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OR208547.1__WNA14236.1__phi182_68__00068
Bact-VirOR208547.1__WNA14236.1__phi182_68__00068
Identity
- Accession:
- OR208547 ↗
- Kingdom:
- phage
Quality
71.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-50
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7sl9A01 | 1.20.1730.10 | Mainly Alpha › Up-down Bundle › Sodium/glucose cotransporter › Sodium/glucose cotransporter | 0.79 | 67.0 | 3.88e-01 | 100.0% | 11.7% |
| 4ioeA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.77 | 66.0 | 5.57e-01 | 100.0% | 65.5% |
| 4jylA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.76 | 58.0 | 5.92e-01 | 86.0% | 85.7% |
| 4di1C02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.75 | 55.0 | 5.82e-01 | 82.0% | 100.0% |
| 1f45B00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.74 | 58.0 | 4.23e-01 | 86.0% | 57.9% |
| 1zoyD00 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.71 | 58.0 | 4.79e-01 | 100.0% | 51.0% |
| 2bduA02 | 1.10.150.340 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Pyrimidine 5'-nucleotidase (UMPH-1), N-terminal domain | 0.70 | 56.0 | 5.11e-01 | 96.0% | 66.2% |
| 3besR03 | 6.10.140.1480 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 53.0 | 5.24e-01 | 94.0% | 83.9% |
| 2mpkA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.68 | 56.0 | 5.08e-01 | 100.0% | 75.7% |
| 1zs3A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.68 | 57.0 | 4.02e-01 | 100.0% | 63.7% |
| 2kseA00 | 1.20.5.1040 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Sensor protein qsec. | 0.68 | 55.0 | 4.96e-01 | 100.0% | 74.0% |
| 2oq1A02 | 1.10.930.10 | Mainly Alpha › Orthogonal Bundle › Syk Kinase; Chain A, domain 2 › Syk Kinase; Chain A, domain 2 | 0.68 | 38.0 | 4.01e-01 | 72.0% | 62.2% |
| 3ermB00 | 1.10.10.710 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PSPTO_1197 like | 0.68 | 51.0 | 4.74e-01 | 88.0% | 64.1% |
| 2eb1C00 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.67 | 58.0 | 4.04e-01 | 100.0% | 75.7% |
| 1kmiZ02 | 1.10.287.500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.67 | 58.0 | 4.32e-01 | 100.0% | 38.8% |
| 1kf6A03 | 1.20.58.100 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain | 0.66 | 55.0 | 4.25e-01 | 98.0% | 41.7% |
| 3uk6A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.66 | 46.0 | 3.98e-01 | 86.0% | 45.8% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.65 | 56.0 | 4.96e-01 | 100.0% | 97.3% |
| 1ij5A01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 56.0 | 4.91e-01 | 100.0% | 86.8% |
| 2gtsA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.64 | 52.0 | 4.68e-01 | 98.0% | 63.6% |
| 1vp7A00 | 1.10.287.1040 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Exonuclease VII, small subunit | 0.64 | 53.0 | 4.78e-01 | 92.0% | 67.6% |
| 2c9oB03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.64 | 45.0 | 3.84e-01 | 86.0% | 45.8% |
| 3sfvB02 | 6.10.140.2010 | Special › Helix non-globular › Helix Hairpins › | 0.63 | 55.0 | 3.67e-01 | 100.0% | 63.5% |
| 2q1kA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.62 | 50.0 | 5.03e-01 | 100.0% | 98.1% |
| 3tklB01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 54.0 | 5.06e-01 | 100.0% | 83.9% |
| 2ds2D01 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.62 | 46.0 | 4.51e-01 | 100.0% | 75.4% |
| 1nafA02 | 1.20.58.160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 52.0 | 4.42e-01 | 98.0% | 56.5% |
| 2kwhA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 50.0 | 4.91e-01 | 98.0% | 94.6% |
| 5ha6B00 | 1.10.287.210 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 52.0 | 4.56e-01 | 100.0% | 70.9% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.61 | 53.0 | 5.10e-01 | 100.0% | 87.9% |
| 2pv4A00 | 1.10.3440.10 | Mainly Alpha › Orthogonal Bundle › Sama2622-like fold › Sama2622-like | 0.61 | 48.0 | 3.62e-01 | 96.0% | 33.1% |
| 6jrpA01 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.59 | 46.0 | 4.36e-01 | 88.0% | 100.0% |
