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OR195048.1__WNM72744.1__SEA_BOMBITAS_188__00187
Bact-VirOR195048.1__WNM72744.1__SEA_BOMBITAS_188__00187
Identity
- Accession:
- OR195048 ↗
- Kingdom:
- phage
Quality
86.2
mean pLDDT
Taxonomy
TaxID: 3043907
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-24_83-168
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02735.23 best | Ku | 77.8 | 1.40e-21 | 80.6% | 50.3% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jeyB02 | 2.40.290.10 | Mainly Beta › Beta Barrel › Ku70; Chain: A; Domain 2 › | 0.90 | 86.0 | 6.78e-01 | 100.0% | 92.0% |
| 1jeyA02 | 2.40.290.10 | Mainly Beta › Beta Barrel › Ku70; Chain: A; Domain 2 › | 0.87 | 81.0 | 7.59e-01 | 97.2% | 96.8% |
| 2w5eA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.66 | 39.0 | 4.73e-01 | 95.4% | 96.9% |
| 3k6yA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.63 | 41.0 | 4.44e-01 | 96.3% | 78.3% |
| 4i86A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.63 | 45.0 | 4.64e-01 | 100.0% | 79.4% |
| 4q63A00 | 2.40.10.430 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.62 | 41.0 | 4.40e-01 | 100.0% | 79.6% |
| 4ic6C01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.61 | 45.0 | 4.52e-01 | 97.2% | 76.4% |
| 2gsbA01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.57 | 32.0 | 3.54e-01 | 92.6% | 69.0% |
| 4mi7A00 | 3.90.70.170 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.57 | 37.0 | 3.60e-01 | 89.8% | 58.1% |
| 1mpgA01 | 3.30.310.20 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain | 0.56 | 32.0 | 3.21e-01 | 100.0% | 52.7% |
| 2jheA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 38.0 | 3.83e-01 | 87.0% | 78.7% |
| 1d1jB00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.50 | 37.0 | 3.48e-01 | 98.1% | 62.5% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3956932 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.99 | 96.0 | 6.85e-01 | 100.0% | 64.2% |
| 4606042 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.97 | 94.0 | 6.78e-01 | 99.1% | 65.6% |
| 4992391 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.97 | 94.0 | 6.68e-01 | 100.0% | 61.5% |
| 4190768 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.96 | 92.0 | 6.71e-01 | 98.1% | 66.9% |
| 4975015 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.96 | 94.0 | 6.82e-01 | 100.0% | 67.8% |
| 4987158 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.96 | 93.0 | 6.82e-01 | 100.0% | 67.3% |
| 4170346 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.96 | 93.0 | 6.72e-01 | 100.0% | 67.5% |
| 4443775 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.96 | 93.0 | 6.99e-01 | 99.1% | 75.0% |
| 4424918 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.96 | 93.0 | 6.70e-01 | 100.0% | 64.9% |
| 4661211 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.96 | 93.0 | 6.69e-01 | 100.0% | 63.8% |
| 4404169 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.96 | 93.0 | 6.73e-01 | 100.0% | 65.1% |
| 4443286 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.95 | 93.0 | 6.65e-01 | 100.0% | 64.6% |
| 4090669 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.95 | 91.0 | 6.65e-01 | 98.1% | 66.9% |
| 4472148 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.95 | 93.0 | 7.17e-01 | 100.0% | 80.5% |
| 4242756 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.95 | 93.0 | 7.12e-01 | 100.0% | 76.2% |
| 4357706 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.95 | 92.0 | 6.89e-01 | 100.0% | 72.2% |
| 4428892 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.95 | 91.0 | 6.58e-01 | 98.1% | 66.0% |
| 4459347 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.94 | 92.0 | 6.72e-01 | 100.0% | 65.3% |
| 4225561 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.94 | 90.0 | 6.54e-01 | 99.1% | 65.5% |
| 4510810 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.93 | 91.0 | 6.79e-01 | 100.0% | 72.4% |
| 4957926 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.93 | 89.0 | 6.53e-01 | 100.0% | 67.2% |
| 3744400 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.92 | 87.0 | 6.05e-01 | 100.0% | 60.7% |
| 3497709 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.91 | 70.0 | 4.96e-01 | 79.6% | 37.1% |
| 3614925 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.90 | 86.0 | 5.89e-01 | 100.0% | 58.1% |
| 3454464 | 60.1.2.2 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku,Ku_C | 0.88 | 83.0 | 5.81e-01 | 100.0% | 60.3% |
| 3368654 | 60.1.1.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain › SPOC | 0.86 | 80.0 | 7.17e-01 | 99.1% | 98.6% |
| 3997100 | 60.1.1.0 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain | 0.83 | 78.0 | 7.25e-01 | 99.1% | 93.1% |
| 3399086 | 60.1.1.2 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain › Med25 | 0.81 | 76.0 | 6.70e-01 | 100.0% | 88.0% |
| 3409552 | 60.1.1.2 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain › Med25 | 0.80 | 74.0 | 6.68e-01 | 100.0% | 89.7% |
| 3773799 | 60.1.1.12 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain › Treslin_M | 0.80 | 75.0 | 6.86e-01 | 100.0% | 94.1% |
| 3843727 | 6140.1.1.2 ↗ | alpha superhelices › Cdc45-Binding Domain in Sld3/Treslin › Cdc45-Binding Domain in Sld3/Treslin › Cdc45-Binding Domain in Sld3/Treslin › Treslin_M | 0.79 | 74.0 | 6.38e-01 | 100.0% | 77.5% |
| 3301790 | 60.1.1.0 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain | 0.78 | 67.0 | 6.93e-01 | 88.9% | 100.0% |
| 4449990 | 60.1.1.12 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain › Treslin_M | 0.78 | 73.0 | 6.46e-01 | 100.0% | 80.0% |
| 3878508 | 60.1.1.12 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain › Treslin_M | 0.76 | 70.0 | 6.66e-01 | 100.0% | 93.6% |
| 3815852 | 60.1.1.10 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain › PF28898 | 0.74 | 65.0 | 6.00e-01 | 94.4% | 100.0% |
| 4600949 | 60.1.1.0 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain | 0.72 | 63.0 | 5.78e-01 | 95.4% | 95.7% |
| 4070382 | 60.1.1.6 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain › Mat89Bb | 0.72 | 63.0 | 5.64e-01 | 95.4% | 95.3% |
| 3288253 | 1.1.13.55 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF4873 | 0.64 | 47.0 | 5.10e-01 | 97.2% | 93.3% |
| 4105189 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.63 | 45.0 | 4.71e-01 | 100.0% | 84.2% |
| 3428387 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.56 | 42.0 | 3.61e-01 | 97.2% | 47.8% |
| 3966459 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.54 | 35.0 | 3.25e-01 | 92.6% | 50.7% |
| 5006332 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.50 | 33.0 | 3.65e-01 | 84.3% | 84.7% |
| 4946010 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.50 | 38.0 | 3.82e-01 | 79.6% | 95.5% |