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OR159663.1__WKW85970.1__SEA_PHINKBODEN_172__00166
Bact-VirOR159663.1__WKW85970.1__SEA_PHINKBODEN_172__00166
Identity
- Accession:
- OR159663 ↗
- Kingdom:
- phage
Quality
93.5
mean pLDDT
Taxonomy
TaxID: 3062833
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-33
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gsvA00 | 6.10.140.40 | Special › Helix non-globular › Helix Hairpins › | 0.88 | 77.0 | 5.94e-01 | 100.0% | 47.8% |
| 3k8pC02 | 1.10.357.150 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.86 | 73.0 | 4.41e-01 | 96.8% | 15.8% |
| 3k2nA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.86 | 77.0 | 4.68e-01 | 100.0% | 17.5% |
| 4g3vA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.86 | 76.0 | 4.69e-01 | 100.0% | 19.1% |
| 6xxvC00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.85 | 74.0 | 4.96e-01 | 100.0% | 27.9% |
| 6lumD01 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.83 | 71.0 | 4.69e-01 | 100.0% | 24.8% |
| 2v6eA01 | 1.10.287.3180 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.80 | 67.0 | 5.12e-01 | 100.0% | 41.3% |
| 4iaoC01 | 6.10.140.1820 | Special › Helix non-globular › Helix Hairpins › | 0.79 | 61.0 | 5.03e-01 | 100.0% | 47.1% |
| 1zoyD00 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.78 | 64.0 | 4.54e-01 | 100.0% | 30.4% |
| 2yfaA02 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.76 | 59.0 | 4.17e-01 | 100.0% | 26.7% |
| 2glzA00 | 3.30.1330.130 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › | 0.75 | 56.0 | 3.56e-01 | 87.1% | 17.4% |
| 3axjB02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.70 | 54.0 | 4.10e-01 | 93.5% | 45.9% |
| 2l37A00 | 6.10.250.890 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.69 | 50.0 | 4.89e-01 | 100.0% | 72.1% |
| 4hteA03 | 1.10.167.30 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › | 0.67 | 54.0 | 4.10e-01 | 93.5% | 37.5% |
| 2gtsA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.66 | 56.0 | 4.25e-01 | 100.0% | 41.6% |
| 2z16B01 | 1.20.91.10 | Mainly Alpha › Up-down Bundle › Influenza Virus Matrix Protein; Chain A, domain 1 › Influenza matrix M1, N-terminal subdomain 1 | 0.64 | 50.0 | 4.03e-01 | 100.0% | 39.7% |
| 1rqgA02 | 2.170.220.10 | Mainly Beta › Beta Complex › Methionyl-trna Synthetase; domain 2 › | 0.64 | 50.0 | 3.37e-01 | 100.0% | 20.1% |
| 5g5gB02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.63 | 49.0 | 3.57e-01 | 90.3% | 97.9% |
| 3ilkA02 | 1.10.8.590 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.63 | 45.0 | 3.46e-01 | 77.4% | 73.5% |
| 4rg8A04 | 1.10.287.1240 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.62 | 50.0 | 4.20e-01 | 100.0% | 50.0% |
| 1qv9A02 | 6.10.140.120 | Special › Helix non-globular › Helix Hairpins › | 0.62 | 49.0 | 3.55e-01 | 100.0% | 61.2% |
| 3cbuA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.60 | 45.0 | 3.17e-01 | 96.8% | 32.8% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.59 | 47.0 | 3.77e-01 | 100.0% | 44.0% |
| 3hr0B01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.58 | 47.0 | 3.64e-01 | 100.0% | 62.0% |
| 1j1jA02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.58 | 40.0 | 3.19e-01 | 96.8% | 30.6% |
| 1r5aA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.56 | 41.0 | 3.01e-01 | 100.0% | 37.5% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.53 | 43.0 | 3.71e-01 | 100.0% | 50.8% |
