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OR195044.1__WNM72272.1__SEA_GUSANITA_53__00051

Bact-Vir

OR195044.1__WNM72272.1__SEA_GUSANITA_53__00051

Identity

Accession:
OR195044 ↗
Kingdom:
phage

Quality

83.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Arthrobacter_phage_Gusanita

TaxID: 3043914

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-129
PDB
Domain cluster: rep: IMGVR_UViG_3300028564_000083-3300028564-Ga0255344_100350621__D115-222
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4trtA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.90 73.0 7.46e-01 100.0% 86.9%
4trtA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.90 71.0 7.43e-01 100.0% 88.2%
1vpkA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.90 74.0 7.44e-01 100.0% 85.2%
1vpkA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.90 72.0 7.51e-01 100.0% 89.2%
5agvA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.89 71.0 7.24e-01 100.0% 85.5%
3t0pA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.88 71.0 6.34e-01 100.0% 62.2%
6ptrB01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.86 69.0 7.38e-01 100.0% 94.7%
3pweA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.86 70.0 7.13e-01 100.0% 87.8%
2avtB01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.85 70.0 6.24e-01 100.0% 63.4%
4trtA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.85 71.0 7.31e-01 100.0% 91.7%
3t0pA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.85 68.0 5.80e-01 100.0% 54.9%
1vpkA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.84 68.0 7.09e-01 100.0% 90.8%
6ap4B02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.84 76.0 7.34e-01 100.0% 85.8%
4tr6A01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.83 72.0 6.29e-01 100.0% 63.9%
5agvA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.83 72.0 7.22e-01 100.0% 89.3%
2avtA02 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.82 68.0 5.76e-01 100.0% 55.8%
5w7zA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.82 66.0 7.02e-01 100.0% 94.7%
3p91A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.81 65.0 5.15e-01 100.0% 44.1%
1ge8A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.80 67.0 5.32e-01 100.0% 47.1%
1rwzA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.80 65.0 5.16e-01 100.0% 45.1%
1ud9A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.79 65.0 5.17e-01 100.0% 45.9%
2ix2B00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.79 65.0 5.15e-01 100.0% 45.3%
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.79 65.0 5.21e-01 100.0% 46.7%
4rkiA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.77 66.0 6.65e-01 100.0% 88.5%
1u7bA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.77 64.0 5.05e-01 100.0% 45.0%
3a1jB00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.77 63.0 4.87e-01 100.0% 41.3%
1plqA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.77 66.0 5.12e-01 100.0% 45.0%
1sxjH01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.76 65.0 6.62e-01 100.0% 92.7%
6j8yC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.76 64.0 5.05e-01 100.0% 45.1%
1sxjH02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.76 65.0 6.56e-01 100.0% 90.6%
3d4eA01 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.75 27.0 3.32e-01 100.0% 48.8%
2qzuA02 3.30.1120.10 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.71 25.0 3.10e-01 100.0% 47.1%
1b77A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.69 54.0 4.44e-01 100.0% 46.5%
8dqwG01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.68 63.0 5.67e-01 100.0% 74.3%
1t6cA02 3.30.420.150 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 0.59 32.0 2.85e-01 88.3% 36.5%
2r41A00 3.10.450.150 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein 0.56 37.0 4.06e-01 100.0% 82.5%
6mv2A01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 34.0 3.75e-01 89.1% 78.4%
4csbA00 2.40.128.480 Mainly Beta › Beta Barrel › Lipocalin › Rhodococcus equi virulence-associated protein 0.54 37.0 3.91e-01 87.5% 80.5%
5mc9A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 37.0 3.29e-01 100.0% 50.0%
1zsqA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 29.0 3.19e-01 89.8% 64.4%
ECOD (88)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4591776 227.1.1.7 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.91 76.0 7.63e-01 100.0% 85.4%
3015240 227.1.1.7 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.91 74.0 7.65e-01 100.0% 88.5%
2987540 227.1.1.3 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.91 73.0 7.29e-01 100.0% 81.5%
3963789 227.1.1.7 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.91 75.0 7.76e-01 100.0% 90.8%
1549269 227.1.1.3 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.90 73.0 7.49e-01 100.0% 87.6%
3015241 227.1.1.3 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.90 73.0 7.56e-01 100.0% 89.9%
1549270 227.1.1.7 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.90 71.0 7.49e-01 100.0% 89.7%
