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OR159654.1__WKW85225.1__SEA_AIKOY__63__00063

Bact-Vir

OR159654.1__WKW85225.1__SEA_AIKOY__63__00063

Identity

Accession:
OR159654 ↗
Kingdom:
phage

Quality

84.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-64
PDB
Domain cluster: representative
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.80 58.0 6.60e-01 88.7% 100.0%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 61.0 5.86e-01 93.5% 79.2%
1vwxT01 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.73 62.0 5.22e-01 90.3% 61.9%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 61.0 5.71e-01 100.0% 77.6%
3ceyB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 56.0 4.34e-01 100.0% 39.7%
1i1jB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 56.0 4.73e-01 91.9% 62.5%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.67 52.0 5.15e-01 91.9% 79.1%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 52.0 4.74e-01 93.5% 65.1%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 55.0 4.97e-01 93.5% 69.0%
4f88102 3.90.1720.60 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.65 54.0 3.74e-01 93.5% 28.2%
3wodG00 2.30.30.1250 Mainly Beta › Roll › SH3 type barrels. › 0.64 50.0 4.01e-01 85.5% 55.1%
4wfvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.64 48.0 3.65e-01 82.3% 45.8%
2vc8A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 51.0 4.90e-01 93.5% 79.2%
4qfwA00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.62 44.0 2.93e-01 75.8% 89.4%
4ikcA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.62 42.0 2.77e-01 71.0% 42.3%
4aqcB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 42.0 3.72e-01 72.6% 89.6%
4c0dB00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.61 52.0 3.72e-01 100.0% 31.4%
2d4rA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 48.0 3.68e-01 87.1% 97.3%
2awnC03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 45.0 4.62e-01 90.3% 87.9%
2hboA01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.60 46.0 3.64e-01 83.9% 75.2%
4c0fC00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.60 52.0 4.31e-01 100.0% 54.5%
4u13A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 46.0 3.89e-01 85.5% 92.7%
8jx6A02 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.60 48.0 4.13e-01 90.3% 100.0%
2l1tA00 2.30.110.70 Mainly Beta › Roll › Pnp Oxidase; Chain A › 0.60 53.0 4.41e-01 100.0% 82.6%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 46.0 4.59e-01 98.4% 81.8%
7qrlA01 2.70.70.10 Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) 0.59 41.0 3.29e-01 75.8% 77.8%
3f1tB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 43.0 3.39e-01 82.3% 77.2%
3a35A02 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.57 43.0 3.86e-01 83.9% 89.1%
2qmiA02 2.40.128.210 Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain 0.57 43.0 3.74e-01 85.5% 52.0%
3tfzB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 44.0 3.32e-01 87.1% 93.3%
2lmcB00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.56 45.0 4.53e-01 88.7% 95.1%
3ulbA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 44.0 4.08e-01 91.9% 94.0%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 43.0 4.35e-01 98.4% 85.7%
3n7cA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 44.0 3.81e-01 93.5% 96.3%
3ewaA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 42.0 2.89e-01 85.5% 83.9%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.55 43.0 3.81e-01 95.2% 56.7%
1t17A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 41.0 3.25e-01 87.1% 95.9%
3rd7A00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.54 42.0 2.76e-01 85.5% 60.7%
1c8uA02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 40.0 3.35e-01 82.3% 80.0%
4bh5A00 2.70.70.10 Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) 0.53 38.0 3.09e-01 77.4% 77.7%
3h6qA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.53 43.0 3.36e-01 100.0% 98.2%
3dlbA04 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.53 36.0 2.73e-01 72.6% 50.3%
2v6eA03 1.10.443.30 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Telomere resolvase 0.53 43.0 3.03e-01 95.2% 28.4%
3i2nA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 45.0 2.88e-01 100.0% 93.0%
3qkgA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 43.0 3.37e-01 100.0% 72.6%
3mtsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 35.0 3.58e-01 87.1% 71.0%
2arzA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 44.0 3.37e-01 95.2% 44.7%
3n7zA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 37.0 3.05e-01 77.4% 59.1%
2hv2A01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 37.0 3.37e-01 79.0% 81.1%
1wi1A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 42.0 3.58e-01 95.2% 76.6%
8aimG01 3.10.450.20 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor 0.52 38.0 3.58e-01 83.9% 80.2%
6j5cA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.52 44.0 4.10e-01 100.0% 78.3%
2vf9A00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.51 35.0 2.90e-01 82.3% 35.1%
4hg1A00 3.40.1580.30 Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › Domain of unknown function (DUF5066) 0.51 40.0 2.75e-01 87.1% 32.0%
3htyA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.51 42.0 3.69e-01 93.5% 77.7%
3zqsA01 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.51 33.0 2.98e-01 77.4% 46.6%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3841414 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.82 68.0 6.55e-01 98.4% 78.6%
3416068 4.1.1.187 beta barrels › SH3 › SH3 › SH3 › DIRP 0.81 65.0 4.72e-01 93.5% 34.2%
3888254 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 55.0 6.37e-01 85.5% 97.8%
4078120 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.79 60.0 6.37e-01 90.3% 90.9%
3781710 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.79 60.0 5.46e-01 90.3% 62.5%
