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OR142618.1__WMI32023.1__GBBBJNDB_00332__00320

Bact-Vir

OR142618.1__WMI32023.1__GBBBJNDB_00332__00320

Identity

Accession:
OR142618 ↗
Kingdom:
phage

Quality

77.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-76
PDB
Domain cluster: representative
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.81 49.0 5.00e-01 78.7% 63.0%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 49.0 5.54e-01 77.3% 82.1%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.79 49.0 5.66e-01 78.7% 87.0%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 54.0 5.07e-01 81.3% 60.0%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 46.0 5.10e-01 74.7% 78.0%
1vwxM01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.73 46.0 4.41e-01 77.3% 55.3%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 53.0 5.62e-01 78.7% 90.9%
3ic8A01 3.40.30.110 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › 0.68 45.0 3.44e-01 78.7% 29.4%
2l3rA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 50.0 5.10e-01 78.7% 80.8%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 51.0 5.43e-01 96.0% 93.8%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 45.0 4.32e-01 78.7% 61.6%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 43.0 4.46e-01 78.7% 71.8%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 46.0 4.45e-01 77.3% 67.9%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 45.0 4.98e-01 96.0% 95.0%
5zr6A02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.62 45.0 4.56e-01 77.3% 86.8%
3fssA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 43.0 4.17e-01 74.7% 90.7%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.60 40.0 4.04e-01 78.7% 67.5%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.59 42.0 4.31e-01 74.7% 80.3%
1eujA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 41.0 3.19e-01 73.3% 92.1%
3nixB00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 45.0 2.89e-01 86.7% 80.3%
1jb7A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 45.0 3.94e-01 86.7% 75.0%
1gqyB02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.57 41.0 2.96e-01 76.0% 75.6%
4kujA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 45.0 3.70e-01 90.7% 92.7%
3feoB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 46.0 4.54e-01 93.3% 83.1%
1sgoA01 3.30.2280.10 Alpha Beta › 2-Layer Sandwich › copper amine oxidase-like fold › Hypothetical protein (hspc210) 0.56 35.0 3.14e-01 72.0% 44.4%
6ipaA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 39.0 3.08e-01 73.3% 92.7%
6cnhA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 33.0 3.28e-01 84.0% 53.8%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 40.0 3.83e-01 76.0% 96.6%
3u97A00 3.10.450.530 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 0.55 41.0 4.13e-01 80.0% 84.4%
5yjwA00 3.50.50.100 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › 0.55 42.0 2.63e-01 81.3% 57.7%
1u4dA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 40.0 3.88e-01 76.0% 94.0%
2lc4A00 2.30.30.830 Mainly Beta › Roll › SH3 type barrels. › 0.55 38.0 3.31e-01 72.0% 73.0%
2wweA01 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.54 43.0 3.92e-01 86.7% 72.1%
6aqgA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 48.0 3.94e-01 100.0% 58.9%
1xdiA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 46.0 3.35e-01 96.0% 83.0%
2lmcB00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.54 37.0 4.04e-01 73.3% 96.7%
5jk0B01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.54 40.0 3.10e-01 94.7% 34.7%
2h7fX02 3.90.15.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 0.54 40.0 2.87e-01 81.3% 34.9%
5ighA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 35.0 3.41e-01 70.7% 58.0%
1ci3M02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.53 38.0 4.22e-01 77.3% 100.0%
3dorA02 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.53 36.0 3.23e-01 70.7% 82.2%
3ayjA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 44.0 2.82e-01 93.3% 86.5%
1lomA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.52 35.0 3.15e-01 82.7% 50.5%
3jcuO01 2.40.160.30 Mainly Beta › Beta Barrel › Porin › Photosystem II, cytochrome c-550 precursor 0.52 45.0 3.50e-01 100.0% 89.2%
3c96A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 44.0 3.44e-01 96.0% 60.7%
2pi2D00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 43.0 3.65e-01 92.0% 74.8%
1noyA01 3.30.342.10 Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 0.51 35.0 2.91e-01 72.0% 94.0%
2jzjA01 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.51 40.0 3.52e-01 85.3% 92.8%
1w0pA03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 38.0 2.91e-01 81.3% 52.9%
4kh8A01 2.40.128.540 Mainly Beta › Beta Barrel › Lipocalin › Domain of unknown function DUF4822 0.50 39.0 3.11e-01 86.7% 74.1%
1reoA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 42.0 3.46e-01 96.0% 75.0%
2qmiA02 2.40.128.210 Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain 0.50 38.0 3.52e-01 84.0% 62.0%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3924377 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.88 56.0 6.47e-01 77.3% 89.1%
3578208 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.85 53.0 6.22e-01 77.3% 87.3%
3926118 4.1.1.223 beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.77 52.0 5.74e-01 88.0% 86.7%
3932484 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 54.0 5.88e-01 77.3% 87.5%
3928430 4.1.1.223 beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.75 53.0 5.47e-01 90.7% 78.6%
3942573 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 51.0 5.76e-01 96.0% 91.4%
5026824 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 47.0 4.88e-01 78.7% 70.0%