1013950 227.1.1.7 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.90 74.0 7.59e-01 100.0% 89.3%
5978 227.1.1.7 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.90 74.0 7.57e-01 100.0% 88.6%
5977 227.1.1.3 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.90 72.0 7.51e-01 100.0% 89.2%
3281112 227.1.1.7 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.89 73.0 7.56e-01 99.2% 90.0%
2878142 227.1.1.7 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.89 74.0 7.55e-01 100.0% 88.6%
144176 227.1.1.7 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.89 74.0 7.57e-01 100.0% 88.7%
4194202 227.1.1.7 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.89 74.0 7.48e-01 100.0% 87.2%
4480621 227.1.1.3 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.89 71.0 7.40e-01 100.0% 88.3%
4083029 227.1.1.7 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.88 73.0 7.39e-01 100.0% 87.2%
1871494 227.1.1.3 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.88 71.0 7.35e-01 100.0% 88.4%
4069893 227.1.1.7 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.88 72.0 7.35e-01 100.0% 87.2%
2392242 227.1.1.3 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.88 66.0 7.04e-01 100.0% 87.6%
4050655 227.1.1.7 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.88 72.0 7.21e-01 100.0% 83.8%
2878151 227.1.1.3 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.88 71.0 7.29e-01 100.0% 88.4%
3015239 227.1.1.8 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.87 69.0 7.21e-01 100.0% 88.2%
4146527 227.1.1.7 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.87 74.0 7.41e-01 100.0% 86.9%
3387600 227.1.1.3 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.87 70.0 7.26e-01 100.0% 89.2%
4047098 227.1.1.3 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.86 72.0 7.41e-01 100.0% 91.7%
4650306 227.1.1.3 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.86 70.0 7.27e-01 100.0% 90.0%
4102438 227.1.1.3 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.86 70.0 7.24e-01 100.0% 90.0%
2522057 227.1.1.3 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.86 69.0 7.10e-01 100.0% 87.0%
159555 227.1.1.7 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.86 71.0 7.17e-01 100.0% 86.6%
4860663 227.1.1.3 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.86 69.0 6.73e-01 100.0% 77.1%
4251800 227.1.1.3 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.86 69.0 6.88e-01 100.0% 82.3%
4460376 227.1.1.7 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.86 69.0 7.16e-01 100.0% 89.2%
4234515 227.1.1.3 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.85 70.0 7.24e-01 100.0% 90.8%
4876748 227.1.1.3 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.85 69.0 7.03e-01 100.0% 87.1%
426904 227.1.1.8 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.84 68.0 6.95e-01 100.0% 87.0%
2141304 227.1.1.7 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.84 75.0 7.48e-01 100.0% 90.8%
4315973 227.1.1.3 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.84 71.0 7.17e-01 100.0% 89.6%
2476832 227.1.1.3 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.83 72.0 7.10e-01 100.0% 85.2%
3388280 227.1.1.7 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.83 66.0 6.79e-01 100.0% 87.5%
4460660 227.1.1.7 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.83 72.0 7.13e-01 100.0% 86.7%
158230 227.1.1.3 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.83 71.0 7.14e-01 100.0% 89.8%
4372908 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.83 66.0 6.75e-01 100.0% 85.6%
2492033 227.1.1.3 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.82 72.0 6.96e-01 100.0% 83.6%
1157731 6043.1.1.3 ↗ a+b two layers › yfeY-like › yfeY-like › yfeY-like › CAP_assoc_N 0.81 26.0 3.38e-01 100.0% 48.1%
224047 6043.1.1.3 ↗ a+b two layers › yfeY-like › yfeY-like › yfeY-like › CAP_assoc_N 0.81 26.0 3.70e-01 100.0% 57.6%
143428 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.81 65.0 6.73e-01 100.0% 90.0%
2588759 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.80 67.0 6.93e-01 100.0% 92.6%
5033948 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.80 66.0 6.59e-01 100.0% 85.4%
5043507 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.80 68.0 7.00e-01 100.0% 95.0%
5991 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.80 65.0 6.71e-01 100.0% 90.2%
4934002 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.79 66.0 6.62e-01 100.0% 86.2%
5011281 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.79 65.0 6.65e-01 100.0% 88.8%
4941929 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.79 66.0 6.62e-01 100.0% 87.5%
4569733 227.1.1.7 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.79 72.0 6.95e-01 100.0% 87.9%
4456195 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.79 65.0 6.72e-01 100.0% 92.5%
167574 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.79 65.0 6.48e-01 100.0% 84.7%
4936049 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.79 63.0 6.50e-01 100.0% 89.2%
