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OR180307.1__WNT46255.1__X__00158

Bact-Vir

OR180307.1__WNT46255.1__X__00158

Identity

Accession:
OR180307 ↗
Kingdom:
phage

Quality

78.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-74
PDB
Domain cluster: representative
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1i6uA01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.81 58.0 5.89e-01 75.4% 88.2%
1kafA00 3.90.1150.20 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription regulator MotA, C-terminal domain 0.71 48.0 4.08e-01 75.4% 44.4%
1u5tA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 54.0 5.29e-01 87.0% 97.3%
7m0oA02 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.68 49.0 3.58e-01 76.8% 31.0%
4n3pA02 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.66 50.0 3.54e-01 81.2% 59.5%
2yvwA02 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.66 53.0 3.77e-01 88.4% 94.2%
2o0bA01 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.65 50.0 3.57e-01 85.5% 27.8%
1gmuA01 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.65 37.0 3.82e-01 73.9% 58.2%
3slhA02 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.64 47.0 3.38e-01 79.7% 26.2%
2o0bA02 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.64 48.0 3.45e-01 84.1% 26.5%
3zx4A02 3.30.980.20 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Putative mannosyl-3-phosphoglycerate phosphatase; domain 2 0.62 46.0 4.24e-01 78.3% 79.3%
4i0wA00 3.30.70.2980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 44.0 4.04e-01 75.4% 67.4%
3daoA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.62 46.0 3.97e-01 79.7% 85.3%
5ghrA02 3.10.310.30 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › 0.61 48.0 3.99e-01 87.0% 94.4%
1xviA02 3.30.980.20 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Putative mannosyl-3-phosphoglycerate phosphatase; domain 2 0.60 44.0 3.97e-01 76.8% 76.6%
1bqnA02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.60 33.0 3.00e-01 85.5% 38.3%
2gjhA00 3.30.1070.20 Alpha Beta › 2-Layer Sandwich › Cell Cycle; Chain A › 0.60 34.0 3.73e-01 81.2% 68.4%
1kzfA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.59 44.0 3.24e-01 81.2% 36.9%
3r4cA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.59 44.0 3.94e-01 79.7% 85.1%
4d8qF03 3.50.7.10 Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL 0.59 50.0 3.86e-01 97.1% 66.0%
2dpmA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 46.0 3.68e-01 89.9% 41.9%
3f8kA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.59 47.0 3.87e-01 89.9% 46.6%
2pq0A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.59 43.0 3.84e-01 78.3% 83.0%
4q5eA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 36.0 3.52e-01 89.9% 57.3%
4jwoA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.58 40.0 3.25e-01 75.4% 36.2%
1wzcA02 3.30.980.20 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Putative mannosyl-3-phosphoglycerate phosphatase; domain 2 0.58 43.0 4.10e-01 79.7% 83.1%
6vudA02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.58 44.0 4.37e-01 88.4% 78.7%
2g1pB01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 43.0 3.49e-01 85.5% 42.5%
2cxaA01 3.30.70.3550 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Leucyl/phenylalanyl-tRNA-protein transferase, N-terminal domain 0.56 40.0 4.19e-01 84.1% 88.3%
4ad9A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 49.0 4.61e-01 98.6% 95.2%
3rq1D01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.56 46.0 3.53e-01 100.0% 39.9%
7ly5B01 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.55 45.0 3.42e-01 92.8% 39.2%
3v10A02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 44.0 3.54e-01 89.9% 52.7%
1wr8A02 3.90.1070.10 Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › 0.55 41.0 4.14e-01 79.7% 79.7%
1pc3A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.55 37.0 3.00e-01 71.0% 100.0%
