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OR159659.1__WKW85517.1__SEA_REYNAULD_65__00065

Bact-Vir

OR159659.1__WKW85517.1__SEA_REYNAULD_65__00065

Identity

Accession:
OR159659 ↗
Kingdom:
phage

Quality

80.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Reynauldvirus› Rhodococcus_phage_Reynauld

TaxID: 3062845

Cluster

View cluster (40 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-85
PDB
Domain cluster: rep: NC_048654.1__YP_009832427.1__HWB09_gp094__00098__D11-80
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 37.0 3.73e-01 100.0% 53.7%
4dovA00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.66 49.0 3.75e-01 79.4% 92.4%
3zqsA01 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.58 43.0 4.02e-01 80.9% 90.9%
1b25A02 1.10.569.10 Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 0.58 46.0 3.59e-01 95.6% 61.2%
2kcdA00 3.10.450.250 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › S. aureus uracil DNA glycosylase inhibitor 0.57 47.0 3.92e-01 92.6% 95.8%
3ztvA02 3.90.780.10 Alpha Beta › Alpha-Beta Complex › 5'-nucleotidase; domain 2 › 5'-Nucleotidase, C-terminal domain 0.55 38.0 2.73e-01 73.5% 31.9%
1b9wA02 2.10.25.10 Mainly Beta › Ribbon › Laminin › Laminin 0.54 32.0 3.67e-01 76.5% 100.0%
5lm7A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 38.0 3.62e-01 73.5% 79.5%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 38.0 3.96e-01 76.5% 100.0%
3c9fA01 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.52 43.0 2.91e-01 100.0% 87.0%
2bwnB01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.52 39.0 3.04e-01 80.9% 86.2%
2k49A00 2.30.29.80 Mainly Beta › Roll › PH-domain like › 0.52 38.0 3.21e-01 77.9% 61.9%
4n9jA02 3.30.1120.130 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.51 34.0 2.96e-01 73.5% 43.9%
5gvyA00 2.100.10.30 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain 0.51 40.0 3.27e-01 91.2% 87.6%
6b9tF01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 36.0 3.01e-01 76.5% 69.6%
1ypzF01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 37.0 3.16e-01 80.9% 58.5%
2fclA00 3.30.460.40 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.50 43.0 3.37e-01 100.0% 64.7%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4349498 387.1.7.0 ↗ few secondary structure elements › omega toxin-like › omega toxin-related › Evasin-3 knottin scaffold 0.63 30.0 3.66e-01 75.0% 67.5%
3833288 1.1.1.28 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_C, TAXi_N 0.58 43.0 2.76e-01 80.9% 86.8%
4456732 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.58 41.0 3.91e-01 75.0% 65.0%
4595815 325.1.7.3 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.57 40.0 4.09e-01 73.5% 81.5%
4435672 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.56 39.0 4.05e-01 76.5% 78.5%
4159666 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.55 38.0 3.34e-01 73.5% 46.8%
4099964 325.1.7.3 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.55 39.0 4.04e-01 76.5% 81.5%
4107506 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.55 38.0 3.93e-01 73.5% 78.5%
4625348 325.1.7.3 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C 0.54 37.0 3.91e-01 75.0% 83.3%
5027131 4.6.1.0 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.54 39.0 4.06e-01 77.9% 100.0%
4652006 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.53 39.0 2.62e-01 79.4% 39.4%
4127839 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.53 38.0 3.69e-01 75.0% 68.0%
3585719 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.53 45.0 3.31e-01 100.0% 45.9%
4039929 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.51 36.0 3.70e-01 75.0% 80.0%
5053669 2003.1.2.300 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GGR_cat 0.51 43.0 2.68e-01 100.0% 38.0%
4944306 316.1.1.1 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PolyA_pol 0.50 43.0 3.27e-01 100.0% 67.4%