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OR195048.1__WNM72704.1__SEA_BOMBITAS_146__00146
Bact-VirOR195048.1__WNM72704.1__SEA_BOMBITAS_146__00146
Identity
- Accession:
- OR195048 ↗
- Kingdom:
- phage
Quality
89.9
mean pLDDT
Taxonomy
TaxID: 3043907
Cluster
View cluster (66 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 30-132
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4okeA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.78 | 72.0 | 6.12e-01 | 100.0% | 63.7% |
| 3mwpB02 | 3.30.420.410 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Arenaviral nucleoprotein, C-terminal domain | 0.78 | 64.0 | 5.35e-01 | 100.0% | 52.6% |
| 1wljA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.73 | 63.0 | 5.29e-01 | 100.0% | 56.5% |
| 1noyB02 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.64 | 59.0 | 4.52e-01 | 100.0% | 57.1% |
| 3a54A01 | 2.40.50.340 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.62 | 30.0 | 3.16e-01 | 82.5% | 48.9% |
| 1wiiA01 | 2.20.25.190 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.60 | 26.0 | 3.39e-01 | 78.6% | 69.4% |
| 2ywqA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.59 | 31.0 | 3.36e-01 | 78.6% | 60.2% |
| 2pm9A02 | 2.20.25.400 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.58 | 20.0 | 3.20e-01 | 99.0% | 96.7% |
| 2x6nD00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.55 | 39.0 | 3.21e-01 | 100.0% | 42.1% |
| 5cz2C00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.55 | 38.0 | 3.37e-01 | 100.0% | 49.3% |
| 1gqeA03 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 29.0 | 3.26e-01 | 79.6% | 66.3% |
| 6a8mA01 | 3.40.350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain | 0.53 | 49.0 | 4.09e-01 | 100.0% | 71.3% |
| 3f6gA01 | 3.30.160.740 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 29.0 | 3.74e-01 | 100.0% | 98.3% |
| 1xknA00 | 3.75.10.10 | Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A | 0.50 | 42.0 | 2.98e-01 | 95.1% | 90.9% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3988496 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.84 | 75.0 | 5.74e-01 | 100.0% | 45.1% |
| 4102293 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.81 | 73.0 | 5.86e-01 | 100.0% | 52.6% |
| 4052322 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.80 | 71.0 | 5.74e-01 | 100.0% | 51.6% |
| 3706908 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.79 | 74.0 | 5.27e-01 | 100.0% | 37.9% |
| 3962916 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.79 | 73.0 | 6.27e-01 | 100.0% | 66.7% |
| 3942728 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.79 | 72.0 | 5.59e-01 | 100.0% | 48.1% |
| 3402227 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.78 | 74.0 | 5.56e-01 | 100.0% | 56.9% |
| 3951613 | 2484.1.1.73 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Rv2179c-like | 0.78 | 72.0 | 6.08e-01 | 100.0% | 61.8% |
| 5068292 | 2484.1.1.68 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H_2 | 0.78 | 53.0 | 4.22e-01 | 100.0% | 36.9% |
| 3893443 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.78 | 73.0 | 5.55e-01 | 100.0% | 47.3% |
| 3950901 | 2484.1.1.73 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Rv2179c-like | 0.78 | 72.0 | 6.02e-01 | 100.0% | 61.8% |
| 1866795 | 2484.1.1.91 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Exu_RNase_H_like | 0.77 | 73.0 | 5.45e-01 | 100.0% | 51.5% |
| 4290521 | 2484.1.1.91 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Exu_RNase_H_like | 0.77 | 73.0 | 5.22e-01 | 100.0% | 44.2% |
| 3219941 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.76 | 65.0 | 5.08e-01 | 100.0% | 45.2% |
| 3916593 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.76 | 65.0 | 5.01e-01 | 100.0% | 43.2% |
| 3947357 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.76 | 70.0 | 5.71e-01 | 100.0% | 56.8% |
| 4025342 | 2484.1.1.20 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 | 0.75 | 53.0 | 3.94e-01 | 100.0% | 30.8% |