5039027 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.78 64.0 6.62e-01 100.0% 91.7%
5037314 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.78 65.0 6.74e-01 100.0% 93.3%
5028024 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.78 65.0 6.51e-01 100.0% 86.2%
4948360 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.78 64.0 6.46e-01 100.0% 86.0%
4517015 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.78 65.0 6.59e-01 100.0% 90.3%
4991675 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.78 65.0 6.62e-01 100.0% 90.4%
4976500 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.78 65.0 6.51e-01 100.0% 87.5%
5029787 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.78 63.0 6.57e-01 100.0% 91.7%
3997015 227.1.1.4 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.77 67.0 6.67e-01 100.0% 89.2%
309454 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.77 64.0 6.40e-01 100.0% 84.8%
5037345 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.77 67.0 6.64e-01 100.0% 88.0%
5010672 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.77 64.0 6.63e-01 100.0% 93.3%
3624708 227.1.1.4 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.77 66.0 6.54e-01 100.0% 85.9%
4943405 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.77 65.0 6.59e-01 100.0% 91.2%
1290662 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.77 67.0 6.41e-01 100.0% 81.8%
5027067 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.77 65.0 6.72e-01 100.0% 95.8%
4980359 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.76 61.0 6.36e-01 100.0% 90.0%
5059299 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.76 61.0 6.28e-01 100.0% 89.2%
3251045 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.76 64.0 6.04e-01 100.0% 74.7%
4212381 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.76 65.0 6.36e-01 100.0% 85.2%
3791518 227.1.1.3 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta 0.76 62.0 6.40e-01 100.0% 90.8%
1760289 809.1.1.3 ↗ a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › DUF3862 0.75 27.0 3.32e-01 100.0% 48.8%
4929645 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.75 63.0 6.44e-01 100.0% 91.2%
3292092 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.75 67.0 6.58e-01 100.0% 89.6%
3719143 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.75 66.0 6.51e-01 100.0% 88.9%
4619259 227.1.1.4 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.75 65.0 6.23e-01 100.0% 81.4%
3932751 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.74 64.0 6.43e-01 100.0% 90.0%
4026069 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.73 64.0 6.34e-01 100.0% 88.1%
4030418 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.71 65.0 6.33e-01 100.0% 90.0%
5074320 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.70 60.0 6.04e-01 100.0% 91.5%
4027851 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.69 63.0 6.09e-01 100.0% 90.3%
D2 medium residues 139-233
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2z0lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.61 49.0 3.50e-01 88.4% 73.5%
4v0bA00 3.30.720.210 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.57 30.0 3.52e-01 82.1% 73.0%
1b44D00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 30.0 2.95e-01 75.8% 44.3%
3e9mB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.53 39.0 3.12e-01 78.9% 86.9%
3lm4A01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.52 36.0 3.23e-01 71.6% 84.6%
7yh1A01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.52 32.0 3.02e-01 86.3% 51.8%
8aa0E01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.52 42.0 2.96e-01 88.4% 59.5%
2v43A01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.51 37.0 2.97e-01 78.9% 38.8%
3oajA02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.51 35.0 3.06e-01 71.6% 86.1%
2pt7C01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.51 33.0 3.19e-01 71.6% 57.5%
4ohxA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 36.0 2.81e-01 76.8% 100.0%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5047575 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.69 51.0 4.61e-01 76.8% 100.0%
3175415 211.1.1.55 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › PF29700 0.58 36.0 4.32e-01 82.1% 98.3%
4988423 4210.1.1.0 ↗ a+b two layers › WGR domain › WGR domain › WGR domain 0.57 38.0 4.08e-01 83.2% 80.0%
4996248 331.19.1.0 ↗ a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains 0.56 35.0 3.57e-01 77.9% 64.4%
3514049 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.54 48.0 3.39e-01 100.0% 88.9%
1114459 109.21.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleopor_Nup85 0.52 30.0 2.15e-01 96.8% 17.8%
3715774 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.52 36.0 3.07e-01 70.5% 58.7%
3801954 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.52 42.0 2.91e-01 90.5% 56.6%
5050910 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 30.0 2.85e-01 87.4% 48.7%