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OR159654.1__WKW85255.1__SEA_AIKOY__93__00093

Bact-Vir

OR159654.1__WKW85255.1__SEA_AIKOY__93__00093

Identity

Accession:
OR159654 ↗
Kingdom:
phage

Quality

58.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Onyinyevirus› Mycobacterium_phage_Aikoy

TaxID: 3035368

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-77
PDB
Domain cluster: rep: NC_011285.1__YP_002241455.1__TROLL4_41__00041__D3-55
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4irzA01 2.130.10.130 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal 0.65 56.0 3.47e-01 100.0% 68.1%
4pj2A00 2.40.128.460 Mainly Beta › Beta Barrel › Lipocalin › Periplasmic lysozyme inhibitor of I-type lysozyme 0.63 49.0 4.05e-01 83.8% 90.1%
2l2mA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.63 44.0 4.36e-01 76.5% 70.0%
3sreA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.62 46.0 2.94e-01 79.4% 22.5%
4nehA01 2.130.10.130 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal 0.60 51.0 3.18e-01 94.1% 44.4%
1oygA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.59 49.0 3.03e-01 94.1% 34.1%
4dt4A02 2.40.10.330 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.59 32.0 3.48e-01 73.5% 61.4%
6d92A01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.59 49.0 3.47e-01 100.0% 44.3%
6s6yD02 3.30.70.520 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 45.0 3.53e-01 85.3% 86.1%
4h5iB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 47.0 3.13e-01 100.0% 56.2%
3n54B01 6.20.190.10 Special › Other non-globular › Nuclear Transport Factor 2; Chain: A, › Nutrient germinant receptor protein C, domain 1 0.56 41.0 4.28e-01 82.4% 86.9%
2re2A00 3.30.420.130 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain 0.55 47.0 4.00e-01 98.5% 68.6%
4ns4A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 40.0 2.68e-01 79.4% 60.1%
3lxrF00 1.10.4120.20 Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › 0.54 47.0 3.49e-01 100.0% 92.3%
4fwwA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 43.0 2.70e-01 95.6% 35.3%
6x6aA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.53 37.0 2.52e-01 75.0% 21.4%
3rioA01 2.30.24.10 Mainly Beta › Roll › Transcription Regulation, Sacy; Chain A › CAT RNA-binding domain 0.52 41.0 4.11e-01 95.6% 85.3%
1zj8A04 3.30.413.10 Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 0.52 43.0 3.46e-01 97.1% 47.3%
3ebwA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 45.0 3.62e-01 100.0% 76.1%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.51 31.0 3.18e-01 76.5% 62.1%
1x99A00 2.60.270.20 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Cytolysin/lectin 0.51 36.0 2.99e-01 79.4% 39.3%
3f6gA01 3.30.160.740 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 37.0 3.89e-01 85.3% 91.4%
2b5iB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 38.0 3.46e-01 80.9% 77.7%
1wuoA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.51 38.0 2.79e-01 85.3% 41.1%
3bwxA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 38.0 2.57e-01 83.8% 66.0%
1m2xA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.50 37.0 2.74e-01 83.8% 40.6%
3k1lA01 3.30.457.40 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › 0.50 36.0 3.30e-01 76.5% 59.8%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4011588 4325.1.1.0 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like 0.79 55.0 5.31e-01 76.5% 65.3%
3796352 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.66 42.0 4.29e-01 95.6% 67.7%
3592742 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.65 52.0 4.77e-01 88.2% 78.9%
3747707 304.53.1.0 ↗ a+b two layers › Alpha-beta plaits › DOPA dioxygenase-like › DOPA dioxygenase-like 0.64 41.0 3.03e-01 88.2% 25.9%
3401205 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.63 54.0 3.29e-01 95.6% 29.6%
3783916 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.63 38.0 4.14e-01 72.1% 74.5%
5034195 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.63 47.0 5.08e-01 98.5% 98.2%
3299337 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.63 49.0 4.34e-01 83.8% 60.2%
3313861 4325.1.1.10 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF659 0.63 42.0 4.59e-01 75.0% 87.3%
3972840 2484.1.1.9 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.62 52.0 4.73e-01 95.6% 83.2%
3306835 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.62 54.0 3.44e-01 100.0% 75.6%
4026643 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.62 48.0 4.49e-01 85.3% 72.9%
3357725 2484.1.1.165 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.61 53.0 3.31e-01 100.0% 72.1%
3315195 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.61 53.0 3.75e-01 100.0% 35.2%
3804501 2484.1.1.165 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.61 54.0 3.64e-01 100.0% 31.9%
3457030 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.61 53.0 3.82e-01 98.5% 43.0%
3376135 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.61 53.0 3.30e-01 100.0% 19.8%
