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OR195048.1__WNM72776.1__SEA_BOMBITAS_222__00221
Bact-VirOR195048.1__WNM72776.1__SEA_BOMBITAS_222__00221
Identity
- Accession:
- OR195048 ↗
- Kingdom:
- phage
Quality
86.3
mean pLDDT
Taxonomy
TaxID: 3043907
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-54
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF24253.2 best | DUF7454 | 95.3 | 2.20e-27 | 100.0% | 93.1% |
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.84 | 78.0 | 7.20e-01 | 100.0% | 97.0% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 70.0 | 6.52e-01 | 100.0% | 93.8% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 67.0 | 6.12e-01 | 100.0% | 94.2% |
| 3mcaB01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.70 | 61.0 | 5.05e-01 | 100.0% | 74.0% |
| 1k82B01 | 3.20.190.10 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal | 0.69 | 55.0 | 4.28e-01 | 92.5% | 70.1% |
| 3gmgA00 | 3.30.70.1880 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Protein of unknown function DUF881 | 0.65 | 55.0 | 4.14e-01 | 100.0% | 49.0% |
| 1m1gB03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 49.0 | 4.72e-01 | 90.6% | 88.9% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 47.0 | 4.48e-01 | 84.9% | 83.1% |
| 2k3aA01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.62 | 55.0 | 4.48e-01 | 100.0% | 63.0% |
| 2hqvA00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.62 | 51.0 | 3.73e-01 | 100.0% | 57.6% |
| 3na2A00 | 3.40.1570.20 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › | 0.60 | 48.0 | 3.68e-01 | 94.3% | 65.9% |
| 4he6A00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.60 | 51.0 | 4.41e-01 | 100.0% | 92.1% |
| 2fp8B00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.60 | 42.0 | 2.67e-01 | 75.5% | 23.1% |
| 2f5kA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 43.0 | 4.37e-01 | 77.4% | 100.0% |
| 1xipA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.60 | 47.0 | 2.82e-01 | 84.9% | 16.1% |
| 1wjqA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 47.0 | 4.30e-01 | 94.3% | 75.6% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 47.0 | 3.97e-01 | 92.5% | 58.3% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 46.0 | 4.36e-01 | 90.6% | 81.8% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 44.0 | 4.37e-01 | 86.8% | 91.5% |
| 2e70A00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 45.0 | 4.21e-01 | 88.7% | 71.8% |
| 3feoB02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 46.0 | 4.07e-01 | 90.6% | 67.5% |
| 2ig6A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 45.0 | 3.38e-01 | 86.8% | 82.5% |
| 3goxA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 44.0 | 4.46e-01 | 86.8% | 98.0% |
| 2c1iA02 | 3.90.640.30 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › | 0.57 | 43.0 | 3.87e-01 | 83.0% | 67.5% |
| 2jwpA00 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.57 | 46.0 | 3.42e-01 | 100.0% | 56.3% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 45.0 | 4.01e-01 | 94.3% | 78.3% |
| 4kc7A02 | 2.40.128.10 | Mainly Beta › Beta Barrel › Lipocalin › | 0.56 | 43.0 | 3.69e-01 | 90.6% | 98.0% |
| 3htyA00 | 2.40.128.280 | Mainly Beta › Beta Barrel › Lipocalin › | 0.56 | 48.0 | 4.02e-01 | 98.1% | 86.2% |
| 6m90A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 46.0 | 2.89e-01 | 94.3% | 26.4% |
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.55 | 42.0 | 4.36e-01 | 86.8% | 97.9% |
| 1m9sA03 | 2.30.30.170 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 41.0 | 3.76e-01 | 86.8% | 89.3% |
| 1mo9A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 41.0 | 2.81e-01 | 88.7% | 43.1% |
| 7mhwA01 | 2.40.128.10 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 39.0 | 3.45e-01 | 86.8% | 95.5% |
| 3fzxA00 | 2.40.360.20 | Mainly Beta › Beta Barrel › YmcC-like fold › | 0.52 | 42.0 | 2.92e-01 | 96.2% | 97.6% |
| 1uirA01 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.52 | 36.0 | 3.66e-01 | 75.5% | 94.2% |