6uvuA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 40.0 3.55e-01 78.3% 55.8%
2v9vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 42.0 4.42e-01 82.6% 98.3%
2oh1C00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 45.0 3.40e-01 91.3% 78.5%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 39.0 3.50e-01 76.8% 61.4%
4tpvA00 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.55 42.0 3.16e-01 84.1% 96.2%
1u02A02 3.30.70.1020 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trehalose-6-phosphate phosphatase related protein; domain 2 0.55 40.0 3.90e-01 78.3% 78.9%
2qh9A00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.55 42.0 3.17e-01 85.5% 69.1%
2dchX02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.54 42.0 3.74e-01 89.9% 71.2%
2kx2A00 3.30.780.30 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › 0.54 40.0 3.63e-01 81.2% 58.3%
4kr6A01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.54 44.0 3.38e-01 94.2% 40.4%
1sd4A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 38.0 3.95e-01 76.8% 95.3%
2amyA02 3.30.1240.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › Eukaryotic phosphomannomutase, cap domain 0.53 38.0 3.39e-01 76.8% 77.5%
3ldgA01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.52 37.0 2.74e-01 75.4% 45.4%
2qziA00 3.40.1720.10 Alpha Beta › 3-Layer(aba) Sandwich › Streptococcus thermophilus LMG 18311 protein like › Streptococcus thermophilus LMG 18311 protein like 0.51 37.0 3.41e-01 82.6% 95.0%
2l04A00 2.60.40.1080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 39.0 3.59e-01 89.9% 63.7%
4igbB02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 42.0 3.43e-01 98.6% 51.7%
4b8cD02 3.30.1370.190 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.50 40.0 4.04e-01 89.9% 94.1%
4k30A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.50 38.0 3.01e-01 94.2% 37.9%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3960517 328.6.1.0 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like 0.72 53.0 3.69e-01 79.7% 25.2%
3455192 320.1.1.11 a+b two layers › R3H domain-like › R3H domain › R3H domain › PF27261 0.72 56.0 5.50e-01 85.5% 80.0%
4993845 320.3.1.4 a+b two layers › R3H domain-like › PG1857-like › PG1857-like › DUF483 0.71 51.0 3.91e-01 76.8% 33.5%
4508118 2006.1.1.11 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 0.64 45.0 3.13e-01 76.8% 22.7%
3164346 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 44.0 4.81e-01 78.3% 92.7%
3850130 101.1.2.235 alpha arrays › HTH › HTH › winged helix domain › Nlrc4-like_WHD 0.63 50.0 5.11e-01 89.9% 93.8%
3177309 101.1.2.7 alpha arrays › HTH › HTH › winged helix domain › HSF_DNA-bind 0.63 44.0 4.01e-01 72.5% 81.1%
3450997 3012.1.1.1 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Trehalose_PPase 0.62 37.0 3.26e-01 97.1% 41.0%
3669263 109.4.1.1506 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, HEAT_EZ, Importin_rep_4, Importin_rep_6, TPR_IMB1, TPR_IPO5 0.62 49.0 2.73e-01 87.0% 9.1%
3445291 2003.1.5.80 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_24 0.62 47.0 3.22e-01 85.5% 23.0%
4362031 192.11.1.0 alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB 0.61 44.0 3.04e-01 78.3% 22.6%
3495011 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.61 49.0 3.46e-01 91.3% 26.4%
3670277 3012.1.1.1 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Trehalose_PPase 0.61 43.0 4.19e-01 73.9% 90.7%
3596774 225.1.1.0 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.60 43.0 3.59e-01 75.4% 70.0%
4022212 109.4.1.2612 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, MMS19_C, HEAT_EZ, Importin_rep_4, Importin_rep_5, Importin_rep_6, TPR_IMB1, TPR_IPO5 0.60 48.0 2.68e-01 89.9% 12.3%
3743227 109.4.1.3071 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, HEAT_EZ, Importin_rep_4, TOR1L1_N, TPR_IMB1, TPR_IPO5 0.60 48.0 2.73e-01 89.9% 15.6%
