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OR142618.1__WMI31898.1__GBBBJNDB_00195__00195
Bact-VirOR142618.1__WMI31898.1__GBBBJNDB_00195__00195
Identity
- Accession:
- OR142618 ↗
- Kingdom:
- phage
Quality
74.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Arenbergviridae›
Wroclawvirus›
Pseudomonas_phage_Callisto
TaxID: 3061955
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-67
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1svdM00 | 3.30.190.10 | Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit | 0.77 | 68.0 | 5.52e-01 | 96.7% | 54.6% |
| 3glkA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.75 | 52.0 | 5.28e-01 | 95.0% | 74.6% |
| 4cgyA03 | 2.70.20.10 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 | 0.74 | 66.0 | 5.15e-01 | 100.0% | 98.4% |
| 1rylA00 | 3.40.1760.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical protein yfbM fold › YfbM-like super family | 0.68 | 56.0 | 4.10e-01 | 90.0% | 100.0% |
| 4dixA01 | 2.60.40.2700 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.66 | 46.0 | 4.09e-01 | 93.3% | 50.6% |
| 2ypyA00 | 3.30.70.390 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Epstein Barr virus nuclear antigen-1, DNA-binding domain | 0.64 | 53.0 | 4.18e-01 | 96.7% | 67.9% |
| 5d4nC00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 54.0 | 4.69e-01 | 100.0% | 91.8% |
| 2byeA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.62 | 52.0 | 4.43e-01 | 98.3% | 56.4% |
| 2h6uA00 | 2.60.40.180 | Mainly Beta › Sandwich › Immunoglobulin-like › Transthyretin/hydroxyisourate hydrolase domain | 0.62 | 49.0 | 4.02e-01 | 95.0% | 46.5% |
| 1s7hA02 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 49.0 | 4.51e-01 | 95.0% | 96.3% |
| 4kg8A00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 47.0 | 3.74e-01 | 93.3% | 41.1% |
| 3dfeA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 50.0 | 4.61e-01 | 100.0% | 97.6% |
| 2c4xA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 50.0 | 3.81e-01 | 100.0% | 39.1% |
| 1y6kR01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 49.0 | 4.23e-01 | 100.0% | 82.4% |
| 4ewtA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 45.0 | 3.79e-01 | 91.7% | 95.7% |
| 3bn6A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 47.0 | 3.62e-01 | 98.3% | 57.0% |
| 6julA02 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.57 | 47.0 | 4.16e-01 | 98.3% | 65.6% |
| 5xbfA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.56 | 43.0 | 3.91e-01 | 100.0% | 59.8% |
| 3zn4A00 | 2.60.120.1180 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 49.0 | 3.68e-01 | 98.3% | 77.2% |
| 2pbzA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.56 | 42.0 | 3.05e-01 | 81.7% | 75.1% |
| 3shsA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 47.0 | 3.84e-01 | 100.0% | 56.1% |
| 2e26A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 46.0 | 3.27e-01 | 96.7% | 40.7% |
| 1u8sA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 45.0 | 4.13e-01 | 98.3% | 100.0% |
| 3nd1A02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.54 | 46.0 | 3.82e-01 | 96.7% | 86.4% |
| 8dkuA02 | 2.70.50.60 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › abc- transporter (atp binding component) like domain | 0.53 | 45.0 | 3.48e-01 | 100.0% | 41.5% |
| 2j58A03 | 3.30.1950.10 | Alpha Beta › 2-Layer Sandwich › wza like fold › wza like domain | 0.53 | 42.0 | 3.96e-01 | 96.7% | 98.8% |
| 3qjoA02 | 2.60.310.10 | Mainly Beta › Sandwich › Hemocyanin; Chain: A, domain 2 › Haemocyanin C-terminal domain | 0.53 | 43.0 | 3.67e-01 | 98.3% | 61.6% |
| 4e9kA00 | 2.60.120.1350 | Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF4465 | 0.52 | 41.0 | 2.82e-01 | 95.0% | 22.5% |
| 2rilA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 43.0 | 3.74e-01 | 95.0% | 92.6% |
| 2pttB00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 40.0 | 3.54e-01 | 98.3% | 63.0% |
| 1o4yA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 41.0 | 2.78e-01 | 98.3% | 48.5% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4095920 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.76 | 65.0 | 5.13e-01 | 95.0% | 100.0% |