4000858 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 56.0 5.77e-01 80.0% 90.0%
3989574 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 47.0 4.49e-01 77.3% 57.6%
3631298 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 52.0 5.25e-01 77.3% 78.7%
4293453 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 48.0 4.73e-01 78.7% 66.3%
3210707 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.70 52.0 5.73e-01 77.3% 98.3%
3268923 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 51.0 4.50e-01 77.3% 55.2%
4041376 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 48.0 4.75e-01 78.7% 68.8%
5034724 4.1.1.482 beta barrels › SH3 › SH3 › SH3 › DUF4314 0.68 45.0 5.13e-01 72.0% 92.7%
1778160 109.1.1.6 alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_2 0.68 45.0 3.18e-01 78.7% 21.7%
3241890 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 50.0 4.58e-01 85.3% 63.0%
3969569 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.64 40.0 4.36e-01 72.0% 78.3%
3969959 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 54.0 5.03e-01 96.0% 75.6%
4426276 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 46.0 4.80e-01 89.3% 82.9%
3807651 4.1.1.158 beta barrels › SH3 › SH3 › SH3 › DUF3444 0.62 47.0 4.12e-01 80.0% 89.1%
3515762 4.1.1.303 beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.62 45.0 4.53e-01 77.3% 77.3%
3217772 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 54.0 5.15e-01 94.7% 92.9%
5044392 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.61 40.0 4.53e-01 74.7% 92.7%
5044391 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.60 39.0 4.50e-01 77.3% 100.0%
3839768 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.59 40.0 2.61e-01 70.7% 18.9%
3626615 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 44.0 3.85e-01 78.7% 98.2%
5033213 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 48.0 4.09e-01 88.0% 55.0%
3943796 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.59 42.0 4.14e-01 74.7% 71.2%
3403936 241.4.1.1 a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom 0.59 37.0 3.28e-01 72.0% 45.7%
3934170 241.4.1.1 a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom 0.59 36.0 3.35e-01 70.7% 49.5%
3967128 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.57 39.0 4.04e-01 70.7% 78.6%
3388541 241.4.1.1 a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom 0.57 36.0 3.34e-01 72.0% 50.5%
3687350 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 37.0 4.14e-01 86.7% 92.7%
3673266 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 40.0 3.92e-01 77.3% 83.5%
3959531 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 39.0 4.07e-01 80.0% 80.0%
4606688 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.55 39.0 3.95e-01 74.7% 80.0%
4633023 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.55 39.0 3.24e-01 76.0% 43.6%
4066174 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.54 38.0 3.49e-01 76.0% 78.1%
4210722 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.54 40.0 3.69e-01 81.3% 81.0%
3478574 2.1.1.71 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TTC5_OB 0.53 42.0 3.46e-01 90.7% 78.7%
4099964 325.1.7.3 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.53 39.0 4.11e-01 78.7% 92.3%
3897308 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.53 41.0 3.29e-01 86.7% 81.7%
4107506 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.53 39.0 4.13e-01 78.7% 90.8%
4385005 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.53 38.0 3.57e-01 77.3% 91.6%
4492087 325.1.7.3 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.53 38.0 4.07e-01 78.7% 92.3%
4497740 325.1.7.3 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.53 38.0 4.15e-01 77.3% 96.7%
4085772 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.53 38.0 3.83e-01 77.3% 81.3%
4159666 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.53 38.0 3.43e-01 78.7% 54.1%
4065004 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.52 37.0 3.34e-01 76.0% 76.4%
3611989 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.52 41.0 3.38e-01 89.3% 65.3%
4548716 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.52 37.0 3.44e-01 76.0% 82.0%
4622237 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.52 38.0 3.55e-01 77.3% 86.3%
4232558 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.52 38.0 3.49e-01 77.3% 85.0%
3165403 4958.1.1.0 a+b complex topology › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit 0.52 38.0 4.04e-01 78.7% 90.8%
4183857 325.1.7.30 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Peptidase_M23 0.52 38.0 3.84e-01 78.7% 78.7%
4159881 220.1.1.197 beta barrels › PH domain-like › PH domain-like › PH domain-like › PF28623 0.52 43.0 4.09e-01 97.3% 95.8%
4405947 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.52 37.0 3.39e-01 76.0% 80.0%
4537528 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.51 35.0 3.61e-01 84.0% 74.3%
4031599 101.1.2.584 alpha arrays › HTH › HTH › winged helix domain › HrcA 0.51 36.0 3.41e-01 76.0% 80.0%
4127839 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.51 37.0 3.77e-01 78.7% 78.7%
4068978 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.51 37.0 3.77e-01 78.7% 78.7%
3786775 109.54.1.1 alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › Utp12 0.50 40.0 2.44e-01 88.0% 60.6%
4039929 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.50 37.0 3.86e-01 78.7% 93.8%
4435672 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.50 37.0 3.89e-01 78.7% 90.8%
4065841 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.50 36.0 3.39e-01 77.3% 81.1%
4203602 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.50 36.0 3.25e-01 76.0% 81.9%