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OR159664.1__WKW86164.1__SEA_JONJAMES_191__00185
Bact-VirOR159664.1__WKW86164.1__SEA_JONJAMES_191__00185
Identity
- Accession:
- OR159664 ↗
- Kingdom:
- phage
Quality
66.9
mean pLDDT
Taxonomy
TaxID: 3062832
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-59
Domain cluster:
representative
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4llgM00 | 3.10.20.510 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNA polymerase inhibitor | 0.83 | 68.0 | 6.95e-01 | 90.2% | 98.0% |
| 4njcA00 | 3.10.20.730 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like | 0.79 | 66.0 | 6.22e-01 | 90.2% | 88.3% |
| 3fk4B01 | 3.30.70.150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RuBisCO large subunit, N-terminal domain | 0.76 | 57.0 | 4.41e-01 | 82.4% | 94.8% |
| 2qsdB02 | 3.50.100.10 | Alpha Beta › 3-Layer(bba) Sandwich › protein il1583 fold › protein il1583 domain | 0.73 | 57.0 | 4.93e-01 | 92.2% | 55.1% |
| 2k57A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 56.0 | 5.52e-01 | 86.3% | 96.4% |
| 4kncA02 | 2.60.120.1380 | Mainly Beta › Sandwich › Jelly Rolls › C-terminal carbohydrate-binding module | 0.68 | 54.0 | 4.11e-01 | 86.3% | 43.6% |
| 2gmlA02 | 3.30.70.1560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Alpha-L RNA-binding motif | 0.67 | 50.0 | 4.51e-01 | 84.3% | 98.6% |
| 4gi3C00 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.66 | 46.0 | 4.55e-01 | 90.2% | 68.4% |
| 6julA02 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.66 | 50.0 | 4.11e-01 | 84.3% | 55.2% |
| 2rrnA01 | 3.30.70.2040 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 49.0 | 4.32e-01 | 86.3% | 97.6% |
| 2pwyA01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.65 | 49.0 | 4.77e-01 | 82.4% | 100.0% |
| 3zoqC00 | 6.20.250.30 | Special › Other non-globular › Double Stranded RNA Binding Domain › | 0.64 | 48.0 | 4.82e-01 | 84.3% | 92.5% |
| 1vioA03 | 3.30.70.1560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Alpha-L RNA-binding motif | 0.64 | 52.0 | 4.52e-01 | 92.2% | 97.6% |
| 3bcwA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 42.0 | 3.36e-01 | 86.3% | 33.7% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 50.0 | 4.59e-01 | 86.3% | 72.7% |
| 1y96A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 48.0 | 4.04e-01 | 84.3% | 64.0% |
| 2c60A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.62 | 48.0 | 4.28e-01 | 88.2% | 91.1% |
| 2piaA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 47.0 | 3.79e-01 | 84.3% | 57.7% |
| 3b8fB00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.61 | 51.0 | 3.78e-01 | 96.1% | 63.4% |
| 1qr4A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 47.0 | 4.00e-01 | 88.2% | 57.5% |
| 7y8sB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 48.0 | 4.19e-01 | 94.1% | 61.9% |
| 3wqbA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 45.0 | 3.19e-01 | 84.3% | 73.5% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.59 | 45.0 | 3.82e-01 | 86.3% | 91.3% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.59 | 43.0 | 3.17e-01 | 84.3% | 47.3% |
| 5hdwA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.58 | 45.0 | 3.42e-01 | 88.2% | 51.9% |
| 2dlgA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 46.0 | 4.01e-01 | 94.1% | 57.5% |
| 3h8hA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 42.0 | 3.68e-01 | 88.2% | 93.5% |
| 1mgpA01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 44.0 | 3.16e-01 | 94.1% | 29.0% |
| 1wh2A01 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.55 | 41.0 | 3.93e-01 | 88.2% | 68.9% |
| 1g6gB00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.55 | 42.0 | 3.26e-01 | 86.3% | 96.0% |
| 8ezmH02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 44.0 | 3.55e-01 | 96.1% | 67.0% |
| 1iyjB03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 46.0 | 3.35e-01 | 96.1% | 65.5% |
| 2d93A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 45.0 | 3.40e-01 | 98.0% | 50.0% |
| 1pqsA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 40.0 | 3.61e-01 | 84.3% | 63.6% |
| 2q0oA01 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.53 | 34.0 | 2.40e-01 | 86.3% | 20.2% |
| 7c2fB01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.53 | 44.0 | 3.81e-01 | 98.0% | 74.4% |
| 2pq0A02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.53 | 41.0 | 3.43e-01 | 98.0% | 47.0% |
| 2yvsA01 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.52 | 40.0 | 3.22e-01 | 88.2% | 74.6% |
| 1yhpA02 | 2.60.40.1720 | Mainly Beta › Sandwich › Immunoglobulin-like › Calcium-dependent cell adhesion molecule-1 | 0.52 | 39.0 | 3.07e-01 | 86.3% | 42.5% |
| 3szpB02 | 3.40.190.290 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › | 0.52 | 37.0 | 2.66e-01 | 84.3% | 23.6% |
| 4r3dA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 44.0 | 3.30e-01 | 100.0% | 99.3% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.51 | 35.0 | 3.11e-01 | 80.4% | 56.4% |