| 2lrmA00 | 1.10.890.30 | Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › YmgD protein | 0.53 | 41.0 | 3.21e-01 | 100.0% | 36.9% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3513381 | 4082.1.1.0 ↗ | alpha duplicates or obligate multimers › Hairy Orange domain › Hairy Orange domain › Hairy Orange domain | 0.90 | 76.0 | 6.20e-01 | 100.0% | 51.7% |
| 137838 | 223.1.1.3 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF | 0.86 | 77.0 | 4.68e-01 | 100.0% | 17.5% |
| 3915878 | 3922.1.1.65 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › PLC-beta_C | 0.71 | 54.0 | 3.39e-01 | 100.0% | 14.2% |
| 3283355 | 150.5.1.51 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100_2 | 0.70 | 52.0 | 4.11e-01 | 100.0% | 36.5% |
| 3493417 | 4163.1.1.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 | 0.69 | 55.0 | 3.50e-01 | 93.5% | 18.8% |
| 3545387 | 3602.1.1.0 ↗ | alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain | 0.69 | 52.0 | 3.75e-01 | 93.5% | 27.3% |
| 2720300 | 192.22.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ral binding domain of RLIP76 › Ral binding domain of RLIP76 › RLIP76_Ral-bd | 0.68 | 56.0 | 4.91e-01 | 100.0% | 94.1% |
| 4574972 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.67 | 53.0 | 4.41e-01 | 93.5% | 50.0% |
| 4953126 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.66 | 52.0 | 3.19e-01 | 96.8% | 13.0% |
| 3398414 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.66 | 51.0 | 4.80e-01 | 100.0% | 68.9% |
| 4034201 | 192.7.1.1 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › FemAB | 0.66 | 53.0 | 4.45e-01 | 96.8% | 51.7% |
| 3779360 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.65 | 52.0 | 3.42e-01 | 96.8% | 19.4% |
| 3534511 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.65 | 52.0 | 3.39e-01 | 96.8% | 19.4% |
| 3524013 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.65 | 52.0 | 2.91e-01 | 100.0% | 6.3% |
| 3761838 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.64 | 50.0 | 3.51e-01 | 93.5% | 26.1% |
| 3903553 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.63 | 48.0 | 3.47e-01 | 96.8% | 29.6% |
| 3896686 | 192.8.1.36 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › M_domain | 0.63 | 51.0 | 3.79e-01 | 100.0% | 31.0% |
| 3174776 | 4177.1.1.5 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Vps5 | 0.63 | 50.0 | 3.15e-01 | 100.0% | 49.3% |
| 3888162 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.63 | 49.0 | 3.53e-01 | 100.0% | 37.5% |
| 3600361 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.62 | 50.0 | 3.67e-01 | 96.8% | 32.6% |
| 3411254 | 630.1.1.0 ↗ | a+b complex topology › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain | 0.62 | 50.0 | 3.44e-01 | 100.0% | 22.1% |
| 4385616 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.62 | 50.0 | 3.55e-01 | 100.0% | 25.8% |
| 3382794 | 304.9.1.7 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › XS | 0.61 | 50.0 | 2.92e-01 | 93.5% | 10.0% |
| 3441728 | 1008.1.1.0 ↗ | alpha bundles › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain | 0.61 | 47.0 | 3.51e-01 | 96.8% | 32.4% |
| 4600185 | 3602.1.1.15 ↗ | alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › DUF444 | 0.61 | 50.0 | 4.00e-01 | 100.0% | 41.3% |
| 3437287 | 5086.1.1.199 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › PF31016 | 0.58 | 41.0 | 2.81e-01 | 100.0% | 17.7% |
| 3934503 | 614.1.1.1 ↗ | alpha duplicates or obligate multimers › L27 domain › L27 domain › L27 domain › L27 | 0.57 | 45.0 | 3.98e-01 | 93.5% | 60.0% |
| 4682722 | 237.1.1.5 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › RolB_RolC | 0.57 | 45.0 | 2.91e-01 | 100.0% | 23.5% |