Back to structures

OR159664.1__WKW86068.1__SEA_JONJAMES_94__00088

Bact-Vir

OR159664.1__WKW86068.1__SEA_JONJAMES_94__00088

Identity

Accession:
OR159664 ↗
Kingdom:
phage

Quality

86.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-82
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1dq3A04 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.54 41.0 3.77e-01 84.1% 89.5%
3nhqC03 3.30.450.270 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain 0.52 37.0 3.11e-01 73.2% 68.5%
2gukA00 3.30.2190.10 Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like 0.52 39.0 3.58e-01 80.5% 87.4%
2culA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 44.0 3.30e-01 98.8% 45.3%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3695303 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.60 46.0 4.10e-01 85.4% 78.9%
3657448 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.54 42.0 3.64e-01 87.8% 88.6%
3357930 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.53 40.0 4.18e-01 82.9% 100.0%
3721546 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.53 45.0 4.16e-01 100.0% 81.8%
4936751 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.52 42.0 3.37e-01 87.8% 84.1%
4113237 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.52 41.0 3.95e-01 86.6% 87.4%
3811780 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.52 40.0 3.70e-01 87.8% 80.9%
4367859 2003.1.2.10 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GIDA 0.51 46.0 3.01e-01 100.0% 29.3%
9287 2003.1.2.10 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GIDA 0.51 44.0 3.30e-01 98.8% 45.3%
4669669 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.50 41.0 3.79e-01 92.7% 80.0%
D2 medium residues 83-149
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1bxbA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.53 43.0 2.74e-01 94.0% 73.1%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2512827 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.57 42.0 2.92e-01 83.6% 81.9%
4988138 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.53 31.0 3.93e-01 91.0% 100.0%