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OR142618.1__WMI31831.1__GBBBJNDB_00128__00128
Bact-VirOR142618.1__WMI31831.1__GBBBJNDB_00128__00128
Identity
- Accession:
- OR142618 ↗
- Kingdom:
- phage
Quality
82.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Arenbergviridae›
Wroclawvirus›
Pseudomonas_phage_Callisto
TaxID: 3061955
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-96
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fcwA00 | 1.20.81.10 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › RAP domain | 0.82 | 58.0 | 5.34e-01 | 72.1% | 59.4% |
| 4adzA00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.80 | 57.0 | 5.68e-01 | 74.4% | 74.4% |
| 2e9xA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.77 | 53.0 | 4.62e-01 | 70.9% | 50.0% |
| 6bl6B01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.77 | 52.0 | 3.48e-01 | 72.1% | 19.0% |
| 4dciA00 | 6.10.140.1110 | Special › Helix non-globular › Helix Hairpins › | 0.77 | 53.0 | 4.35e-01 | 70.9% | 47.6% |
| 1a36A04 | 1.10.132.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.73 | 55.0 | 4.42e-01 | 82.6% | 41.7% |
| 1nfvA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.72 | 50.0 | 3.96e-01 | 74.4% | 36.7% |
| 3r84A00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.70 | 48.0 | 4.98e-01 | 70.9% | 75.3% |
| 1s3qG00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.70 | 50.0 | 4.03e-01 | 75.6% | 39.3% |
| 1iipA02 | 1.10.150.160 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.70 | 49.0 | 4.92e-01 | 72.1% | 76.5% |
| 2ke4A00 | 6.10.140.470 | Special › Helix non-globular › Helix Hairpins › | 0.62 | 43.0 | 4.13e-01 | 70.9% | 64.3% |
| 2uv8A07 | 6.10.140.1410 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 41.0 | 4.20e-01 | 73.3% | 71.8% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4930709 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.90 | 63.0 | 4.65e-01 | 72.1% | 31.8% |
| 3269590 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.87 | 60.0 | 5.37e-01 | 70.9% | 53.9% |
| 3595707 | 5086.1.1.118 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › BBS2_hp | 0.85 | 59.0 | 5.03e-01 | 70.9% | 47.7% |
| 3256134 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.85 | 57.0 | 5.02e-01 | 74.4% | 49.2% |
| 3484742 | 3922.1.1.197 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › BBS2_hp | 0.85 | 59.0 | 5.95e-01 | 70.9% | 72.9% |
| 3929349 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.85 | 58.0 | 4.29e-01 | 70.9% | 30.2% |
| 5030938 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.85 | 58.0 | 4.74e-01 | 70.9% | 42.0% |
| 3232850 | 3684.1.1.48 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › BBS2_hp | 0.84 | 58.0 | 5.59e-01 | 70.9% | 65.3% |
| 3595002 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.83 | 57.0 | 5.44e-01 | 70.9% | 76.0% |
| 4944766 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.82 | 56.0 | 4.15e-01 | 70.9% | 30.2% |
| 3560590 | 3755.3.1.142 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › FAM186A-B_C | 0.81 | 55.0 | 4.55e-01 | 70.9% | 41.3% |
| 3626769 | 192.5.1.14 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA | 0.80 | 55.0 | 5.46e-01 | 70.9% | 68.9% |
| 4017817 | 3922.1.1.229 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Cep57_MT_bd | 0.80 | 55.0 | 4.62e-01 | 70.9% | 44.3% |
| 3569669 | 4177.1.1.2 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR | 0.80 | 58.0 | 4.42e-01 | 76.7% | 67.2% |
| 3578025 | 632.8.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 | 0.78 | 55.0 | 4.86e-01 | 72.1% | 57.5% |
| 3852832 | 3922.1.1.72 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › FAM186A-B_C | 0.78 | 54.0 | 4.41e-01 | 70.9% | 41.3% |
| 4157008 | 3755.3.1.142 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › FAM186A-B_C | 0.77 | 53.0 | 4.39e-01 | 70.9% | 42.8% |
| 3595877 | 192.4.1.0 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) | 0.77 | 63.0 | 5.51e-01 | 86.0% | 76.7% |
| 3567670 | 192.5.1.14 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA | 0.76 | 52.0 | 5.19e-01 | 70.9% | 68.9% |
| 3903422 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.75 | 51.0 | 4.56e-01 | 70.9% | 50.8% |
| 4219218 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.73 | 50.0 | 4.62e-01 | 70.9% | 68.2% |
| 4184330 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.71 | 52.0 | 4.95e-01 | 76.7% | 74.0% |
| None | — | 0.70 | 48.0 | 4.20e-01 | 70.9% | 63.1% | |
| 3170139 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.68 | 63.0 | 5.12e-01 | 100.0% | 63.2% |
| 3750261 | 192.8.1.421 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › DUF4745 | 0.68 | 47.0 | 4.02e-01 | 72.1% | 45.2% |
| 3758640 | 192.29.1.138 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › TMEM127 | 0.68 | 46.0 | 4.06e-01 | 70.9% | 51.5% |
| 3530722 | 4177.1.1.150 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › DUF4745 | 0.67 | 46.0 | 3.97e-01 | 72.1% | 45.2% |
| 4832964 | 192.4.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 | 0.67 | 53.0 | 4.76e-01 | 87.2% | 71.5% |
| 3654912 | 192.4.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 | 0.66 | 53.0 | 4.71e-01 | 87.2% | 68.0% |
| 2106300 | 192.4.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29 | 0.66 | 53.0 | 4.70e-01 | 87.2% | 69.7% |
| 4029165 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.64 | 44.0 | 2.84e-01 | 72.1% | 14.8% |
| 4022294 | 1025.1.1.0 ↗ | alpha bundles › Stonustoxin helical domain › Stonustoxin helical domain › Stonustoxin helical domain | 0.63 | 44.0 | 4.20e-01 | 75.6% | 61.0% |
| 3495806 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 55.0 | 3.33e-01 | 97.7% | 57.2% |
| 4974154 | 150.1.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Ferritin | 0.61 | 42.0 | 3.36e-01 | 76.7% | 36.5% |