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OR180310.1__WNT46503.1__X__00074

Bact-Vir

OR180310.1__WNT46503.1__X__00074

Identity

Accession:
OR180310 ↗
Kingdom:
phage

Quality

73.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Obolenskvirus› Acinetobacter_phage_A832.1

TaxID: 3075076

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-83
PDB
Domain cluster: representative
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4njcA00 3.10.20.730 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like 0.73 50.0 5.68e-01 76.2% 95.0%
1vwxS01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.64 47.0 4.93e-01 77.5% 91.5%
1h2cA00 2.70.20.20 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Matrix protein VP40, N-terminal domain 0.63 44.0 3.83e-01 73.8% 92.7%
3hh2D03 3.30.60.30 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.62 32.0 4.16e-01 87.5% 100.0%
5kfzA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.61 43.0 3.75e-01 72.5% 55.3%
2hdeA01 3.10.20.550 Alpha Beta › Roll › Ubiquitin-like (UB roll) › ASAP complex, SAP18 subunit 0.59 40.0 3.48e-01 70.0% 85.4%
1t0tV02 3.30.70.1030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 0.57 40.0 3.61e-01 72.5% 90.1%
1hq6B00 3.50.20.10 Alpha Beta › 3-Layer(bba) Sandwich › Pyruvoyl-Dependent Histidine Decarboxylase; Chain B › Pyruvoyl-Dependent Histidine Decarboxylase, subunit B 0.56 45.0 3.30e-01 88.7% 38.2%
2hfqA00 3.10.510.10 Alpha Beta › Roll › NE1680-like fold › NE1680-like 0.56 50.0 4.94e-01 100.0% 97.6%
2znrA00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.55 47.0 3.66e-01 95.0% 84.3%
4mzyA01 3.20.140.10 Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase 0.55 42.0 2.89e-01 83.7% 75.2%
3vl9B00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.55 39.0 2.94e-01 77.5% 48.4%
4d10F01 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.54 44.0 3.45e-01 90.0% 74.9%
1u0kA01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.54 37.0 3.17e-01 71.2% 100.0%
1nlrA00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.54 39.0 2.91e-01 78.8% 47.7%
3kzpA00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.53 48.0 3.42e-01 100.0% 59.3%
2vg9A00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.52 39.0 2.92e-01 82.5% 51.2%
5cw3C01 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.52 44.0 3.72e-01 100.0% 90.5%
1qyaB01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.51 38.0 3.15e-01 100.0% 43.8%
4r0mA02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.51 40.0 3.72e-01 88.7% 70.4%
6ijbA01 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.50 39.0 3.76e-01 90.0% 73.5%
ECOD (39)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3223690 150.3.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine 0.70 48.0 3.94e-01 71.2% 40.0%
3987406 3115.6.1.1 ↗ a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › RpoY 0.69 59.0 6.09e-01 93.8% 100.0%
3729534 821.1.1.0 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease 0.68 55.0 4.59e-01 91.3% 69.7%
4929776 3115.5.1.0 ↗ a+b two layers › GP2-like › phenylacetate-CoA oxygenase subunit PaaB › phenylacetate-CoA oxygenase subunit PaaB 0.66 52.0 5.51e-01 95.0% 97.1%
4202856 299.1.1.1 ↗ a+b complex topology › YbaK/ProRS associated domain › YbaK/ProRS associated domain › YbaK/ProRS associated domain › tRNA_edit 0.65 57.0 4.52e-01 98.8% 75.8%
4351161 299.1.1.1 ↗ a+b complex topology › YbaK/ProRS associated domain › YbaK/ProRS associated domain › YbaK/ProRS associated domain › tRNA_edit 0.64 57.0 4.35e-01 97.5% 69.4%
4610477 299.1.1.1 ↗ a+b complex topology › YbaK/ProRS associated domain › YbaK/ProRS associated domain › YbaK/ProRS associated domain › tRNA_edit 0.60 51.0 3.80e-01 97.5% 59.5%
3781034 299.1.1.1 ↗ a+b complex topology › YbaK/ProRS associated domain › YbaK/ProRS associated domain › YbaK/ProRS associated domain › tRNA_edit 0.59 51.0 4.19e-01 97.5% 84.0%
