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OR142618.1__WMI31907.1__GBBBJNDB_00204__00204

Bact-Vir

OR142618.1__WMI31907.1__GBBBJNDB_00204__00204

Identity

Accession:
OR142618 ↗
Kingdom:
phage

Quality

85.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Arenbergviridae› Wroclawvirus› Pseudomonas_phage_Callisto

TaxID: 3061955

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 15-101
PDB
Domain cluster: rep: S2_018_000_R2_scaffold_9_prodigal-single.1__X__X__00147__D4-72
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3vsfA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.64 45.0 3.89e-01 73.6% 100.0%
1upsA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.64 45.0 3.98e-01 74.7% 99.2%
2fdbN00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.62 43.0 3.63e-01 72.4% 87.2%
5g56A03 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.61 42.0 3.73e-01 71.3% 100.0%
2od6C00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 46.0 4.38e-01 87.4% 98.1%
2hzmG01 3.30.310.180 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.56 41.0 3.76e-01 78.2% 87.8%
3zx7A02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.55 44.0 3.88e-01 88.5% 100.0%
2mq8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.55 40.0 3.74e-01 77.0% 89.3%
5ixuA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 41.0 3.94e-01 80.5% 97.1%
1j2vA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 36.0 3.49e-01 73.6% 85.1%
3no8A00 2.60.120.820 Mainly Beta › Sandwich › Jelly Rolls › PHR domain 0.52 37.0 3.11e-01 74.7% 81.5%
1vwxH02 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.52 38.0 3.65e-01 79.3% 100.0%
3mgjA00 3.30.70.2690 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › LOR/SDH bifunctional enzyme, conserved domain 0.51 38.0 3.74e-01 79.3% 97.9%
2mheA00 3.30.70.2400 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Uncharacterised protein PF13773, DUF4170 0.51 36.0 3.84e-01 80.5% 90.5%
1q8kA03 3.30.70.1130 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha 0.51 37.0 3.43e-01 79.3% 82.8%
5yrzA01 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 34.0 3.32e-01 71.3% 89.5%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
185721 3397.1.1.1 ↗ a+b complex topology › Tic22 › Tic22 › Tic22 › Tic22 0.62 41.0 3.72e-01 77.0% 50.0%
5029117 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.57 50.0 4.67e-01 100.0% 95.5%
3448933 304.20.1.1 ↗ a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP_RNA-bind 0.56 41.0 3.77e-01 79.3% 90.0%
5032056 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.55 40.0 3.79e-01 77.0% 89.3%
3831785 304.24.1.0 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.55 39.0 3.81e-01 75.9% 77.0%
4055405 304.25.1.1 ↗ a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer 0.53 38.0 3.39e-01 74.7% 97.6%
5053336 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.53 38.0 3.73e-01 78.2% 94.0%
4927850 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 39.0 3.44e-01 77.0% 57.5%
3945889 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.52 39.0 2.93e-01 81.6% 89.8%
4344924 868.1.1.3 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med20 0.51 37.0 2.88e-01 77.0% 95.2%
3651705 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.51 37.0 3.20e-01 78.2% 56.0%
4666097 212.1.1.0 ↗ a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.51 37.0 2.67e-01 75.9% 89.4%
4153537 304.22.1.1 ↗ a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C 0.50 34.0 3.51e-01 75.9% 75.0%
None — 0.50 43.0 2.89e-01 97.7% 36.2%