| 3997241 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.75 | 65.0 | 5.91e-01 | 100.0% | 71.4% |
| None | — | 0.75 | 65.0 | 5.03e-01 | 100.0% | 44.2% | |
| 3238194 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.75 | 64.0 | 4.93e-01 | 100.0% | 42.9% |
| 3780327 | 2484.1.1.168 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › EloA-BP1 | 0.75 | 64.0 | 4.99e-01 | 100.0% | 44.2% |
| 3487266 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.75 | 64.0 | 4.90e-01 | 100.0% | 42.2% |
| 3485158 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.75 | 64.0 | 4.89e-01 | 100.0% | 42.2% |
| 3599368 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.74 | 68.0 | 5.05e-01 | 100.0% | 46.4% |
| 3612874 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.74 | 67.0 | 4.86e-01 | 100.0% | 41.4% |
| 3778350 | 2484.1.1.20 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 | 0.72 | 50.0 | 3.68e-01 | 100.0% | 28.5% |
| 5005271 | 2484.1.1.68 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H_2 | 0.71 | 49.0 | 4.19e-01 | 100.0% | 46.2% |
| 3759576 | 2484.1.1.288 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PML_C | 0.71 | 53.0 | 3.93e-01 | 100.0% | 31.8% |
| 3274022 | 2484.1.1.20 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 | 0.70 | 50.0 | 3.73e-01 | 100.0% | 30.2% |
| 4944397 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 27.0 | 3.91e-01 | 77.7% | 78.0% |
| 4939488 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.68 | 56.0 | 3.96e-01 | 100.0% | 31.0% |
| 3193711 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.67 | 50.0 | 3.84e-01 | 100.0% | 34.9% |
| 5081878 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.65 | 49.0 | 3.33e-01 | 100.0% | 22.8% |
| 3635955 | 2484.1.1.20 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 | 0.64 | 49.0 | 3.67e-01 | 100.0% | 33.2% |
| 4028087 | 2484.1.1.20 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 | 0.63 | 48.0 | 3.75e-01 | 100.0% | 38.6% |
| 4452101 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.60 | 50.0 | 3.92e-01 | 100.0% | 42.7% |
| 2801086 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.60 | 50.0 | 3.42e-01 | 100.0% | 26.1% |
| 4282509 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.60 | 50.0 | 3.12e-01 | 100.0% | 16.6% |
| 5050109 | 375.1.1.31 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 | 0.55 | 25.0 | 2.81e-01 | 78.6% | 52.9% |
| 4283257 | 243.3.1.52 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › UPF0182 | 0.54 | 32.0 | 2.25e-01 | 79.6% | 17.9% |
| 3738058 | 247.1.1.7 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › PDEase_II | 0.54 | 46.0 | 3.30e-01 | 95.1% | 87.1% |
| 3512466 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 40.0 | 3.81e-01 | 100.0% | 65.6% |
| 3463266 | 4325.1.1.0 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like | 0.53 | 29.0 | 3.63e-01 | 80.6% | 90.0% |
| 4939931 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 37.0 | 3.33e-01 | 100.0% | 50.7% |
| 3372819 | 330.3.1.1 ↗ | a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like › RF-1 | 0.53 | 29.0 | 3.04e-01 | 80.6% | 57.9% |
| 3934731 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.52 | 37.0 | 3.15e-01 | 100.0% | 44.7% |
| 4983425 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.51 | 40.0 | 2.66e-01 | 85.4% | 48.9% |
| 4091986 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.51 | 35.0 | 3.44e-01 | 100.0% | 64.3% |
| 5073559 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 44.0 | 3.29e-01 | 97.1% | 67.6% |
D2
high
residues 142-202
Domain cluster:
representative
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1j54A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.82 | 66.0 | 4.66e-01 | 88.5% | 30.5% |
| 1qguB04 | 1.20.89.10 | Mainly Alpha › Up-down Bundle › Nitrogenase Molybdenum-iron Protein, subunit B; domain 4 › Nitrogenase Molybdenum-iron Protein, subunit B, domain 4 | 0.75 | 44.0 | 3.94e-01 | 100.0% | 42.2% |
