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23,SbcC_Walker_B 0.75 54.0 3.27e-01 78.8% 11.8%
4583258 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.73 57.0 3.72e-01 82.7% 19.8%
4001186 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.73 64.0 5.24e-01 95.2% 52.6%
4941675 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.73 66.0 4.22e-01 99.0% 26.6%
5042955 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.73 66.0 4.07e-01 98.1% 17.8%
3784635 4177.1.1.1 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.73 66.0 4.77e-01 98.1% 45.7%
4260979 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.72 61.0 4.45e-01 90.4% 46.8%
4468389 5086.1.1.101 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › SH3BP5 0.71 58.0 5.53e-01 86.5% 76.7%
3404270 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.71 58.0 5.39e-01 86.5% 70.0%
3262220 4177.1.1.1 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.71 63.0 4.57e-01 97.1% 53.2%
3733682 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.71 63.0 4.63e-01 95.2% 59.6%
3889547 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.70 59.0 4.79e-01 99.0% 49.5%
3592972 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.70 62.0 5.07e-01 99.0% 67.2%
3782160 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.69 58.0 4.19e-01 92.3% 40.0%
3740499 4177.1.1.2 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR 0.68 59.0 4.58e-01 94.2% 44.0%
5057328 2004.1.1.87 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.68 60.0 3.99e-01 98.1% 26.8%
3655688 3755.3.1.303 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › KIF21A_4th 0.67 58.0 4.94e-01 97.1% 57.7%
3704098 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.65 56.0 4.78e-01 94.2% 75.9%
3565534 4177.1.1.2 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR 0.65 58.0 4.46e-01 100.0% 55.5%
5073876 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.65 57.0 3.77e-01 99.0% 24.5%
3829282 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.64 51.0 4.72e-01 86.5% 65.9%
3656716 3755.3.1.498 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › PF31016 0.64 55.0 4.94e-01 95.2% 83.4%
3925257 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.64 55.0 4.66e-01 97.1% 61.1%
3758589 4177.1.1.4 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › IMD 0.61 53.0 4.04e-01 91.3% 87.1%
3687766 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.60 51.0 4.10e-01 97.1% 55.6%