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OR180307.1__WNT46222.1__X__00125
Bact-VirOR180307.1__WNT46222.1__X__00125
Identity
- Accession:
- OR180307 ↗
- Kingdom:
- phage
Quality
67.5
mean pLDDT
Cluster
View cluster (9 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-60
D2
medium
residues 61-122
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2v79A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 50.0 | 4.09e-01 | 87.1% | 56.5% |
| 1bm9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 48.0 | 3.91e-01 | 88.7% | 54.2% |
| 1ug8A00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.56 | 43.0 | 3.90e-01 | 91.9% | 60.9% |
| 3qv2A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 46.0 | 3.39e-01 | 100.0% | 97.0% |
| 1fpqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 48.0 | 3.85e-01 | 100.0% | 51.2% |
| 4dkjA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 45.0 | 3.04e-01 | 100.0% | 77.0% |
| 3d3lA02 | 3.10.450.60 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 40.0 | 3.72e-01 | 79.0% | 68.8% |
| 6fdfA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 45.0 | 3.34e-01 | 100.0% | 84.1% |
| 5h02A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 45.0 | 3.40e-01 | 100.0% | 84.3% |
| 2c42A03 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.54 | 41.0 | 2.99e-01 | 88.7% | 91.0% |
| 6pwkA02 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.53 | 40.0 | 2.88e-01 | 88.7% | 64.1% |
| 3elkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 43.0 | 3.60e-01 | 88.7% | 56.2% |
| 2i6gB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 45.0 | 3.26e-01 | 100.0% | 80.4% |
| 4jxqA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 38.0 | 2.80e-01 | 79.0% | 57.1% |
| 3cedA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.52 | 37.0 | 3.28e-01 | 77.4% | 74.5% |
| 1lk5A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.52 | 39.0 | 3.73e-01 | 91.9% | 68.4% |
| 3lodA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 45.0 | 3.47e-01 | 100.0% | 59.3% |
| 3c4aA02 | 3.30.9.20 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › | 0.52 | 42.0 | 3.32e-01 | 96.8% | 62.8% |
| 3d3sA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 42.0 | 3.31e-01 | 100.0% | 61.6% |
| 6vt2A03 | 2.60.40.4140 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 40.0 | 3.34e-01 | 88.7% | 52.5% |
| 2gj3A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 42.0 | 3.56e-01 | 100.0% | 90.8% |
| 1uzxA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.51 | 37.0 | 2.95e-01 | 79.0% | 36.4% |
| 1j2vA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 39.0 | 3.45e-01 | 88.7% | 85.1% |
| 2xs2A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.51 | 40.0 | 3.68e-01 | 96.8% | 66.7% |
| 1u2zA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 41.0 | 3.13e-01 | 98.4% | 77.2% |
| 4oe6B02 | 3.40.309.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 | 0.51 | 36.0 | 2.60e-01 | 75.8% | 75.4% |
| 4lg1B00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 41.0 | 3.00e-01 | 98.4% | 73.2% |
| 2bopA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.51 | 39.0 | 3.62e-01 | 91.9% | 65.9% |
| 2ftrA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 38.0 | 3.37e-01 | 88.7% | 58.3% |
| 4ywzB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.50 | 39.0 | 3.15e-01 | 93.5% | 89.7% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5025980 | 101.1.2.914 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF6015 | 0.74 | 56.0 | 4.96e-01 | 88.7% | 56.7% |
| 3869154 | 101.1.2.565 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_PARP12 | 0.69 | 56.0 | 5.13e-01 | 88.7% | 77.5% |
| 3464534 | 101.1.2.641 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1, DUF7647 | 0.68 | 54.0 | 3.17e-01 | 88.7% | 12.4% |
| 3597631 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 60.0 | 4.00e-01 | 100.0% | 33.9% |
| 3657248 | 101.1.2.394 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 | 0.67 | 54.0 | 4.54e-01 | 88.7% | 65.7% |
| 3347816 | 101.1.2.394 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 | 0.66 | 54.0 | 4.39e-01 | 88.7% | 60.0% |
| 3180811 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.64 | 51.0 | 3.77e-01 | 90.3% | 55.2% |
| 3599724 | 101.1.2.236 ↗ | alpha arrays › HTH › HTH › winged helix domain › POLR3C_WHD | 0.62 | 50.0 | 3.83e-01 | 88.7% | 43.4% |
| 3611256 | 101.1.2.236 ↗ | alpha arrays › HTH › HTH › winged helix domain › POLR3C_WHD | 0.62 | 50.0 | 2.91e-01 | 88.7% | 11.2% |
| 4993583 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.62 | 53.0 | 4.32e-01 | 100.0% | 50.0% |
| 3469845 | 101.1.2.98 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1 | 0.62 | 54.0 | 3.90e-01 | 100.0% | 37.2% |
| 5011607 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 55.0 | 4.23e-01 | 100.0% | 58.6% |
| 3713634 | 101.1.2.236 ↗ | alpha arrays › HTH › HTH › winged helix domain › POLR3C_WHD | 0.62 | 50.0 | 4.27e-01 | 88.7% | 61.0% |