| 1v4aA01 | 1.10.4050.10 | Mainly Alpha › Orthogonal Bundle › Nucleotidyltransferase substrate binding subunit/domain fold › Glutamine synthase adenylyltransferase GlnE | 0.72 | 50.0 | 4.07e-01 | 86.9% | 40.4% |
| 4akgA14 | 1.20.1280.160 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.63 | 54.0 | 4.38e-01 | 91.8% | 72.5% |
| 4zvaA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.63 | 45.0 | 3.36e-01 | 83.6% | 30.9% |
| 3wfwA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.63 | 47.0 | 3.54e-01 | 88.5% | 34.8% |
| 2a3vB01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.63 | 39.0 | 3.37e-01 | 82.0% | 41.5% |
| 1m3sB00 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.62 | 54.0 | 3.88e-01 | 98.4% | 65.6% |
| 2xzmV01 | 1.10.60.20 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 | 0.62 | 38.0 | 3.85e-01 | 82.0% | 62.3% |
| 7b7tA01 | 1.20.1270.30 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.61 | 55.0 | 3.97e-01 | 98.4% | 89.4% |
| 1a22A00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.61 | 48.0 | 3.42e-01 | 85.2% | 88.9% |
| 2lqxA00 | 6.10.250.1700 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.61 | 35.0 | 4.12e-01 | 78.7% | 85.4% |
| 3a06B03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.59 | 52.0 | 4.63e-01 | 98.4% | 72.7% |
| 3swhA01 | 1.10.357.50 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.59 | 47.0 | 3.43e-01 | 86.9% | 78.2% |
| 1uurA01 | 1.20.58.240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 | 0.58 | 44.0 | 3.55e-01 | 85.2% | 44.5% |
| 2icwG02 | 1.10.10.530 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › mam-mhc complex, Chain D, Domain 2 | 0.57 | 41.0 | 3.69e-01 | 85.2% | 52.8% |
| 1v9mA03 | 1.20.1690.10 | Mainly Alpha › Up-down Bundle › V-type ATP synthase subunit C fold › V-type ATP synthase subunit C domain | 0.57 | 48.0 | 4.17e-01 | 95.1% | 93.8% |
| 4l8iB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.57 | 47.0 | 3.79e-01 | 88.5% | 59.8% |
| 1lkvX02 | 1.10.220.30 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Flagellar motor switch protein FliG, alpha-alpha superhelical domain | 0.57 | 50.0 | 3.88e-01 | 98.4% | 65.9% |
| 2gf4A00 | 1.20.1270.110 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Uncharacterised protein family UPF0058 | 0.57 | 49.0 | 4.40e-01 | 100.0% | 73.9% |
| 2m6uA00 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.56 | 49.0 | 4.47e-01 | 98.4% | 87.8% |
| 1gt0D00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.56 | 44.0 | 4.01e-01 | 83.6% | 82.3% |
| 2wusS00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.56 | 45.0 | 4.11e-01 | 88.5% | 74.4% |
| 1e1dA02 | 1.20.1270.20 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.56 | 48.0 | 4.38e-01 | 98.4% | 78.6% |
| 3hmfA00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.56 | 44.0 | 3.50e-01 | 83.6% | 95.7% |
| 7zxkC01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.56 | 46.0 | 3.40e-01 | 88.5% | 94.7% |
| 1yozA00 | 1.10.3200.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › AF0941-like | 0.55 | 44.0 | 3.54e-01 | 85.2% | 49.6% |
| 3acxA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.55 | 50.0 | 3.19e-01 | 100.0% | 47.9% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.55 | 44.0 | 4.35e-01 | 88.5% | 81.5% |
| 1w36F02 | 1.10.10.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.54 | 44.0 | 3.75e-01 | 98.4% | 55.0% |
| 3ejbH02 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.52 | 46.0 | 3.03e-01 | 100.0% | 49.2% |
| 3sqiA01 | 1.10.150.540 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.52 | 41.0 | 3.46e-01 | 90.2% | 50.5% |
| 1b5lA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.52 | 46.0 | 3.46e-01 | 100.0% | 91.4% |
| 3uumA00 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 47.0 | 3.71e-01 | 100.0% | 77.0% |
| 2ds2D01 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.52 | 35.0 | 3.60e-01 | 82.0% | 71.9% |
| 5nohA00 | 1.20.120.1350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pneumovirus matrix protein 2 (M2), zinc-binding domain | 0.52 | 41.0 | 3.59e-01 | 93.4% | 97.1% |
