←Back to structures
OR159658.1__WKW85431.1__SEA_MILANI_40__00040
Bact-VirOR159658.1__WKW85431.1__SEA_MILANI_40__00040
Identity
- Accession:
- OR159658 ↗
- Kingdom:
- phage
Quality
65.5
mean pLDDT
Taxonomy
TaxID: 3062837
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 139-184
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zq3P00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.77 | 64.0 | 5.71e-01 | 100.0% | 64.7% |
| 2dn0A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.75 | 62.0 | 5.34e-01 | 100.0% | 57.9% |
| 2djoA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.71 | 59.0 | 4.92e-01 | 100.0% | 51.7% |
| 2da3A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.71 | 57.0 | 5.73e-01 | 100.0% | 95.7% |
| 3iuoA00 | 1.10.10.1390 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ | 0.68 | 55.0 | 4.31e-01 | 100.0% | 40.4% |
| 3mwmA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 52.0 | 4.60e-01 | 100.0% | 70.7% |
| 3kcuD00 | 1.20.1080.10 | Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. | 0.59 | 48.0 | 3.06e-01 | 95.7% | 69.0% |
| 2nogB02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.59 | 48.0 | 4.31e-01 | 97.8% | 78.6% |
| 4kjmA02 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.58 | 38.0 | 3.57e-01 | 84.8% | 56.4% |
| 2qenA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 45.0 | 4.18e-01 | 100.0% | 72.9% |
| 3bhqA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 46.0 | 3.15e-01 | 100.0% | 30.2% |
| 3n0aA01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.56 | 47.0 | 3.19e-01 | 100.0% | 24.9% |
| 1h3zA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 42.0 | 3.25e-01 | 93.5% | 80.6% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3477131 | 101.1.1.227 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_NOL4_2nd | 0.79 | 69.0 | 6.00e-01 | 100.0% | 81.4% |
| 3479013 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 68.0 | 6.14e-01 | 100.0% | 87.7% |
| 3479734 | 197.1.1.0 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like | 0.77 | 65.0 | 4.92e-01 | 100.0% | 42.6% |
| 3267823 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.74 | 58.0 | 5.72e-01 | 100.0% | 84.0% |
| 3308083 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 62.0 | 4.79e-01 | 100.0% | 51.4% |
| 1284299 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.70 | 59.0 | 4.15e-01 | 100.0% | 30.3% |
| 5073910 | 304.103.1.1 ↗ | a+b two layers › Alpha-beta plaits › FMN-dependent nitroreductase-like › FMN-dependent nitroreductase-like › Nitroreductase | 0.65 | 54.0 | 3.44e-01 | 91.3% | 41.5% |
| 5071640 | 3457.1.1.1 ↗ | alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease › Peptidase_A24 | 0.54 | 43.0 | 2.96e-01 | 97.8% | 86.8% |
D2
medium
residues 68-127