| 1lvlA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 40.0 | 2.71e-01 | 88.7% | 60.8% |
ECOD (71)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4997059 | 4.1.1.139 ↗ | beta barrels › SH3 › SH3 › SH3 › IF5A-like_N | 0.79 | 71.0 | 6.32e-01 | 100.0% | 92.0% |
| 5066224 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.73 | 65.0 | 5.47e-01 | 100.0% | 70.0% |
| 4937389 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.73 | 65.0 | 5.12e-01 | 100.0% | 57.3% |
| 4422252 | 4.1.1.455 ↗ | beta barrels › SH3 › SH3 › SH3 › DSRB | 0.73 | 57.0 | 5.47e-01 | 84.9% | 100.0% |
| 3947700 | 4.8.1.25 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DSRB | 0.72 | 57.0 | 5.44e-01 | 86.8% | 98.4% |
| 4999430 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.72 | 65.0 | 4.93e-01 | 100.0% | 50.8% |
| 4565837 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.71 | 63.0 | 5.20e-01 | 100.0% | 68.4% |
| 5032454 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.71 | 62.0 | 4.68e-01 | 100.0% | 56.9% |
| 5037939 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.71 | 63.0 | 4.47e-01 | 100.0% | 40.6% |
| 3740221 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.70 | 62.0 | 4.40e-01 | 100.0% | 56.2% |
| 4069543 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.69 | 62.0 | 5.51e-01 | 100.0% | 88.0% |
| 5032809 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.69 | 62.0 | 4.60e-01 | 100.0% | 50.0% |
| 4029093 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 57.0 | 4.10e-01 | 92.5% | 35.5% |
| 3290509 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.68 | 60.0 | 5.04e-01 | 100.0% | 63.3% |
| 3617111 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.68 | 58.0 | 4.94e-01 | 100.0% | 63.3% |
| 4167587 | 4.1.1.178 ↗ | beta barrels › SH3 › SH3 › SH3 › ribosomal_L24 | 0.67 | 55.0 | 4.77e-01 | 92.5% | 85.9% |
| 3740208 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.67 | 57.0 | 5.39e-01 | 96.2% | 98.5% |
| 3737837 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 51.0 | 4.84e-01 | 86.8% | 98.5% |
| 3967527 | 4216.1.1.1 ↗ | a+b duplicates or obligate multimers › Heme iron utilization protein-like › Heme iron utilization protein-like › Heme iron utilization protein-like › HemS | 0.66 | 53.0 | 3.87e-01 | 96.2% | 54.4% |
| 3972820 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 48.0 | 4.33e-01 | 83.0% | 95.0% |
| 4461457 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 54.0 | 5.09e-01 | 92.5% | 89.1% |
| 4975714 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 50.0 | 4.99e-01 | 88.7% | 98.2% |
| 4629022 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.65 | 51.0 | 4.74e-01 | 88.7% | 74.3% |
| 5026824 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 56.0 | 5.17e-01 | 100.0% | 78.6% |
| 3935469 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.65 | 55.0 | 5.07e-01 | 98.1% | 94.3% |
| 3956567 | 304.148.1.1 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein Rv1825/MT1873 › Uncharacterized protein Rv1825/MT1873 › DUF881 | 0.64 | 55.0 | 4.06e-01 | 100.0% | 46.7% |
| 3630782 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.64 | 55.0 | 4.04e-01 | 98.1% | 50.3% |
| 3766659 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.64 | 53.0 | 5.16e-01 | 94.3% | 98.3% |
| 3967347 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.63 | 52.0 | 4.66e-01 | 92.5% | 89.3% |
| 3519884 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.63 | 53.0 | 4.39e-01 | 96.2% | 83.0% |
| 3636503 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.63 | 56.0 | 5.10e-01 | 100.0% | 97.1% |
| 3786518 | 4.8.1.18 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Myosin_N | 0.63 | 48.0 | 4.54e-01 | 86.8% | 96.9% |
| 3655560 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.62 | 47.0 | 3.23e-01 | 81.1% | 44.2% |
| 3166879 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.62 | 52.0 | 4.93e-01 | 96.2% | 98.5% |
| 4537528 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 51.0 | 4.74e-01 | 96.2% | 98.6% |