3953212 2484.1.1.37 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.60 53.0 4.22e-01 97.1% 63.0%
3296792 2484.1.1.165 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.60 52.0 3.35e-01 100.0% 62.5%
3376912 2484.1.1.165 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.60 52.0 3.24e-01 100.0% 71.8%
3434427 2484.1.1.165 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.60 52.0 3.21e-01 100.0% 71.3%
3444325 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.60 52.0 3.84e-01 98.5% 47.6%
3460843 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.60 52.0 3.31e-01 100.0% 83.7%
3221077 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.60 41.0 3.95e-01 76.5% 61.3%
3639482 220.1.1.211 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7612 0.60 44.0 3.49e-01 83.8% 37.9%
3677504 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.60 52.0 4.31e-01 100.0% 67.2%
4126573 2484.1.1.41 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK 0.60 51.0 3.72e-01 100.0% 99.5%
3364681 2484.1.1.165 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.59 51.0 3.17e-01 100.0% 66.0%
3675008 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.59 51.0 3.91e-01 100.0% 49.4%
3335943 2484.1.1.165 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.59 50.0 3.06e-01 100.0% 61.0%
3327916 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.59 51.0 3.27e-01 100.0% 73.0%
3341926 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.59 50.0 4.31e-01 100.0% 73.9%
3677519 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.59 49.0 3.50e-01 98.5% 37.4%
2527953 5.1.2.10 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › DUF1861 0.58 50.0 3.29e-01 100.0% 66.4%
3336766 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.58 50.0 3.32e-01 100.0% 27.7%
3676186 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.57 45.0 4.24e-01 86.8% 84.7%
3683663 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.57 41.0 2.73e-01 89.7% 18.5%
4479389 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.57 37.0 3.13e-01 95.6% 39.1%
3708068 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 45.0 3.10e-01 88.2% 54.1%
3445096 5.1.3.68 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 0.56 47.0 2.98e-01 95.6% 30.6%
3739251 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 45.0 2.69e-01 86.8% 43.0%
3823072 2484.1.1.165 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.56 48.0 2.95e-01 100.0% 60.0%
3294876 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.56 48.0 3.53e-01 100.0% 65.6%
3327232 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.56 46.0 3.09e-01 98.5% 28.2%
3607725 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 48.0 3.00e-01 98.5% 43.5%
4042289 2008.6.1.1 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains › ACC_central 0.55 38.0 2.65e-01 73.5% 99.6%
4275354 2484.1.1.25 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC 0.55 46.0 3.57e-01 94.1% 61.9%
3342974 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.55 45.0 4.17e-01 94.1% 87.8%
3483766 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.54 44.0 3.91e-01 91.2% 61.0%
4547854 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 39.0 3.36e-01 76.5% 72.7%
4268775 330.6.1.1 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.54 45.0 3.83e-01 100.0% 92.0%
3363185 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.54 47.0 3.06e-01 100.0% 66.5%
3679236 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.53 46.0 2.88e-01 100.0% 74.0%
4672300 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.53 35.0 3.07e-01 97.1% 43.8%
3994778 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 41.0 3.40e-01 100.0% 43.9%
4528707 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.53 34.0 2.98e-01 95.6% 40.9%
4099166 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.53 35.0 3.01e-01 97.1% 41.8%
3423399 5.3.1.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › S_locus_glycop 0.53 39.0 3.50e-01 79.4% 78.9%
3881395 101.1.8.12 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › DUF3504 0.52 46.0 3.42e-01 100.0% 54.3%
3421545 5.1.3.68 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 0.52 43.0 2.79e-01 100.0% 66.6%
383967 216.1.1.7 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › FANCL_d1 0.52 36.0 3.32e-01 73.5% 58.9%
3423965 5.3.1.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › S_locus_glycop 0.52 38.0 3.22e-01 79.4% 77.4%
4369732 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.51 38.0 3.24e-01 77.9% 66.4%
5029083 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 43.0 3.41e-01 95.6% 82.0%
3933827 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.51 43.0 3.23e-01 100.0% 71.1%
3600888 11.8.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like 0.51 35.0 2.64e-01 73.5% 30.8%
3199354 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.51 38.0 2.44e-01 82.4% 61.4%