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OR142618.1__WMI31938.1__GBBBJNDB_00247__00235

Bact-Vir

OR142618.1__WMI31938.1__GBBBJNDB_00247__00235

Identity

Accession:
OR142618 ↗
Kingdom:
phage

Quality

91.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Arenbergviridae› Wroclawvirus› Pseudomonas_phage_Callisto

TaxID: 3061955

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-70
PDB
Domain cluster: rep: OR521069.1__WNO26786.1__SEA_SCRICK_3__00003__D8-70
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ffgA00 3.30.720.20 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 0.74 60.0 5.59e-01 89.4% 72.5%
3s95A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.72 50.0 4.52e-01 72.7% 87.5%
3tdgA01 3.10.450.520 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.70 51.0 5.17e-01 93.9% 77.3%
3q5zA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.69 48.0 3.91e-01 72.7% 69.4%
2bklA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.69 61.0 3.86e-01 100.0% 49.7%
1yr2A02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.68 60.0 3.80e-01 98.5% 55.6%
1fgyA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 52.0 4.29e-01 84.8% 59.5%
7obmA01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.67 59.0 3.76e-01 98.5% 33.6%
1mruA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.67 47.0 4.19e-01 72.7% 91.3%
2oap101 3.30.450.380 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.67 46.0 3.19e-01 72.7% 59.4%
3iujA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.66 57.0 3.62e-01 97.0% 40.0%
3qc2B00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.66 57.0 3.59e-01 98.5% 40.9%
4qxaB00 2.30.29.230 Mainly Beta › Roll › PH-domain like › 0.65 50.0 3.89e-01 84.8% 37.4%
1s1dA00 2.120.10.100 Mainly Beta › 6 Propeller › Neuraminidase › Apyrase 0.65 56.0 3.58e-01 95.5% 23.7%
1txdA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 50.0 4.14e-01 87.9% 46.3%
6mlyB01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.65 57.0 3.78e-01 98.5% 24.8%
4u6bA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.64 53.0 3.37e-01 92.4% 28.6%
1uypA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.64 55.0 3.67e-01 100.0% 41.7%
4c57B00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.64 57.0 3.62e-01 98.5% 73.1%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.64 50.0 4.09e-01 98.5% 46.7%
4nehA01 2.130.10.130 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal 0.63 53.0 3.35e-01 98.5% 31.0%
6qk7A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 53.0 3.42e-01 100.0% 47.6%
1ei5A03 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.61 48.0 4.23e-01 87.9% 87.3%
2oa9B02 3.30.70.3570 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MvaI/BcnI restriction endonuclease, recognition domain 0.60 46.0 3.78e-01 84.8% 63.0%
2eigA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.60 52.0 3.60e-01 100.0% 65.2%
4mlgG00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.60 47.0 3.07e-01 87.9% 28.7%
5ncsA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.59 42.0 3.39e-01 77.3% 96.4%
2oq1A03 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.59 45.0 3.99e-01 84.8% 80.0%
4jn7A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.59 43.0 3.62e-01 80.3% 45.4%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.59 49.0 4.02e-01 100.0% 47.1%
1rypK00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.58 50.0 3.64e-01 98.5% 68.7%
3kg6C00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.57 43.0 2.87e-01 81.8% 66.4%
2a9sB00 3.90.950.20 Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like 0.57 48.0 3.60e-01 93.9% 81.8%
4dm5A00 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.56 44.0 4.08e-01 93.9% 66.7%
3imoC00 3.30.920.70 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › 0.56 42.0 3.67e-01 89.4% 51.4%
2peeB02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.55 39.0 3.22e-01 77.3% 73.3%
2y23A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 37.0 3.25e-01 71.2% 80.8%
4cy8A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 47.0 3.24e-01 100.0% 50.2%
5t5lA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 46.0 3.24e-01 98.5% 65.5%
2o62A01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 43.0 3.56e-01 90.9% 84.7%
2mdrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 46.0 4.08e-01 95.5% 76.6%
2ns9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 47.0 3.63e-01 100.0% 97.3%
1qmoE01 2.60.40.4220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 39.0 3.65e-01 80.3% 63.1%
3nxpA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.52 36.0 2.73e-01 74.2% 80.2%
2czoA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.51 46.0 3.67e-01 100.0% 72.3%
1b44D00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 39.0 3.45e-01 87.9% 79.2%
1x6oA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 36.0 3.53e-01 80.3% 93.7%
4ntqA00 3.10.380.20 Alpha Beta › Roll › Ribonuclease domain of colicin e3 (Residues 456-551) › Novel toxin 21 (CdiA), C-terminal domain 0.50 36.0 3.50e-01 77.3% 93.4%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3228242 4210.1.1.1 ↗ a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.76 69.0 5.95e-01 100.0% 92.0%
3617983 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.75 63.0 3.77e-01 95.5% 14.4%
4001579 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.73 54.0 4.42e-01 87.9% 44.3%
3799100 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.73 61.0 3.79e-01 98.5% 17.1%
