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OR188719.1__WNO25008.1__NKJIMNAM_00027__00027

Bact-Vir

OR188719.1__WNO25008.1__NKJIMNAM_00027__00027

Identity

Accession:
OR188719 ↗
Kingdom:
phage

Quality

93.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pseudomonas_phage_LPPA36

TaxID: 3075042

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-88
PDB
Domain cluster: rep: MW584199.1__QSM04464.1__PROPHIGD02-2_64__00064__D8-88
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04365.20 best BrnT_toxin 84.4 7.40e-24 88.5% 100.0%
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7vd7A01 3.10.450.530 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 0.87 81.0 7.92e-01 98.9% 98.9%
3dasA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.70 50.0 3.34e-01 74.7% 40.4%
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 42.0 4.63e-01 87.4% 74.6%
3ei3A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.67 48.0 3.21e-01 74.7% 30.1%
3u1wA01 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 46.0 3.54e-01 92.0% 33.3%
3hi2B00 3.30.2310.40 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › 0.67 52.0 5.09e-01 85.1% 79.4%
2ckfB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 52.0 4.12e-01 87.4% 71.8%
2aq5A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 44.0 2.91e-01 74.7% 29.9%
3b8lA01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 50.0 4.26e-01 89.7% 72.3%
4hz9B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 50.0 4.47e-01 89.7% 72.4%
3hfqA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 43.0 2.88e-01 74.7% 31.8%
3s8zA02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.60 43.0 2.90e-01 74.7% 43.4%
4wvmA04 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.59 43.0 3.40e-01 78.2% 89.7%
3wa2X01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 45.0 4.60e-01 93.1% 81.6%
3fkaB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 47.0 4.28e-01 87.4% 75.0%
2fblB00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.59 40.0 3.41e-01 70.1% 76.4%
2lexA00 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.59 37.0 4.17e-01 86.2% 87.3%
5b0hA00 2.70.70.10 Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) 0.58 47.0 4.16e-01 89.7% 91.0%
1wmiA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.58 48.0 4.85e-01 90.8% 96.6%
4exrA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 40.0 4.16e-01 74.7% 76.5%
2giaB00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.58 39.0 3.34e-01 70.1% 91.1%
8gq6A01 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.58 45.0 3.12e-01 83.9% 86.2%
2nykA01 3.30.500.30 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.57 40.0 3.36e-01 71.3% 82.4%
4gb5A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 46.0 3.94e-01 89.7% 73.6%
2rfrA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 49.0 4.09e-01 95.4% 73.4%
4orlA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 47.0 4.39e-01 93.1% 82.7%
3gzrB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 47.0 4.07e-01 95.4% 78.7%
3loyA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 50.0 4.73e-01 100.0% 84.2%
1v61A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 47.0 4.15e-01 98.9% 89.4%
2i52B00 3.30.1300.20 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 7,8-dihydroneopterin aldolase (MptD) 0.54 37.0 3.36e-01 70.1% 87.9%
2d44A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 37.0 2.62e-01 73.6% 81.6%
4fflA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.53 41.0 3.01e-01 86.2% 65.6%
3wjcA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 42.0 3.54e-01 87.4% 84.3%
3f40A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 41.0 3.90e-01 88.5% 73.0%
4i79A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 47.0 3.18e-01 100.0% 35.4%
1ntyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 45.0 4.06e-01 98.9% 94.4%
2pvpA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.52 41.0 3.51e-01 87.4% 88.4%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.51 38.0 3.44e-01 78.2% 94.2%
3en8A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 40.0 3.78e-01 88.5% 79.5%
4iwxA03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.51 35.0 3.31e-01 72.4% 78.4%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4966488 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.82 66.0 7.08e-01 89.7% 100.0%
4993636 4312.1.1.15 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.77 58.0 6.38e-01 86.2% 98.6%
5012352 4312.1.1.15 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.75 61.0 6.23e-01 95.4% 90.6%
4968138 4312.1.1.15 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.75 62.0 6.16e-01 90.8% 86.7%
4946882 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.74 46.0 5.60e-01 73.6% 100.0%
4972327 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.74 60.0 5.86e-01 87.4% 88.4%
4992633 4312.1.1.15 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.72 57.0 6.04e-01 92.0% 98.7%