| 4027263 | 4.1.1.104 ↗ | beta barrels › SH3 › SH3 › SH3 › KN17_SH3 | 0.62 | 50.0 | 4.05e-01 | 100.0% | 90.0% |
| 3259547 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 52.0 | 4.10e-01 | 98.1% | 80.9% |
| 3939941 | 4.1.1.235 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW1_SPT5 | 0.60 | 49.0 | 3.83e-01 | 98.1% | 93.8% |
| 4018596 | 4.1.1.320 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_CYT4 | 0.60 | 49.0 | 4.12e-01 | 96.2% | 54.0% |
| 3933047 | 4.1.1.187 ↗ | beta barrels › SH3 › SH3 › SH3 › DIRP | 0.60 | 51.0 | 3.66e-01 | 98.1% | 76.2% |
| 3576219 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.60 | 49.0 | 3.65e-01 | 94.3% | 42.8% |
| 3514524 | 4.1.1.235 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW1_SPT5 | 0.60 | 49.0 | 3.70e-01 | 98.1% | 81.4% |
| 3584571 | 4.1.1.56 ↗ | beta barrels › SH3 › SH3 › SH3 › RBB1NT | 0.60 | 50.0 | 3.30e-01 | 96.2% | 23.0% |
| 3879653 | 4.1.1.223 ↗ | beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st | 0.60 | 47.0 | 4.40e-01 | 92.5% | 88.6% |
| 4060025 | 2003.1.2.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.59 | 48.0 | 3.17e-01 | 92.5% | 57.8% |
| 3236365 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.59 | 33.0 | 3.70e-01 | 77.4% | 70.0% |
| 3764432 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 50.0 | 4.74e-01 | 96.2% | 84.6% |
| 154312 | 4.1.1.65 ↗ | beta barrels › SH3 › SH3 › SH3 › 53-BP1_Tudor | 0.59 | 48.0 | 4.51e-01 | 96.2% | 84.3% |
| 3429053 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.59 | 46.0 | 3.36e-01 | 94.3% | 32.2% |
| 4938445 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.59 | 48.0 | 3.74e-01 | 100.0% | 44.4% |
| 4937121 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.58 | 47.0 | 3.86e-01 | 100.0% | 54.8% |
| 2127246 | 4.8.1.4 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MBT | 0.58 | 47.0 | 4.42e-01 | 98.1% | 89.9% |
| 4679625 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 44.0 | 4.27e-01 | 84.9% | 83.3% |
| 4153457 | 4.1.1.299 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, KOW1_SPT5 | 0.58 | 46.0 | 3.56e-01 | 96.2% | 94.1% |
| 3547084 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.57 | 48.0 | 4.14e-01 | 100.0% | 63.3% |
| 3737903 | 4.1.1.286 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7072 | 0.57 | 45.0 | 4.53e-01 | 90.6% | 96.4% |
| 3517728 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.57 | 46.0 | 4.34e-01 | 96.2% | 78.6% |
| 3881124 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.57 | 47.0 | 4.09e-01 | 100.0% | 64.4% |
| 5064548 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.57 | 43.0 | 4.34e-01 | 100.0% | 92.5% |
| 3190835 | 4.1.1.286 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7072 | 0.56 | 44.0 | 3.99e-01 | 96.2% | 69.4% |
| 4015427 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 45.0 | 3.13e-01 | 98.1% | 47.9% |
| 3688068 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.56 | 45.0 | 3.46e-01 | 100.0% | 99.3% |
| 3592984 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 41.0 | 3.32e-01 | 84.9% | 73.3% |
| 5041902 | 4.1.2.2 ↗ | beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › MJ1316 | 0.56 | 43.0 | 4.08e-01 | 98.1% | 86.7% |
| 3212402 | 10.32.1.37 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin | 0.55 | 44.0 | 3.26e-01 | 100.0% | 57.1% |
| 5032559 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.54 | 43.0 | 3.71e-01 | 90.6% | 77.8% |
| 4015238 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.54 | 43.0 | 3.49e-01 | 100.0% | 47.2% |
| 3524983 | 376.1.1.72 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › EHMT1-2_CRR | 0.54 | 39.0 | 3.27e-01 | 83.0% | 47.6% |
| 3398093 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.53 | 42.0 | 4.14e-01 | 96.2% | 90.0% |
| None | — | 0.51 | 40.0 | 2.55e-01 | 86.8% | 31.8% | |
| 5016827 | 5090.1.1.11 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › S_layer_N | 0.50 | 44.0 | 3.42e-01 | 100.0% | 69.7% |