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OR188720.1__WNO25032.1__OKBPHCKP_00003__00003

Bact-Vir

OR188720.1__WNO25032.1__OKBPHCKP_00003__00003

Identity

Accession:
OR188720 ↗
Kingdom:
phage

Quality

73.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-48
PDB
Domain cluster: representative
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1xmxA03 1.10.10.680 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Hypothetical protein VC1899 (Restriction endonuclease-like) 0.76 59.0 4.76e-01 88.6% 71.9%
2xi9A03 1.10.150.480 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.71 55.0 4.21e-01 100.0% 37.6%
2af6A02 6.10.140.450 Special › Helix non-globular › Helix Hairpins › 0.70 39.0 3.49e-01 100.0% 37.1%
6oinA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 52.0 4.60e-01 86.4% 95.5%
1vq0A02 3.90.1280.10 Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like 0.68 57.0 5.29e-01 95.5% 75.4%
3ez2A01 1.10.1660.30 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.66 43.0 3.67e-01 88.6% 41.4%
1oltA02 1.10.10.920 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.64 50.0 4.16e-01 88.6% 100.0%
3ulbA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 54.0 4.49e-01 100.0% 59.0%
2lepA00 3.30.70.2350 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 38.0 3.40e-01 97.7% 38.1%
4bkwA02 3.30.1360.220 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Domain of unknown function (DUF3480), N-terminal subdomain 0.63 54.0 4.21e-01 100.0% 57.0%
1qgiA01 3.30.386.10 Alpha Beta › 2-Layer Sandwich › Chitosanase; Chain A, domain 2 › Chitosanase, subunit A, domain 2 0.63 43.0 2.98e-01 77.3% 21.8%
4n1yB00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.63 53.0 3.41e-01 100.0% 33.0%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 49.0 3.95e-01 95.5% 44.7%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 47.0 3.27e-01 95.5% 24.5%
6g1dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 47.0 3.94e-01 95.5% 46.3%
4i2oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 49.0 4.14e-01 95.5% 97.5%
3qthB00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.61 51.0 3.53e-01 100.0% 46.3%
1qqgA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 52.0 3.99e-01 100.0% 43.7%
5fb0A02 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.60 51.0 3.84e-01 100.0% 39.3%
1b4bA00 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.60 50.0 4.39e-01 100.0% 91.5%
1yg2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 49.0 4.20e-01 100.0% 97.5%
2x49A04 3.40.50.12790 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › FHIPEP family, domain 4 0.59 45.0 3.51e-01 100.0% 38.4%
6h9dA00 1.10.530.40 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.59 44.0 3.15e-01 84.1% 31.8%
1cboA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 49.0 3.00e-01 100.0% 34.6%
4gcvC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 42.0 2.98e-01 77.3% 40.4%
3qyfA03 1.10.10.1690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Uncharacterised CRISPR-associated protein family, UPF0236 0.58 47.0 4.27e-01 93.2% 96.7%
4n81A01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.58 47.0 3.46e-01 100.0% 86.0%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.58 47.0 3.71e-01 100.0% 44.0%
3ar4A04 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.58 45.0 2.79e-01 100.0% 15.6%
3ja8601 3.30.1640.10 Alpha Beta › 2-Layer Sandwich › mini-chromosome maintenance (MCM) complex, chain A, domain 1 › mini-chromosome maintenance (MCM) complex, chain A, domain 1 0.58 45.0 3.39e-01 86.4% 56.2%
1gkuB06 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.57 46.0 3.29e-01 100.0% 50.6%
4kdyB01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.57 43.0 3.73e-01 90.9% 73.8%
1bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 44.0 3.51e-01 88.6% 69.5%
2wbtB02 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.56 41.0 3.92e-01 79.5% 92.3%
8dgfB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 45.0 3.08e-01 100.0% 62.8%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 45.0 3.78e-01 100.0% 76.7%
7dklA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 48.0 3.60e-01 100.0% 52.6%
3r4iA02 6.10.140.960 Special › Helix non-globular › Helix Hairpins › 0.55 43.0 4.08e-01 100.0% 78.3%
3c1dB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 46.0 4.17e-01 100.0% 67.7%
1mo7A00 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.55 43.0 2.85e-01 95.5% 80.3%
2bgcA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 46.0 3.57e-01 97.7% 51.5%
3gwiA00 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.54 46.0 3.11e-01 95.5% 88.4%
6e94A02 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.54 36.0 3.38e-01 75.0% 55.4%
2fa5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 39.0 2.87e-01 84.1% 41.0%
3g1pA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.53 38.0 2.43e-01 79.5% 38.2%
5hvqC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 3.33e-01 93.2% 71.4%
2jugA01 1.10.10.1830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Non-ribosomal peptide synthase, adenylation domain 0.52 40.0 3.82e-01 88.6% 76.4%
3fnrA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.52 42.0 2.58e-01 93.2% 53.0%
2lqoA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.52 41.0 3.43e-01 95.5% 94.3%
5ttjA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 41.0 2.65e-01 90.9% 38.0%
1omsA00 3.30.70.1050 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trigger factor ribosome-binding domain 0.50 41.0 3.10e-01 93.2% 51.8%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3740384 1021.1.1.0 a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases 0.81 62.0 5.47e-01 97.7% 56.9%
