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OR159659.1__WKW85516.1__SEA_REYNAULD_64__00064

Bact-Vir

OR159659.1__WKW85516.1__SEA_REYNAULD_64__00064

Identity

Accession:
OR159659 ↗
Kingdom:
phage

Quality

59.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 155-228
PDB
Domain cluster: representative
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3obyA01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.74 67.0 5.85e-01 100.0% 73.4%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.74 53.0 5.40e-01 82.4% 77.8%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.73 52.0 5.37e-01 86.5% 78.9%
1w4sA00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.68 52.0 4.17e-01 82.4% 65.1%
6cnhA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.68 45.0 4.42e-01 83.8% 62.5%
2p4tA00 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.66 49.0 5.34e-01 87.8% 100.0%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 51.0 5.48e-01 93.2% 100.0%
1ci3M02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.66 43.0 4.75e-01 90.5% 84.5%
7tzoA01 1.10.1070.11 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain 0.65 51.0 3.93e-01 85.1% 100.0%
7cceA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.65 53.0 4.22e-01 89.2% 58.9%
3pieB05 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 50.0 5.33e-01 87.8% 98.4%
3ic8A01 3.40.30.110 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › 0.65 50.0 3.78e-01 83.8% 35.0%
2w1zA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.64 50.0 4.10e-01 85.1% 90.1%
3q5zA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.63 50.0 4.24e-01 85.1% 87.6%
4bb7B00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.62 49.0 3.54e-01 89.2% 44.4%
3oxhA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.62 39.0 3.17e-01 82.4% 34.3%
2cztA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 51.0 4.04e-01 91.9% 78.1%
3mp6A05 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 46.0 4.86e-01 94.6% 98.4%
4dsdA00 3.40.1420.30 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › 0.60 42.0 3.55e-01 74.3% 46.8%
3dorA02 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.58 46.0 4.03e-01 83.8% 95.3%
1jnrB02 6.20.260.10 Special › Other non-globular › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Adenylylsulphate reductase, beta subunit, C-terminal domain 0.58 31.0 3.06e-01 90.5% 45.8%
2b4wA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.58 49.0 3.25e-01 91.9% 45.0%
4ebrA00 3.30.1460.50 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.58 48.0 3.74e-01 90.5% 93.0%
1y8tA03 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.57 45.0 4.28e-01 85.1% 96.6%
2cn2A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 51.0 3.20e-01 100.0% 100.0%
1xfsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 49.0 3.88e-01 97.3% 89.6%
2o62A01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 47.0 3.90e-01 91.9% 91.6%
3jcuO01 2.40.160.30 Mainly Beta › Beta Barrel › Porin › Photosystem II, cytochrome c-550 precursor 0.56 46.0 3.56e-01 93.2% 97.2%
3q48A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 44.0 4.30e-01 85.1% 90.4%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 39.0 4.14e-01 77.0% 98.4%
3lhnA00 2.40.128.640 Mainly Beta › Beta Barrel › Lipocalin › 0.56 43.0 3.82e-01 83.8% 84.1%
3itwA02 3.30.720.110 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.55 35.0 3.90e-01 82.4% 83.9%
2qpvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 43.0 3.59e-01 86.5% 84.1%
2xklA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 45.0 3.66e-01 93.2% 89.9%
1lomA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.54 37.0 3.38e-01 90.5% 52.5%
2xg5A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 43.0 4.04e-01 86.5% 89.1%
3l8kA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 47.0 3.94e-01 95.9% 100.0%
2wtzA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.53 46.0 3.22e-01 97.3% 29.9%
2zutA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 33.0 3.68e-01 79.7% 79.7%
2il5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 43.0 3.35e-01 89.2% 79.6%
3zugB02 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.53 45.0 3.74e-01 98.6% 68.3%
3nixB00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 47.0 2.94e-01 100.0% 38.5%
3d30A02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.52 42.0 3.93e-01 89.2% 87.2%
1reoA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 47.0 3.73e-01 100.0% 52.7%
1wznA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.52 37.0 4.17e-01 81.1% 100.0%
3b59A02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.52 34.0 2.76e-01 82.4% 33.1%
6zxfz01 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.51 41.0 3.46e-01 87.8% 90.2%
3fcdB00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.51 34.0 2.99e-01 83.8% 43.7%
1o75A03 2.60.40.1300 Mainly Beta › Sandwich › Immunoglobulin-like › Penicillin-binding protein Tp47, domain C 0.50 40.0 3.39e-01 87.8% 85.9%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3396897 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.79 55.0 5.90e-01 71.6% 98.4%
3959531 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 66.0 6.81e-01 97.3% 95.7%
3741680 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 56.0 6.32e-01 85.1% 100.0%
4931822 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 56.0 5.96e-01 91.9% 86.2%
4605602 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 53.0 5.66e-01 81.1% 84.6%