| 4106730 | 264.2.1.1 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac | 0.71 | 62.0 | 4.79e-01 | 98.3% | 100.0% |
| 3691174 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.70 | 59.0 | 4.75e-01 | 100.0% | 47.5% |
| 4318011 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.70 | 60.0 | 4.80e-01 | 98.3% | 100.0% |
| 3372777 | 11.1.1.218 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › SCAB-Ig | 0.68 | 48.0 | 4.10e-01 | 96.7% | 43.8% |
| 4217761 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.68 | 58.0 | 5.38e-01 | 98.3% | 100.0% |
| 3718180 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.67 | 57.0 | 4.93e-01 | 96.7% | 92.6% |
| 5014007 | 3115.2.1.0 ↗ | a+b two layers › GP2-like › GP2 › GP2 | 0.66 | 50.0 | 5.12e-01 | 96.7% | 92.7% |
| 4961191 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.65 | 54.0 | 4.24e-01 | 96.7% | 47.4% |
| 4957983 | 11.1.4.23 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg | 0.64 | 53.0 | 4.47e-01 | 96.7% | 64.5% |
| 4930471 | 304.4.1.79 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › MCR_D | 0.63 | 52.0 | 4.52e-01 | 96.7% | 89.0% |
| 3190394 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.63 | 53.0 | 4.42e-01 | 100.0% | 55.3% |
| 5029123 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.62 | 52.0 | 4.64e-01 | 96.7% | 94.4% |
| 5033229 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.62 | 51.0 | 4.56e-01 | 96.7% | 94.4% |
| 4971803 | 304.56.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 | 0.61 | 50.0 | 4.64e-01 | 95.0% | 92.5% |
| 3941016 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.61 | 53.0 | 4.11e-01 | 100.0% | 45.2% |
| 5028999 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.60 | 51.0 | 4.45e-01 | 100.0% | 87.0% |
| 1944061 | 11.1.1.279 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TarS_C1 | 0.59 | 48.0 | 3.73e-01 | 100.0% | 40.0% |
| 3214302 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 50.0 | 4.14e-01 | 100.0% | 62.6% |
| 3250775 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.58 | 49.0 | 3.97e-01 | 100.0% | 48.4% |
| 3935385 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.58 | 49.0 | 4.08e-01 | 100.0% | 70.8% |
| 2080145 | 221.1.1.76 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_2 | 0.57 | 44.0 | 3.90e-01 | 100.0% | 55.9% |
| 4008166 | 3115.1.1.10 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › PF27430 | 0.57 | 46.0 | 4.08e-01 | 95.0% | 67.4% |
| 5041452 | 303.1.1.1 ↗ | a+b four layers › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases › PvlArgDC | 0.57 | 47.0 | 3.61e-01 | 98.3% | 90.2% |
| 5053819 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.56 | 47.0 | 3.26e-01 | 100.0% | 35.7% |
| 3994441 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.56 | 48.0 | 3.89e-01 | 100.0% | 50.8% |
| 2393526 | 4020.1.1.1 ↗ | a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › Aminotran_4 | 0.55 | 39.0 | 3.24e-01 | 78.3% | 87.5% |
| 4945976 | 302.4.1.1 ↗ | a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.54 | 43.0 | 3.55e-01 | 91.7% | 71.7% |
| 3312666 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.54 | 40.0 | 3.90e-01 | 91.7% | 72.9% |
| 3493644 | 10.32.1.203 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin | 0.53 | 43.0 | 3.30e-01 | 98.3% | 70.9% |
| 4025451 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.53 | 42.0 | 3.24e-01 | 93.3% | 87.3% |
| 1158445 | 10.32.1.45 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4465 | 0.52 | 41.0 | 2.82e-01 | 95.0% | 22.5% |
| 4962193 | 302.4.1.1 ↗ | a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.52 | 43.0 | 3.72e-01 | 100.0% | 69.5% |
| 3784545 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 42.0 | 3.34e-01 | 100.0% | 58.6% |
| 5009745 | 302.4.1.1 ↗ | a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.51 | 42.0 | 3.58e-01 | 100.0% | 65.2% |
| 3887913 | 223.2.1.40 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DENN | 0.51 | 39.0 | 2.90e-01 | 80.0% | 71.0% |
| 3472406 | 5.1.12.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › PERK and Ire1 luminal domains | 0.51 | 42.0 | 2.82e-01 | 100.0% | 20.0% |
| 4648475 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.51 | 39.0 | 3.95e-01 | 91.7% | 95.0% |