3929846 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.72 60.0 3.81e-01 89.4% 22.1%
3255468 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.72 65.0 4.45e-01 100.0% 48.0%
3218903 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.71 58.0 4.13e-01 98.5% 29.0%
3626089 7579.1.1.3 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9 0.70 61.0 3.48e-01 97.0% 23.4%
3224967 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.69 60.0 4.01e-01 98.5% 25.1%
3915194 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.69 57.0 3.55e-01 97.0% 16.7%
3999890 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.69 60.0 3.72e-01 98.5% 42.8%
5034088 3504.3.1.1 ↗ beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain › NFACT_N 0.68 47.0 3.60e-01 86.4% 31.3%
5013654 5.1.5.11 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PQQ_2 0.67 57.0 3.63e-01 93.9% 28.3%
4059013 5.1.4.481 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BNR, Sortilin-Vps10 0.67 59.0 3.27e-01 100.0% 8.9%
3782550 5.1.7.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 0.66 58.0 3.27e-01 100.0% 23.0%
3706874 5.1.3.243 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_WDR35_2nd 0.66 58.0 3.76e-01 100.0% 68.9%
3613746 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.66 57.0 3.20e-01 97.0% 21.8%
None — 0.66 58.0 3.57e-01 100.0% 28.4%
4132501 5.1.7.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 0.65 57.0 3.11e-01 100.0% 16.1%
3226497 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.65 51.0 4.38e-01 89.4% 54.8%
3798012 883.1.1.2 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C 0.65 48.0 3.27e-01 80.3% 52.5%
3230371 3180.1.1.0 ↗ a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related 0.65 52.0 4.48e-01 90.9% 55.5%
3737480 5.1.7.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 0.65 57.0 3.37e-01 100.0% 36.3%
3841474 206.1.1.20 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.64 58.0 3.72e-01 100.0% 71.5%
3191149 5.1.7.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 0.64 55.0 3.29e-01 100.0% 37.0%
5792 295.1.1.6 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF1818 0.64 50.0 4.07e-01 98.5% 46.3%
185771 3561.1.1.0 ↗ a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 0.63 52.0 3.13e-01 92.4% 12.8%
3440964 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.63 51.0 3.34e-01 90.9% 38.7%
3576886 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.63 56.0 3.57e-01 97.0% 31.3%
3439990 220.1.1.76 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 0.63 46.0 4.19e-01 83.3% 57.8%
4986260 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.63 56.0 3.58e-01 100.0% 68.1%
5057420 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.63 50.0 3.27e-01 87.9% 23.7%
3929256 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.62 51.0 4.05e-01 92.4% 84.3%
3622454 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.62 56.0 3.36e-01 100.0% 64.9%
3866695 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.62 50.0 3.90e-01 92.4% 88.4%
3890928 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.61 50.0 3.70e-01 92.4% 83.3%
3755983 708.1.1.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.59 46.0 4.20e-01 89.4% 73.7%
4179501 292.2.1.4 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Polo_box_2 0.59 44.0 3.68e-01 81.8% 50.8%
3265052 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.59 51.0 3.56e-01 100.0% 57.4%
3930399 4075.1.1.0 ↗ a+b complex topology › RGC domain › RGC domain › RGC domain 0.58 42.0 3.76e-01 78.8% 91.9%
5057564 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.58 49.0 3.82e-01 100.0% 46.3%
3621362 883.1.1.15 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP+LBP_BPI_CETP_C 0.58 43.0 2.70e-01 84.8% 30.4%
119405 3089.1.1.1 ↗ a+b two layers › Integron cassette protein VCH_CASS14 › Integron cassette protein VCH_CASS14 › Integron cassette protein VCH_CASS14 › VCH_CASS14 0.57 43.0 3.69e-01 89.4% 48.2%
4026222 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 45.0 3.48e-01 84.8% 51.7%
3631301 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.57 49.0 3.08e-01 100.0% 74.6%
5035423 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.57 41.0 3.82e-01 75.8% 60.0%
3936894 883.1.1.0 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.56 45.0 3.13e-01 90.9% 58.3%
3789884 883.1.1.0 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.55 45.0 3.06e-01 89.4% 55.7%
5008207 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 45.0 4.31e-01 92.4% 87.5%
3970566 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.54 43.0 3.38e-01 95.5% 40.5%
3870867 331.4.1.0 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.53 44.0 3.69e-01 93.9% 94.2%
4363805 292.2.1.9 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Polo_box_4 0.53 39.0 3.64e-01 89.4% 60.0%
3832069 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.53 40.0 4.11e-01 86.4% 87.7%
3997797 2003.1.5.73 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 0.52 38.0 2.82e-01 98.5% 28.6%
3506845 883.1.1.2 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C 0.51 42.0 2.88e-01 90.9% 68.0%
3420606 298.1.1.0 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.51 45.0 2.84e-01 100.0% 74.7%
3773860 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.51 40.0 2.31e-01 87.9% 96.2%
3179206 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.50 40.0 3.83e-01 89.4% 82.3%
5047074 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.50 42.0 2.70e-01 98.5% 33.0%