4984241 2002.1.1.111 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI 0.74 56.0 3.39e-01 100.0% 12.5%
3401425 603.1.1.104 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › 7tm_7 0.74 60.0 3.49e-01 100.0% 10.8%
3555108 109.4.1.235 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SRP68 0.72 55.0 3.07e-01 100.0% 7.4%
3606470 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.69 65.0 4.07e-01 100.0% 23.1%
3593719 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.68 63.0 4.00e-01 100.0% 24.3%
3714994 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.68 62.0 3.91e-01 100.0% 23.1%
3598773 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.67 61.0 3.80e-01 100.0% 20.5%
4857394 5054.1.1.6 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH 0.67 51.0 3.72e-01 100.0% 29.8%
3947081 4210.1.1.0 a+b two layers › WGR domain › WGR domain › WGR domain 0.66 57.0 5.08e-01 100.0% 87.5%
3496192 109.4.1.1297 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIMELESS, PF27570 0.66 48.0 2.67e-01 100.0% 5.9%
4978597 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.65 45.0 3.03e-01 75.0% 47.0%
3761667 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.65 51.0 4.14e-01 100.0% 47.5%
4457710 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.64 54.0 3.89e-01 100.0% 34.2%
4944116 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 53.0 4.28e-01 100.0% 82.1%
4014117 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.64 49.0 3.04e-01 100.0% 12.9%
3916907 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.63 57.0 3.43e-01 100.0% 22.8%
3822811 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.63 49.0 3.92e-01 93.2% 42.2%
3602631 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.62 52.0 4.38e-01 100.0% 85.0%
4453560 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 49.0 3.80e-01 100.0% 67.8%
4509560 2002.1.1.111 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI 0.61 48.0 3.02e-01 100.0% 15.7%
4948599 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.61 51.0 4.06e-01 100.0% 46.7%
4030787 605.1.1.303 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Terminase_4 0.60 50.0 3.82e-01 100.0% 41.0%
3710396 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 41.0 2.62e-01 95.5% 16.3%
4931635 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.60 51.0 4.22e-01 100.0% 86.9%
4981233 2002.1.1.111 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI 0.60 48.0 3.02e-01 100.0% 15.4%
3954362 1022.2.1.1 alpha arrays › 4Fe-4S binding domain in Dna2 › 4Fe-4S protein WhiB1 › 4Fe-4S protein WhiB1 › Whib 0.60 50.0 3.86e-01 100.0% 47.3%
4073860 5086.1.1.67 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › Neurensin 0.59 42.0 2.96e-01 100.0% 24.4%
4981980 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.59 48.0 3.70e-01 100.0% 41.7%
3187789 2002.1.1.111 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI 0.59 47.0 2.87e-01 100.0% 13.1%
5053119 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 49.0 3.62e-01 95.5% 40.0%
3164257 2002.1.1.111 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI 0.59 47.0 2.97e-01 100.0% 16.6%
4858145 2002.1.1.111 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI 0.59 42.0 2.75e-01 97.7% 14.7%
3284225 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.58 50.0 4.13e-01 100.0% 53.8%
3973617 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.58 42.0 2.72e-01 97.7% 14.4%
3976992 2002.1.1.300 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI, C-C_Bond_Lyase 0.58 47.0 2.95e-01 100.0% 16.6%
3646228 101.1.10.1 alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.58 50.0 3.45e-01 100.0% 45.0%
4927722 101.1.17.0 alpha arrays › HTH › HTH › FF domain 0.58 44.0 3.30e-01 97.7% 33.6%
5023013 109.2.1.0 alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid 0.57 47.0 3.09e-01 100.0% 22.8%
5067232 4018.1.1.2 a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P 0.57 45.0 3.33e-01 100.0% 88.3%
5010704 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 49.0 3.48e-01 100.0% 68.6%
3731014 2002.1.1.111 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI 0.57 45.0 2.80e-01 100.0% 14.4%
2613 101.1.2.105 alpha arrays › HTH › HTH › winged helix domain › MotA_activ 0.56 44.0 3.51e-01 88.6% 69.5%
5073893 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 45.0 3.74e-01 93.2% 80.0%
1240484 2002.1.1.111 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI 0.55 43.0 2.70e-01 100.0% 14.7%
5039734 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 45.0 4.06e-01 95.5% 92.2%
3401268 386.1.1.1 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.54 37.0 3.20e-01 84.1% 42.7%
5046209 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 40.0 3.42e-01 88.6% 98.8%
5024301 101.1.2.404 alpha arrays › HTH › HTH › winged helix domain › DUF505 0.53 44.0 3.62e-01 95.5% 84.7%
5063520 5104.1.1.1 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 0.52 46.0 3.38e-01 100.0% 40.0%
184685 6051.5.1.1 alpha duplicates or obligate multimers › Docking domains in modular polyketide synthases › Class 3 N-terminal docking domain › Class 3 N-terminal docking domain › TubC_N 0.52 40.0 3.46e-01 90.9% 55.1%
4316044 101.1.2.388 alpha arrays › HTH › HTH › winged helix domain › YjhX_toxin 0.52 38.0 3.36e-01 100.0% 68.9%
4680369 2485.1.1.64 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › DUF1450 0.52 42.0 3.62e-01 100.0% 93.7%
3990729 101.1.15.1 alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.51 41.0 3.45e-01 95.5% 77.8%