3781440 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.77 65.0 5.97e-01 93.5% 71.2%
3246086 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 65.0 5.51e-01 98.4% 58.9%
3619619 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 63.0 6.04e-01 100.0% 80.0%
5027789 4.1.1.30 beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.75 65.0 5.47e-01 93.5% 74.0%
3669492 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.75 69.0 5.21e-01 100.0% 82.1%
3645395 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.74 68.0 6.17e-01 98.4% 91.3%
1527468 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.74 59.0 4.79e-01 93.5% 47.7%
5012680 4.1.1.30 beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.73 63.0 5.15e-01 93.5% 76.4%
3188712 4.1.1.225 beta barrels › SH3 › SH3 › SH3 › DUF7025 0.73 65.0 5.53e-01 100.0% 76.0%
3868602 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.72 61.0 5.15e-01 91.9% 65.0%
3669494 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.72 66.0 4.89e-01 100.0% 82.7%
3749631 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.72 56.0 4.64e-01 82.3% 64.8%
4596087 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.72 60.0 5.66e-01 93.5% 81.3%
4272564 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.71 61.0 5.02e-01 93.5% 57.4%
2831853 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.71 61.0 4.47e-01 93.5% 39.0%
1793524 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.71 61.0 5.14e-01 93.5% 62.6%
4004815 4.1.1.166 beta barrels › SH3 › SH3 › SH3 › DUF2314 0.70 62.0 4.99e-01 100.0% 59.3%
3598283 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 64.0 4.95e-01 100.0% 60.8%
4398865 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.70 58.0 5.01e-01 90.3% 83.2%
5014885 2.1.1.363 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF2101 0.70 49.0 4.45e-01 72.6% 86.3%
4251101 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 59.0 5.30e-01 93.5% 71.8%
3232582 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 57.0 4.97e-01 93.5% 58.9%
3774803 4.1.1.34 beta barrels › SH3 › SH3 › SH3 › MBT 0.69 61.0 3.76e-01 100.0% 17.2%
3890336 4.1.1.34 beta barrels › SH3 › SH3 › SH3 › MBT 0.69 61.0 3.94e-01 100.0% 22.2%
4572937 4.1.1.34 beta barrels › SH3 › SH3 › SH3 › MBT 0.69 61.0 4.41e-01 100.0% 35.9%
2755606 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.69 61.0 4.08e-01 98.4% 39.6%
3637664 4.1.1.225 beta barrels › SH3 › SH3 › SH3 › DUF7025 0.68 61.0 4.90e-01 100.0% 57.5%
3575581 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.68 59.0 4.36e-01 98.4% 55.2%
3445812 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 58.0 4.42e-01 93.5% 60.0%
4024274 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.68 57.0 4.80e-01 93.5% 59.0%
3492557 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.68 55.0 4.67e-01 93.5% 55.0%
3182025 4.1.1.475 beta barrels › SH3 › SH3 › SH3 › PF26640 0.66 55.0 4.31e-01 93.5% 48.1%
4484974 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 55.0 4.95e-01 93.5% 71.8%
3288884 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 51.0 4.30e-01 85.5% 68.6%
4283343 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 55.0 5.08e-01 93.5% 77.5%
4069560 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 54.0 5.13e-01 93.5% 77.3%
3934655 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 53.0 4.81e-01 91.9% 97.6%
3272363 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.63 53.0 4.64e-01 93.5% 61.1%
3819397 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.63 51.0 4.70e-01 93.5% 68.8%
4358168 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.62 52.0 4.35e-01 93.5% 54.5%
3804236 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 51.0 3.98e-01 93.5% 57.9%
3578918 331.3.1.3 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.60 43.0 3.41e-01 77.4% 80.7%
5060010 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.59 40.0 4.56e-01 80.6% 95.6%
5007378 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.59 42.0 4.45e-01 79.0% 85.5%
3968050 211.1.1.1 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.59 40.0 3.25e-01 71.0% 80.8%
4118552 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.58 43.0 4.12e-01 91.9% 68.0%
4481633 2.4.1.11 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3 0.58 46.0 3.77e-01 90.3% 47.2%
3476018 220.1.1.155 beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26658 0.58 46.0 3.80e-01 91.9% 53.7%
4940436 3414.1.1.0 beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein 0.57 42.0 3.75e-01 83.9% 55.6%
4165306 2.4.1.12 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal 0.56 45.0 3.91e-01 91.9% 56.2%
3328647 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.55 42.0 3.92e-01 93.5% 64.7%
3935357 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 42.0 3.57e-01 90.3% 57.5%
3174293 101.1.2.284 alpha arrays › HTH › HTH › winged helix domain › WAC_Acf1_DNA_bd 0.55 46.0 3.36e-01 98.4% 35.3%
5028870 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.55 38.0 3.78e-01 77.4% 87.1%
4040973 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.54 42.0 4.12e-01 87.1% 78.6%
3632407 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 47.0 3.86e-01 100.0% 78.6%
3918299 4.1.1.376 beta barrels › SH3 › SH3 › SH3 › Chromo_MORC2_6th 0.53 40.0 3.89e-01 90.3% 77.1%
4242808 101.1.8.6 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › ResT-TelK_cat 0.53 41.0 3.50e-01 93.5% 53.3%
4961746 304.8.1.122 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DmsR_N 0.52 43.0 3.65e-01 96.8% 87.8%
2841854 265.1.1.1 a+b two layers › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › Levi_coat 0.52 37.0 2.98e-01 80.6% 35.6%
3739683 220.1.1.20 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.52 41.0 3.54e-01 93.5% 82.7%
3754415 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.50 43.0 3.27e-01 100.0% 74.1%