| 3955994 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.61 | 49.0 | 4.44e-01 | 88.7% | 70.6% |
| 3829789 | 101.1.2.245 ↗ | alpha arrays › HTH › HTH › winged helix domain › PORR | 0.61 | 54.0 | 4.32e-01 | 100.0% | 54.4% |
| 4974688 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.61 | 45.0 | 4.35e-01 | 83.9% | 71.4% |
| 5017859 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 50.0 | 4.36e-01 | 88.7% | 76.7% |
| 3743344 | 101.1.2.251 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF6581 | 0.60 | 48.0 | 4.28e-01 | 88.7% | 73.3% |
| 4972556 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 51.0 | 4.67e-01 | 100.0% | 76.5% |
| 4983771 | 221.1.1.14 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ThiS | 0.58 | 45.0 | 4.61e-01 | 83.9% | 98.3% |
| 3577533 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.58 | 46.0 | 3.81e-01 | 90.3% | 46.7% |
| 3306699 | 101.1.2.517 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD | 0.58 | 52.0 | 3.17e-01 | 100.0% | 23.7% |
| 3788192 | 325.1.8.5 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › CSL4_N | 0.57 | 47.0 | 4.19e-01 | 90.3% | 64.8% |
| 4950064 | 327.16.1.22 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › PF27275 | 0.57 | 43.0 | 4.17e-01 | 85.5% | 72.9% |
| 3693267 | 320.1.1.6 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › DUF6581 | 0.57 | 51.0 | 4.84e-01 | 100.0% | 98.7% |
| 3629452 | 101.1.2.98 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1 | 0.57 | 47.0 | 3.51e-01 | 100.0% | 41.1% |
| 3734775 | 192.29.1.174 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › PF28510 | 0.56 | 46.0 | 3.37e-01 | 100.0% | 68.3% |
| 4538612 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.56 | 44.0 | 2.86e-01 | 95.2% | 52.4% |
| 4996027 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.56 | 43.0 | 2.95e-01 | 88.7% | 60.8% |
| 4949366 | 2003.1.5.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MethyltransfD12 | 0.55 | 46.0 | 3.09e-01 | 100.0% | 88.3% |
| 3167709 | 101.1.2.166 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM6_C | 0.55 | 49.0 | 4.01e-01 | 100.0% | 70.4% |
| 4189854 | 2004.1.3.2 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR,EKR | 0.55 | 42.0 | 2.90e-01 | 88.7% | 71.9% |
| 3618706 | 207.1.1.247 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF28313 | 0.55 | 46.0 | 2.92e-01 | 100.0% | 41.7% |
| 3703618 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.55 | 44.0 | 3.90e-01 | 91.9% | 62.1% |
| 4993856 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.55 | 45.0 | 3.89e-01 | 100.0% | 57.1% |
| 3585425 | 101.1.2.98 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1 | 0.54 | 46.0 | 4.08e-01 | 100.0% | 74.7% |
| 4995408 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.54 | 43.0 | 2.94e-01 | 91.9% | 88.5% |
| 3304622 | 2006.1.1.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › NIF | 0.54 | 43.0 | 3.06e-01 | 95.2% | 25.7% |
| 3491594 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.53 | 38.0 | 3.15e-01 | 77.4% | 73.3% |
| 3637726 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 44.0 | 3.73e-01 | 96.8% | 74.5% |
| 5062595 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.53 | 41.0 | 2.81e-01 | 88.7% | 74.2% |
| 3300663 | 304.12.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 | 0.53 | 43.0 | 4.15e-01 | 96.8% | 81.4% |
| 3925612 | 7084.1.1.1 ↗ | few secondary structure elements › Highly disulfide-linked beta sandwich region of p43 › Highly disulfide-linked beta sandwich region of p43 › Highly disulfide-linked beta sandwich region of p43 › PF28734 | 0.53 | 43.0 | 3.89e-01 | 98.4% | 91.6% |
| 3505207 | 2004.1.3.2 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR,EKR | 0.52 | 40.0 | 2.75e-01 | 88.7% | 71.5% |
| 3992985 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.52 | 39.0 | 3.59e-01 | 88.7% | 61.2% |
| 3680618 | 11.1.1.982 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PIG-X | 0.52 | 38.0 | 2.83e-01 | 83.9% | 75.5% |
| 4142057 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.52 | 42.0 | 3.22e-01 | 100.0% | 53.9% |
| 4117256 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.52 | 41.0 | 3.31e-01 | 90.3% | 53.8% |
| 4185343 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.52 | 41.0 | 3.16e-01 | 96.8% | 55.4% |
| 3813507 | 101.1.2.278 ↗ | alpha arrays › HTH › HTH › winged helix domain › CNDH2_C | 0.51 | 46.0 | 3.58e-01 | 98.4% | 48.5% |
| 5025561 | 2003.1.5.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MethyltransfD12 | 0.51 | 41.0 | 2.85e-01 | 100.0% | 88.4% |
| 5184 | 304.4.1.11 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › EthD | 0.50 | 38.0 | 3.37e-01 | 88.7% | 58.3% |
| 4345620 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.50 | 40.0 | 2.88e-01 | 100.0% | 35.7% |
| 1515240 | 2003.1.5.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › RrnaAD | 0.50 | 41.0 | 3.10e-01 | 100.0% | 81.1% |