| 3pe0A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 46.0 | 3.77e-01 | 98.4% | 83.0% |
| 4ol8B03 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.50 | 41.0 | 3.71e-01 | 95.1% | 73.3% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4103309 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.89 | 83.0 | 5.54e-01 | 100.0% | 29.0% |
| 3428834 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.88 | 78.0 | 4.89e-01 | 100.0% | 20.3% |
| 5007230 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.85 | 79.0 | 5.37e-01 | 100.0% | 32.8% |
| 3506947 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.79 | 71.0 | 4.86e-01 | 100.0% | 29.8% |
| 3703167 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.72 | 60.0 | 4.07e-01 | 98.4% | 26.0% |
| 2819342 | 3788.1.1.1 ↗ | alpha bundles › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › VPR | 0.66 | 53.0 | 5.25e-01 | 98.4% | 85.9% |
| 5053993 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.65 | 60.0 | 5.12e-01 | 100.0% | 69.5% |
| 3435543 | 192.15.1.77 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › OST3_OST6 | 0.65 | 46.0 | 3.66e-01 | 85.2% | 39.1% |
| 5008556 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.65 | 49.0 | 4.36e-01 | 83.6% | 57.6% |
| 3258488 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.65 | 52.0 | 4.31e-01 | 85.2% | 80.0% |
| 3168797 | 5001.1.1.190 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › NPR3 | 0.62 | 55.0 | 4.68e-01 | 98.4% | 92.9% |
| 5048797 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.62 | 49.0 | 4.18e-01 | 83.6% | 100.0% |
| 4955309 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.62 | 56.0 | 5.11e-01 | 100.0% | 95.0% |
| 4010451 | 3788.1.1.15 ↗ | alpha bundles › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › PF27202 | 0.61 | 54.0 | 5.10e-01 | 100.0% | 85.3% |
| 3219902 | 1128.1.1.2 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR_2 | 0.61 | 54.0 | 4.98e-01 | 100.0% | 78.8% |
| 5045196 | 169.1.1.1 ↗ | alpha complex topology › Aldehyde ferredoxin oxidoreductase-C › Aldehyde ferredoxin oxidoreductase-C › Aldehyde ferredoxin oxidoreductase-C › AFOR_C | 0.59 | 49.0 | 3.02e-01 | 98.4% | 14.7% |
| 3269593 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.59 | 38.0 | 3.53e-01 | 82.0% | 51.2% |
| 3616168 | 611.8.1.0 ↗ | alpha bundles › N-cbl like › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 | 0.59 | 52.0 | 3.80e-01 | 100.0% | 38.2% |
| 3968894 | 635.1.1.1 ↗ | alpha arrays › YgfB-like › YgfB-like › YgfB-like › UPF0149 | 0.58 | 46.0 | 3.35e-01 | 90.2% | 30.3% |
| 3805996 | 192.10.1.7 ↗ | alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain › HisKA | 0.57 | 43.0 | 3.99e-01 | 85.2% | 64.0% |
| 3263335 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.57 | 36.0 | 3.32e-01 | 78.7% | 47.5% |
| 3754748 | 604.1.1.167 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › AMH_N | 0.57 | 51.0 | 4.27e-01 | 100.0% | 61.2% |
| 3692552 | 5071.3.1.0 ↗ | alpha bundles › cytochrome bc1 complex 11 kDa protein-like › DUF465 › DUF465 | 0.57 | 48.0 | 4.73e-01 | 93.4% | 93.8% |
| 3829941 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.57 | 44.0 | 3.40e-01 | 86.9% | 37.8% |
| 4949106 | 2007.1.3.74 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › MetOD2 | 0.56 | 48.0 | 3.41e-01 | 100.0% | 64.9% |
| 5074957 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.56 | 48.0 | 4.68e-01 | 100.0% | 90.0% |
| 3270437 | 133.1.1.1 ↗ | alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF | 0.55 | 47.0 | 3.22e-01 | 93.4% | 84.3% |
| 3592737 | 1134.1.1.0 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain | 0.55 | 48.0 | 4.74e-01 | 100.0% | 87.7% |
| 3355429 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.54 | 42.0 | 4.13e-01 | 88.5% | 76.9% |
| 3598778 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.54 | 45.0 | 4.27e-01 | 90.2% | 80.0% |
| 3389963 | 1134.1.1.0 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain | 0.51 | 46.0 | 4.45e-01 | 100.0% | 91.4% |