4556330 299.1.1.1 ↗ a+b complex topology › YbaK/ProRS associated domain › YbaK/ProRS associated domain › YbaK/ProRS associated domain › tRNA_edit 0.59 53.0 4.20e-01 98.8% 75.0%
3743440 299.1.1.1 ↗ a+b complex topology › YbaK/ProRS associated domain › YbaK/ProRS associated domain › YbaK/ProRS associated domain › tRNA_edit 0.59 49.0 3.96e-01 96.2% 73.5%
4099366 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.58 41.0 3.19e-01 75.0% 100.0%
3174891 299.1.1.0 ↗ a+b complex topology › YbaK/ProRS associated domain › YbaK/ProRS associated domain › YbaK/ProRS associated domain 0.58 50.0 4.15e-01 97.5% 84.1%
3275034 2007.1.19.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like › Patatin 0.58 41.0 2.80e-01 77.5% 82.8%
4134159 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.58 39.0 3.05e-01 71.2% 100.0%
5030478 299.1.1.1 ↗ a+b complex topology › YbaK/ProRS associated domain › YbaK/ProRS associated domain › YbaK/ProRS associated domain › tRNA_edit 0.57 51.0 4.08e-01 98.8% 68.4%
3281849 303.1.1.3 ↗ a+b four layers › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases › DUF4189 0.57 47.0 4.27e-01 95.0% 92.0%
3732370 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.56 39.0 4.27e-01 71.2% 95.0%
3420779 10.32.1.203 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.55 38.0 3.09e-01 72.5% 76.2%
3265857 299.1.1.0 ↗ a+b complex topology › YbaK/ProRS associated domain › YbaK/ProRS associated domain › YbaK/ProRS associated domain 0.55 47.0 4.32e-01 100.0% 100.0%
2794904 807.1.1.1 ↗ a+b two layers › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › CpcD 0.54 37.0 4.03e-01 71.2% 87.9%
3519907 3333.1.1.1 ↗ a+b two layers › Barrel domain in dedicator of cytokinesis protein 9 › Barrel domain in dedicator of cytokinesis protein 9 › Barrel domain in dedicator of cytokinesis protein 9 › DHR-2_Lobe_B 0.54 46.0 3.78e-01 100.0% 93.3%
3291383 286.1.1.0 ↗ a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like 0.53 41.0 3.54e-01 98.8% 53.6%
3333290 10.32.1.203 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.53 37.0 2.85e-01 73.8% 66.1%
3614316 1116.1.1.0 ↗ a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain 0.52 36.0 2.82e-01 72.5% 31.4%
2557261 807.1.1.1 ↗ a+b two layers › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › CpcD 0.52 36.0 3.45e-01 71.2% 63.0%
3480345 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.52 37.0 2.97e-01 73.8% 46.7%
3493644 10.32.1.203 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.52 38.0 3.02e-01 77.5% 70.9%
3815036 3397.1.1.0 ↗ a+b complex topology › Tic22 › Tic22 › Tic22 0.51 43.0 3.87e-01 100.0% 94.4%
3313016 3397.1.1.2 ↗ a+b complex topology › Tic22 › Tic22 › Tic22 › DUF3110 0.51 43.0 3.84e-01 97.5% 94.2%
7496 286.1.1.2 ↗ a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF 0.51 37.0 3.21e-01 98.8% 48.1%
3222706 327.5.1.2 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C 0.51 41.0 3.57e-01 90.0% 56.9%
4046575 286.1.1.2 ↗ a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF 0.51 36.0 3.24e-01 98.8% 52.2%
1107970 286.1.1.2 ↗ a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF 0.51 37.0 3.23e-01 100.0% 49.6%
5034698 286.1.1.2 ↗ a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF 0.51 37.0 3.20e-01 100.0% 47.7%
3953947 286.1.1.2 ↗ a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF 0.51 37.0 3.37e-01 98.8% 55.7%
3784333 286.1.1.2 ↗ a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF 0.51 38.0 3.16e-01 98.8% 45.7%
5010635 304.102.1.0 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase 0.50 40.0 3.22e-01 86.3% 97.5%
3973107 286.1.1.0 ↗ a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like 0.50 37.0 3.21e-01 98.8% 50.4%
3896560 301.1.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.50 43.0 3.43e-01 97.5% 67.1%