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OR159675.1__WKW87196.1__SAVBUCKETDAWG_70__00070
Bact-VirOR159675.1__WKW87196.1__SAVBUCKETDAWG_70__00070
Identity
- Accession:
- OR159675 ↗
- Kingdom:
- phage
Quality
85.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Stackebrandtviridae›
Wizardvirus›
Gordonia_phage_Savbucketdawg
TaxID: 3043928
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-51_105-135
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5uaoC00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 42.0 | 2.58e-01 | 86.6% | 42.2% |
| 5jciA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 44.0 | 3.80e-01 | 93.9% | 83.3% |
| 1q1rA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 44.0 | 3.81e-01 | 93.9% | 84.0% |
| 2i0zA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 41.0 | 2.93e-01 | 86.6% | 78.5% |
| 4akgA03 | 3.20.180.20 | Alpha Beta › Alpha-Beta Barrel › Split barrel-like › Dynein motor heavy chain, linker domain, subdomain 3 | 0.52 | 33.0 | 3.30e-01 | 92.7% | 62.7% |
| 6bxzA02 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.52 | 40.0 | 3.73e-01 | 82.9% | 87.1% |
| 1ohvA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 35.0 | 2.85e-01 | 70.7% | 81.3% |
| 3fg2P02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 43.0 | 3.76e-01 | 93.9% | 84.9% |
| 3ef6A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 42.0 | 3.80e-01 | 93.9% | 88.3% |
| 4fk1A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 42.0 | 3.84e-01 | 92.7% | 84.8% |
| 2aqjA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 40.0 | 2.49e-01 | 86.6% | 44.1% |
| 3zgzD04 | 2.20.28.290 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.51 | 30.0 | 3.37e-01 | 80.5% | 77.4% |
| 4dq2A03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 26.0 | 3.14e-01 | 75.6% | 80.9% |
| 2wesA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 39.0 | 2.45e-01 | 86.6% | 45.0% |
| 2pyxA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 39.0 | 2.96e-01 | 86.6% | 73.1% |
| 6frlA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 39.0 | 2.45e-01 | 86.6% | 45.0% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3678875 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.53 | 44.0 | 3.75e-01 | 93.9% | 78.6% |
| 3831288 | 2003.1.2.129 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Trp_halogenase, Pyr_redox_2 | 0.53 | 44.0 | 3.74e-01 | 93.9% | 79.3% |
| 4080040 | 2003.1.2.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.52 | 42.0 | 2.58e-01 | 86.6% | 60.0% |
| 2499578 | 7577.1.1.2 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_3 | 0.52 | 29.0 | 2.62e-01 | 78.0% | 37.0% |
| 1949142 | 2003.1.2.21 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Trp_halogenase | 0.52 | 41.0 | 3.00e-01 | 85.4% | 95.6% |
| 4350615 | 2003.1.2.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.52 | 41.0 | 2.55e-01 | 86.6% | 61.0% |
| 3391437 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.52 | 43.0 | 3.72e-01 | 93.9% | 80.7% |
| 4102382 | 2003.1.2.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox | 0.52 | 43.0 | 3.67e-01 | 93.9% | 80.0% |
| 3284288 | 2003.1.2.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.52 | 41.0 | 2.52e-01 | 86.6% | 91.7% |
| 4358874 | 2003.1.2.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.52 | 41.0 | 2.64e-01 | 86.6% | 76.7% |
| 3181649 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.52 | 43.0 | 3.58e-01 | 93.9% | 73.3% |
| 3315909 | 2003.1.2.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.52 | 41.0 | 2.50e-01 | 86.6% | 57.9% |
| 3214033 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.51 | 42.0 | 3.71e-01 | 93.9% | 81.5% |
| 5047494 | 2003.1.2.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase | 0.51 | 41.0 | 2.55e-01 | 87.8% | 59.2% |
| 2138615 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.51 | 41.0 | 3.73e-01 | 91.5% | 80.3% |
| 3953996 | 7577.1.1.2 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_3 | 0.51 | 36.0 | 2.67e-01 | 74.4% | 31.2% |
| 4964081 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.51 | 40.0 | 3.63e-01 | 87.8% | 88.7% |
| 3279467 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.50 | 40.0 | 3.64e-01 | 89.0% | 87.0% |
D2
medium
residues 52-104_136-168
Domain cluster:
representative
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3994088 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.60 | 32.0 | 2.80e-01 | 84.9% | 33.8% |
| 5025927 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 38.0 | 3.53e-01 | 74.4% | 95.5% |
| 5042767 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 35.0 | 3.40e-01 | 73.3% | 90.8% |