4271974 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.75 55.0 5.85e-01 86.5% 89.1%
4025829 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 51.0 5.75e-01 74.3% 96.4%
3597255 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 51.0 4.94e-01 74.3% 63.5%
4888987 4.1.1.6 beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C 0.73 52.0 5.38e-01 81.1% 79.7%
2675820 4.1.1.93 beta barrels › SH3 › SH3 › SH3 › 40S_S4_C 0.73 52.0 4.86e-01 81.1% 60.4%
3698762 4.1.1.6 beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C 0.73 53.0 4.75e-01 86.5% 55.3%
3591224 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 47.0 5.48e-01 71.6% 100.0%
3536187 219.1.1.41 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C78 0.72 64.0 5.19e-01 100.0% 80.7%
3660964 4.1.1.6 beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C 0.71 54.0 4.86e-01 98.6% 60.0%
3660358 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 52.0 5.69e-01 86.5% 96.7%
3564972 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 53.0 5.49e-01 93.2% 85.7%
4349149 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 59.0 5.53e-01 93.2% 100.0%
4029199 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 61.0 3.46e-01 98.6% 10.0%
4999741 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 54.0 5.30e-01 89.2% 78.8%
4625348 325.1.7.3 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.68 45.0 4.95e-01 94.6% 83.3%
567 4.1.1.48 beta barrels › SH3 › SH3 › SH3 › DHFR_2 0.67 48.0 5.36e-01 86.5% 100.0%
4129953 325.1.7.3 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.67 43.0 4.59e-01 90.5% 75.4%
3923766 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 56.0 4.87e-01 94.6% 83.5%
3935387 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.65 47.0 3.28e-01 77.0% 29.2%
3701345 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 53.0 5.22e-01 89.2% 98.8%
4093836 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 47.0 5.05e-01 90.5% 100.0%
3703749 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 47.0 4.91e-01 100.0% 89.2%
3549321 4.11.1.5 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24, PF31032 0.64 56.0 4.40e-01 100.0% 48.8%
3238955 4.1.1.377 beta barrels › SH3 › SH3 › SH3 › MSL3_chromo-like 0.63 49.0 4.79e-01 87.8% 80.0%
3212772 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.62 46.0 4.69e-01 85.1% 82.4%
3725498 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 53.0 5.46e-01 95.9% 100.0%
3477683 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.60 50.0 3.29e-01 91.9% 40.3%
4492087 325.1.7.3 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.60 44.0 4.71e-01 87.8% 87.7%
3283490 211.1.1.11 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase_6 0.60 38.0 3.32e-01 83.8% 41.7%
4027502 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 46.0 4.84e-01 87.8% 96.9%
5052931 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 51.0 3.17e-01 93.2% 29.6%
3700781 3794.1.1.0 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.59 47.0 3.92e-01 86.5% 80.0%
3975862 220.1.1.104 beta barrels › PH domain-like › PH domain-like › PH domain-like › Cpta_toxin 0.59 53.0 5.21e-01 97.3% 95.0%
3614740 3794.1.1.0 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.59 49.0 4.06e-01 90.5% 72.3%
3613275 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 46.0 3.68e-01 85.1% 84.8%
5054384 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.58 40.0 4.12e-01 87.8% 74.3%
3734648 11.1.1.668 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TRAPPC13_M 0.58 45.0 3.55e-01 83.8% 91.9%
3717566 5.1.3.28 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.57 49.0 3.32e-01 93.2% 36.1%
3973549 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.57 47.0 3.12e-01 89.2% 29.5%
4544191 211.1.1.1 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.57 35.0 3.88e-01 78.4% 81.8%
3979962 9.1.1.69 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › BigA_N 0.56 44.0 4.20e-01 83.8% 82.4%
167222 391.1.1.1 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › fn1 0.55 32.0 3.44e-01 71.6% 67.2%
5053926 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.55 39.0 3.82e-01 94.6% 68.8%
3929340 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.54 48.0 3.85e-01 98.6% 98.6%
3184702 2003.1.2.91 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like, NAD_binding_8, Pyr_redox_3 0.54 48.0 2.89e-01 100.0% 26.9%
3967405 211.1.1.1 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.54 36.0 3.86e-01 83.8% 86.7%
3871253 220.1.1.122 beta barrels › PH domain-like › PH domain-like › PH domain-like › C2_SHIP1-2_first 0.53 46.0 3.73e-01 95.9% 75.0%
4878518 2003.1.2.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 0.53 48.0 3.82e-01 100.0% 93.2%
4544219 2003.1.5.151 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23, Methyltransf_25 0.53 43.0 3.06e-01 93.2% 80.4%
3601721 223.2.1.9 a+b three layers › Profilin-like › profilin-like › profilin-like › Sedlin_N 0.53 36.0 2.92e-01 70.3% 38.6%
4931666 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 42.0 3.66e-01 90.5% 84.2%
4969674 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 44.0 2.85e-01 93.2% 30.5%
4632722 2003.1.2.16 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.52 46.0 3.21e-01 100.0% 56.1%
4022963 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 43.0 2.70e-01 93.2% 39.8%
3960441 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.52 44.0 3.12e-01 97.3% 85.6%
D2 medium residues 6-148
PDB