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OR195048.1__WNM72602.1__SEA_BOMBITAS_41__00041

Bact-Vir

OR195048.1__WNM72602.1__SEA_BOMBITAS_41__00041

Identity

Accession:
OR195048 ↗
Kingdom:
phage

Quality

85.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Omegavirus› Mycobacterium_phage_Bombitas

TaxID: 3043907

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 40-221
PDB
Domain cluster: rep: ALT_09252017_20_scaffold_206_prodigal-single.1__X__X__00072__D232-420
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13385.14 best Laminin_G_3 49.5 7.10e-13 80.8% 96.7%
D2 medium residues 246-369
PDB
Domain cluster: representative
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5028868 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.87 68.0 6.96e-01 100.0% 82.5%
D3 medium residues 407-537_594-618
PDB
Domain cluster: representative
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ozvA00 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.63 57.0 4.45e-01 99.4% 99.7%
4neiA01 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.62 55.0 4.31e-01 98.1% 71.6%
3gt5A00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.62 54.0 4.03e-01 94.9% 52.2%
3a0oA02 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.62 55.0 4.18e-01 97.4% 92.3%
7fhyB01 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.61 53.0 4.32e-01 92.9% 84.2%
2fbnA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.61 42.0 4.32e-01 76.3% 71.9%
1ia6A00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.61 52.0 3.80e-01 91.7% 72.8%
1fp3A00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.58 51.0 3.78e-01 94.9% 45.5%
4fnvA01 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.58 53.0 4.00e-01 100.0% 74.3%
3nb2A02 1.25.40.300 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Putative secreted effector protein 0.56 41.0 4.11e-01 94.2% 74.8%
4u2xF00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.56 40.0 3.89e-01 76.3% 66.3%
1fmiA00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.55 47.0 3.45e-01 94.2% 63.4%
4ap2B01 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.52 38.0 4.07e-01 75.0% 93.3%
2n1rA00 1.10.150.90 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Immunodeficiency lentiviruses, gag gene matrix protein p17 0.51 28.0 3.06e-01 87.8% 60.4%
1ax8A00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.51 28.0 3.02e-01 84.6% 62.3%
3au3A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.50 43.0 3.49e-01 92.3% 48.8%
3nowA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.50 43.0 3.30e-01 92.3% 54.7%
4crwA00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.50 42.0 3.76e-01 94.2% 62.8%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3779354 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 46.0 4.00e-01 76.3% 53.5%
3194865 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 46.0 3.97e-01 78.2% 69.2%
3417818 101.1.1.138 ↗ alpha arrays › HTH › HTH › Three-helical HTH › GeBP-like_DBD 0.61 30.0 3.77e-01 78.8% 76.8%
4881792 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.59 42.0 4.40e-01 73.1% 96.6%
4030442 109.17.1.5 ↗ alpha superhelices › Repetitive alpha hairpins › Proteasome activator BLM10 › Proteasome activator BLM10 › PSME4_C 0.59 48.0 2.69e-01 86.5% 9.6%
3183125 109.4.1.356 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.59 45.0 3.05e-01 80.1% 62.7%
4956756 109.2.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid 0.57 49.0 3.77e-01 94.9% 42.4%
3726222 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.57 44.0 3.88e-01 81.4% 85.7%
4268446 109.4.1.356 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.56 43.0 3.13e-01 80.8% 72.2%
3740420 109.4.1.451 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Iml2-TPR_39 0.53 46.0 3.75e-01 95.5% 59.0%
3691707 109.4.1.550 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARMH3_C 0.53 46.0 3.07e-01 92.9% 91.5%
5083908 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.53 35.0 3.90e-01 70.5% 85.8%
3614086 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 46.0 2.81e-01 94.2% 17.8%
3789339 109.4.1.356 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.53 45.0 3.25e-01 93.6% 43.0%
3413450 109.4.1.704 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › P4Ha_N 0.51 37.0 3.49e-01 77.6% 61.6%
3515944 109.4.1.443 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MOR2-PAG1_C 0.50 43.0 3.40e-01 92.9% 45.1%
3415942 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.50 36.0 3.89e-01 73.1% 87.7%
3749171 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.50 42.0 3.71e-01 90.4% 69.4%
3200320 109.54.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › Utp21 0.50 37.0 3.25e-01 77.6% 66.0%
3614117 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.50 40.0 3.32e-01 92.3% 47.0%
D4 medium residues 538-593_619-706
PDB
Domain cluster: representative