4968686 4312.1.1.15 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.72 63.0 6.02e-01 96.6% 85.0%
4968653 4312.1.1.15 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.72 62.0 6.10e-01 96.6% 88.4%
5071733 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.71 60.0 5.98e-01 94.3% 88.9%
4926940 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.70 60.0 4.82e-01 96.6% 49.7%
3496494 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.70 50.0 3.26e-01 74.7% 28.7%
4937737 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.68 56.0 5.68e-01 89.7% 98.8%
5062732 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.67 56.0 5.74e-01 95.4% 94.1%
3589339 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.67 56.0 5.48e-01 92.0% 88.4%
4937366 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.66 54.0 5.25e-01 88.5% 85.3%
4994079 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.65 50.0 5.37e-01 85.1% 96.0%
3327098 5.1.3.144 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like 0.65 45.0 3.03e-01 71.3% 24.7%
4959385 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.65 51.0 5.38e-01 87.4% 97.3%
5030870 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.65 58.0 5.74e-01 98.9% 96.7%
5081030 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.64 50.0 5.30e-01 85.1% 96.0%
5012403 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 42.0 3.42e-01 71.3% 56.4%
3718124 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.61 54.0 4.26e-01 100.0% 74.7%
4030034 109.4.1.1140 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_PEP5_VPS11 0.61 44.0 2.72e-01 74.7% 20.8%
3546354 5.1.4.164 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_VPS8 0.61 44.0 2.83e-01 74.7% 46.8%
5038444 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.61 41.0 4.50e-01 87.4% 87.1%
3198523 5.1.3.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylesterase 0.61 55.0 3.51e-01 100.0% 32.4%
3286735 243.3.1.3 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.60 43.0 4.42e-01 75.9% 82.4%
3993718 3256.1.1.0 ↗ a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain 0.60 44.0 4.68e-01 86.2% 90.7%
3837575 5.1.3.144 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like 0.59 46.0 3.04e-01 100.0% 20.0%
2605238 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.59 47.0 4.42e-01 87.4% 77.6%
3295586 881.1.1.1 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.59 47.0 3.86e-01 87.4% 89.1%
3520847 243.5.1.0 ↗ a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region 0.58 43.0 4.45e-01 86.2% 85.0%
3589620 4312.1.1.11 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE-like_toxin 0.58 48.0 4.80e-01 92.0% 92.2%
4544637 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.58 47.0 4.63e-01 88.5% 93.5%
3323226 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.58 47.0 3.95e-01 88.5% 83.3%
5041294 5.1.4.665 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_2 0.58 42.0 2.94e-01 78.2% 62.0%
3941306 5.1.3.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylesterase 0.57 51.0 3.42e-01 100.0% 35.1%
3451758 243.5.1.1 ↗ a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › Cu_amine_oxidN2 0.57 51.0 4.78e-01 96.6% 83.8%
3678427 5.1.4.379 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, WD40_2 0.57 44.0 2.99e-01 82.8% 95.8%
5041112 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.56 37.0 4.04e-01 85.1% 84.3%
3222106 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 44.0 4.04e-01 86.2% 87.5%
3601612 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.56 50.0 4.31e-01 100.0% 71.9%
None — 0.55 39.0 2.32e-01 74.7% 48.7%
4993469 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.55 40.0 4.14e-01 86.2% 83.7%
4964119 300.1.1.18 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › FilR1_middle 0.55 42.0 3.47e-01 82.8% 86.3%
3961706 4.1.1.161 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4178 0.54 37.0 4.13e-01 85.1% 93.8%
3817060 109.4.1.1794 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd 0.54 45.0 2.79e-01 90.8% 27.4%
3454685 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.53 46.0 3.14e-01 100.0% 49.3%
3549354 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 47.0 2.87e-01 100.0% 30.4%
3901826 5.1.4.78 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › TFIIIC_delta 0.53 47.0 2.88e-01 100.0% 31.2%
None — 0.52 46.0 2.92e-01 100.0% 32.9%
3167247 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 46.0 3.05e-01 100.0% 26.4%
3360888 5.1.4.298 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd 0.52 44.0 2.76e-01 93.1% 26.5%
5052916 243.1.1.22 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Lumazine_bd_2 0.52 43.0 3.86e-01 93.1% 70.8%
3659427 109.4.1.95 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2 0.52 43.0 2.94e-01 97.7% 45.9%
3233389 5.1.4.139 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_2 0.51 46.0 3.00e-01 100.0% 30.1%
3446031 5.1.1.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed 0.50 43.0 3.38e-01 98.9% 56.5%