| 3umbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.58 | 47.0 | 4.19e-01 | 98.0% | 67.1% |
| 4griA04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.57 | 39.0 | 3.88e-01 | 72.0% | 73.6% |
| 1l5jA03 | 3.40.1060.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aconitase; Domain 2 › Aconitase, Domain 2 | 0.57 | 47.0 | 3.34e-01 | 100.0% | 42.8% |
| 3fixA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 47.0 | 3.39e-01 | 100.0% | 32.1% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4575830 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.84 | 75.0 | 4.30e-01 | 100.0% | 11.5% |
| 4286282 | 507.1.1.1 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB | 0.84 | 74.0 | 5.14e-01 | 100.0% | 31.2% |
| 3904567 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.82 | 71.0 | 4.49e-01 | 100.0% | 26.2% |
| 3852378 | 4177.1.1.61 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › PLC-beta_C | 0.78 | 66.0 | 4.19e-01 | 100.0% | 19.2% |
| 3995333 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 54.0 | 5.09e-01 | 84.0% | 61.7% |
| None | — | 0.75 | 62.0 | 3.90e-01 | 94.0% | 27.0% | |
| 3832044 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.72 | 62.0 | 4.75e-01 | 98.0% | 70.4% |
| 3961347 | 150.5.1.53 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › PPE | 0.72 | 61.0 | 5.16e-01 | 98.0% | 60.0% |
| 5041482 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.71 | 63.0 | 5.11e-01 | 100.0% | 64.2% |
| 3618077 | 603.1.1.149 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Frag1 | 0.71 | 59.0 | 4.55e-01 | 100.0% | 41.6% |
| 3735729 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.71 | 60.0 | 3.52e-01 | 100.0% | 16.1% |
| 4988487 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.70 | 58.0 | 5.13e-01 | 100.0% | 68.4% |
| 4234322 | 589.1.2.0 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › TF C-terminus (Pfam 05698) | 0.70 | 53.0 | 3.74e-01 | 82.0% | 30.0% |
| 5069130 | 6026.1.1.0 ↗ | alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain | 0.69 | 57.0 | 5.71e-01 | 92.0% | 96.0% |
| 197868 | 614.1.1.0 ↗ | alpha duplicates or obligate multimers › L27 domain › L27 domain › L27 domain | 0.68 | 53.0 | 5.35e-01 | 94.0% | 92.2% |
| 3453933 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.66 | 58.0 | 4.56e-01 | 100.0% | 87.3% |
| 3451017 | 604.1.1.242 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF28744 | 0.66 | 55.0 | 3.99e-01 | 100.0% | 32.5% |
| None | — | 0.66 | 56.0 | 3.69e-01 | 98.0% | 24.1% | |
| 3495636 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.66 | 56.0 | 3.19e-01 | 98.0% | 13.7% |
| 3539986 | 5058.1.1.90 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › TMEM169 | 0.66 | 54.0 | 4.87e-01 | 100.0% | 72.0% |
| 3864054 | 192.10.1.0 ↗ | alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain | 0.65 | 56.0 | 4.22e-01 | 100.0% | 39.2% |
| 4600409 | 507.1.1.0 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related | 0.65 | 57.0 | 4.22e-01 | 100.0% | 93.3% |
| 3253483 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.63 | 54.0 | 4.89e-01 | 98.0% | 98.6% |
| 4826575 | 150.1.1.5 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › DUF305 | 0.63 | 57.0 | 5.23e-01 | 100.0% | 90.8% |
| 3234298 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.62 | 52.0 | 5.13e-01 | 98.0% | 94.5% |
| 3906467 | 1008.1.1.106 ↗ | alpha bundles › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › CSN5_C | 0.61 | 54.0 | 4.47e-01 | 100.0% | 55.6% |
| 4030407 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.61 | 49.0 | 4.45e-01 | 96.0% | 81.3% |
| 3605504 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.61 | 50.0 | 3.37e-01 | 100.0% | 24.5% |
| 2720300 | 192.22.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ral binding domain of RLIP76 › Ral binding domain of RLIP76 › RLIP76_Ral-bd | 0.60 | 49.0 | 4.88e-01 | 96.0% | 92.2% |
| 3888978 | 3812.1.1.0 ↗ | alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE | 0.59 | 47.0 | 3.73e-01 | 100.0% | 40.8% |