5057602 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.59 44.0 4.11e-01 78.3% 77.6%
3210725 109.4.1.2814 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, HEAT_EZ, Importin_rep_4, Importin_rep_5, Importin_rep_6, HEAT_GCN1, TPR_IMB1, TPR_IPO5 0.59 52.0 2.85e-01 100.0% 6.1%
5082978 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.59 47.0 3.67e-01 91.3% 38.7%
5066119 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.59 51.0 3.30e-01 95.7% 27.7%
4544870 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.59 42.0 3.20e-01 81.2% 29.2%
4998119 213.1.1.29 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_9 0.59 48.0 3.70e-01 92.8% 38.9%
4951829 3012.1.1.1 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Trehalose_PPase 0.59 41.0 4.02e-01 73.9% 90.7%
4523195 192.11.1.0 alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB 0.59 43.0 3.05e-01 78.3% 57.1%
5028586 2003.1.5.82 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.58 49.0 3.43e-01 94.2% 67.6%
3987502 304.25.1.0 a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain 0.58 39.0 2.96e-01 75.4% 27.4%
3782093 3012.1.1.1 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Trehalose_PPase 0.58 40.0 3.78e-01 72.5% 97.6%
2075047 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.58 43.0 4.10e-01 79.7% 83.1%
3586847 101.1.2.66 alpha arrays › HTH › HTH › winged helix domain › Mga 0.58 43.0 4.17e-01 82.6% 78.8%
3242783 145.1.1.0 alpha arrays › F-box domain › F-box domain › F-box domain 0.57 41.0 2.80e-01 79.7% 19.0%
4997152 7523.1.1.23 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2 0.57 39.0 3.20e-01 72.5% 39.3%
3186882 2003.1.5.156 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr, Methyltransf_31 0.57 47.0 2.96e-01 95.7% 65.6%
3633705 109.4.1.2507 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_EZ, Importin_rep_4, Importin_rep_5, Importin_rep_6, TPR_IMB1 0.56 50.0 2.82e-01 100.0% 8.4%
4930872 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.56 37.0 3.04e-01 75.4% 33.6%
3670241 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 46.0 2.95e-01 91.3% 24.6%
3807514 2006.1.1.3 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase 0.56 46.0 3.14e-01 94.2% 42.2%
4614032 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.56 41.0 3.93e-01 78.3% 75.0%
4986463 2004.1.1.5 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.56 42.0 2.85e-01 82.6% 24.4%
4455158 7523.1.1.23 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2 0.56 39.0 3.03e-01 75.4% 31.5%
3988426 101.1.2.66 alpha arrays › HTH › HTH › winged helix domain › Mga 0.55 41.0 4.08e-01 82.6% 81.3%
3190723 109.4.1.1506 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, HEAT_EZ, Importin_rep_4, Importin_rep_6, TPR_IMB1, TPR_IPO5 0.55 47.0 2.69e-01 100.0% 20.3%
5027769 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.55 41.0 3.19e-01 81.2% 40.0%
4975148 101.1.2.28 alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B 0.54 42.0 3.70e-01 91.3% 55.2%
4241771 2006.1.1.11 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 0.54 44.0 3.09e-01 92.8% 36.7%
5026112 3457.1.1.0 alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease 0.54 46.0 3.18e-01 92.8% 36.8%
4295057 2006.1.1.11 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 0.53 43.0 2.93e-01 89.9% 41.1%
3249306 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 40.0 3.65e-01 84.1% 77.9%
4241985 2006.1.1.37 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP+Hydrolase_3 0.52 42.0 2.90e-01 92.8% 39.6%
5024436 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 40.0 3.91e-01 85.5% 92.0%
3478289 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.52 31.0 3.52e-01 84.1% 82.0%
4998804 3110.1.1.0 a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain 0.51 36.0 3.15e-01 75.4% 46.1%
5007807 304.26.1.1 a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP 0.51 35.0 3.20e-01 71.0% 69.5%