| 2kgfA00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.51 | 40.0 | 2.98e-01 | 90.2% | 90.0% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4004704 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.84 | 66.0 | 7.03e-01 | 84.3% | 100.0% |
| 3968122 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.83 | 64.0 | 6.81e-01 | 82.4% | 97.8% |
| 4995671 | 3115.1.1.12 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › PF30567 | 0.81 | 69.0 | 6.97e-01 | 92.2% | 96.0% |
| 3969006 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.79 | 63.0 | 6.68e-01 | 86.3% | 100.0% |
| 3975705 | 3115.6.1.0 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon | 0.79 | 61.0 | 6.24e-01 | 84.3% | 90.0% |
| 4007508 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.76 | 62.0 | 6.32e-01 | 90.2% | 92.0% |
| 4958689 | 821.1.1.14 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF2797 | 0.74 | 52.0 | 4.95e-01 | 84.3% | 63.3% |
| 4158495 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.73 | 63.0 | 5.21e-01 | 96.1% | 93.3% |
| 3973395 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.73 | 55.0 | 5.25e-01 | 82.4% | 100.0% |
| 3977819 | 304.147.1.0 ↗ | a+b two layers › Alpha-beta plaits › Tetrahydrodipicolinate acetyltransferase N-terminal domain › Tetrahydrodipicolinate acetyltransferase N-terminal domain | 0.72 | 56.0 | 5.31e-01 | 84.3% | 100.0% |
| 3404255 | 379.1.1.1 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_1 | 0.70 | 53.0 | 5.42e-01 | 88.2% | 86.0% |
| 4964049 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.68 | 50.0 | 4.68e-01 | 80.4% | 98.5% |
| 3400250 | 379.1.1.3 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_2 | 0.68 | 51.0 | 5.15e-01 | 90.2% | 82.0% |
| 3389022 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.67 | 52.0 | 5.29e-01 | 96.1% | 90.0% |
| 4139949 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.66 | 46.0 | 4.93e-01 | 80.4% | 92.5% |
| 3389045 | 379.1.1.1 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_1 | 0.66 | 48.0 | 4.89e-01 | 98.0% | 82.0% |
| 3410496 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.66 | 49.0 | 5.06e-01 | 98.0% | 87.5% |
| 3415618 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.64 | 50.0 | 4.77e-01 | 98.0% | 75.0% |
| 3280833 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.64 | 46.0 | 4.46e-01 | 80.4% | 100.0% |
| 3282305 | 4187.1.1.0 ↗ | a+b two layers › NosL/MerB-like › NosL/MerB-like › NosL/MerB-like | 0.64 | 49.0 | 4.46e-01 | 86.3% | 70.0% |
| 3388590 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.63 | 47.0 | 4.52e-01 | 98.0% | 71.7% |
| 5009387 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.62 | 46.0 | 4.44e-01 | 82.4% | 100.0% |
| 3400735 | 379.1.1.3 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_2 | 0.62 | 48.0 | 4.74e-01 | 98.0% | 81.8% |
| 3631449 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.60 | 46.0 | 2.81e-01 | 90.2% | 19.8% |
| 3603549 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 46.0 | 4.03e-01 | 84.3% | 73.1% |
| 3315163 | 3125.1.1.1 ↗ | alpha arrays › Asl3597 › Asl3597 › Asl3597 › CRR7 | 0.59 | 45.0 | 3.99e-01 | 84.3% | 100.0% |
| 3067246 | 3115.3.1.1 ↗ | a+b two layers › GP2-like › P56 › P56 › UDG-inhib_P56 | 0.58 | 44.0 | 4.36e-01 | 86.3% | 89.3% |
| 3958896 | 4187.2.1.0 ↗ | a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 | 0.58 | 45.0 | 4.31e-01 | 84.3% | 75.0% |
| 5040885 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 46.0 | 3.67e-01 | 94.1% | 54.8% |
| 5075196 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 44.0 | 3.51e-01 | 88.2% | 57.4% |
| 3721580 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.57 | 49.0 | 3.09e-01 | 100.0% | 55.1% |
| 4018289 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 44.0 | 3.36e-01 | 94.1% | 62.1% |
| 3219446 | 10.4.1.9 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_2 | 0.55 | 39.0 | 3.08e-01 | 84.3% | 35.5% |
| 3621341 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.55 | 42.0 | 3.73e-01 | 84.3% | 89.3% |
| 3414064 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.55 | 39.0 | 3.93e-01 | 90.2% | 78.2% |
| 3618240 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.55 | 46.0 | 3.80e-01 | 100.0% | 80.0% |
| 3621342 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.54 | 42.0 | 3.48e-01 | 86.3% | 80.0% |
| 1937230 | 2010.1.1.1 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › DegV | 0.53 | 38.0 | 2.87e-01 | 84.3% | 96.2% |
| 4383356 | 3615.1.1.49 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Dynamin_N | 0.51 | 45.0 | 2.55e-01 | 100.0% | 35.0% |
| 3988557 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.51 | 43.0 | 2.79e-01 | 100.0% | 70.4% |
| 3941506 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.50 | 38.0 | 2.44e-01 | 92.2% | 31.3% |