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OR211677.1__WKC57553.1__EPA3_136__00136

Bact-Vir

OR211677.1__WKC57553.1__EPA3_136__00136

Identity

Accession:
OR211677 ↗
Kingdom:
phage

Quality

77.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vandenendeviridae› Pakpunavirus› Pseudomonas_phage_vB_PaM_EPA3

TaxID: 3058969

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-70
PDB
Domain cluster: representative
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2c9wA01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.72 63.0 5.20e-01 98.4% 57.5%
6i8xA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.69 50.0 3.80e-01 77.8% 41.6%
7dpyB01 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.67 47.0 4.35e-01 77.8% 56.6%
7qi3A01 3.30.2140.20 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › 0.67 51.0 3.23e-01 82.5% 81.1%
2jh3A03 3.30.1360.190 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.66 53.0 4.39e-01 88.9% 80.4%
2cofA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 46.0 3.92e-01 77.8% 70.1%
2wdtC02 3.30.1490.420 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 2 0.64 51.0 4.44e-01 90.5% 81.2%
3gd0A02 3.30.920.50 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain 0.63 50.0 4.17e-01 87.3% 58.9%
3a7sA00 3.40.532.10 Alpha Beta › 3-Layer(aba) Sandwich › Ubiquitin C-terminal Hydrolase UCH-l3 › Peptidase C12, ubiquitin carboxyl-terminal hydrolase 0.63 51.0 3.59e-01 88.9% 88.2%
6qk7A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 51.0 3.30e-01 95.2% 55.4%
6phxA01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.62 51.0 3.40e-01 98.4% 94.4%
2af5A01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.62 42.0 4.44e-01 71.4% 98.1%
2dg1C00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.61 49.0 3.22e-01 95.2% 55.3%
5h4eA02 3.30.920.50 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain 0.60 47.0 3.87e-01 85.7% 56.3%
1h4rA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 44.0 3.95e-01 79.4% 73.6%
7mhuA01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.60 49.0 3.13e-01 95.2% 78.6%
3lp9A00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.60 49.0 3.34e-01 90.5% 86.3%
2kheA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.60 43.0 3.87e-01 76.2% 55.1%
2fblB00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.59 41.0 3.19e-01 74.6% 33.8%
1ei5A02 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.58 48.0 4.41e-01 92.1% 79.3%
2i8dA01 3.90.1150.200 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.56 39.0 3.60e-01 71.4% 55.6%
6j9eJ00 3.30.160.560 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 42.0 4.16e-01 84.1% 84.8%
1cruA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.55 42.0 2.59e-01 87.3% 23.2%
1wlnA00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.54 48.0 3.89e-01 100.0% 80.0%
4aghA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.54 46.0 4.29e-01 96.8% 78.8%
3ed4A02 3.30.1120.10 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.54 38.0 3.54e-01 76.2% 59.0%
5yrzB00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.53 35.0 3.64e-01 95.2% 74.1%
2byoA00 2.50.20.20 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.53 41.0 3.01e-01 87.3% 53.6%
6hoxA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 44.0 3.10e-01 100.0% 91.4%
6i18A04 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 42.0 3.64e-01 98.4% 89.7%
4on1A01 2.40.128.470 Mainly Beta › Beta Barrel › Lipocalin › 0.50 41.0 3.32e-01 98.4% 89.9%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3228484 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.72 59.0 3.92e-01 98.4% 22.7%
3887656 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.70 60.0 4.77e-01 96.8% 51.5%
3581854 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.68 54.0 4.74e-01 93.7% 58.9%
4971601 241.14.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › SARS-unique domain-C › SARS-unique domain-C 0.65 54.0 5.23e-01 93.7% 84.3%
3602698 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.65 45.0 4.11e-01 73.0% 56.5%
3233005 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.64 53.0 3.55e-01 95.2% 23.1%
4992154 304.43.1.0 ↗ a+b two layers › Alpha-beta plaits › Hypothetical protein TT1725 › Hypothetical protein TT1725 0.63 44.0 3.32e-01 73.0% 87.7%
2036559 3484.1.1.2 ↗ a+b two layers › Laminaripentaose-producing beta-1,3-glucanase insertion domain › Laminaripentaose-producing beta-1,3-glucanase insertion domain › Laminaripentaose-producing beta-1,3-glucanase insertion domain › Glyco_hydro_64 0.63 50.0 3.69e-01 87.3% 38.8%
3220737 207.1.1.52 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBA_2 0.62 50.0 3.33e-01 92.1% 22.2%
4295947 3844.1.1.1 ↗ a+b two layers › hydrogenase expression protein-like › hydrogenase expression protein-like › hydrogenase expression protein › HupH_C 0.62 45.0 3.84e-01 81.0% 45.5%
3228567 2484.1.1.162 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › F-box 0.61 49.0 3.96e-01 95.2% 42.9%
3213275 5.1.4.158 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_HPS5 0.61 50.0 3.11e-01 93.7% 73.7%
4954638 241.9.1.2 ↗ a+b two layers › Type III secretory system chaperone-like › YdhG-like › YdhG-like › DUF5655 0.61 51.0 4.28e-01 96.8% 70.2%
3232545 207.1.1.52 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBA_2 0.61 51.0 3.54e-01 96.8% 27.6%
1877235 220.1.1.7 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS 0.60 44.0 3.97e-01 79.4% 75.6%
5061066 4.6.1.2 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.60 52.0 4.78e-01 95.2% 96.2%
138730 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.60 43.0 3.87e-01 76.2% 55.1%
3665559 5.3.1.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II 0.59 49.0 3.90e-01 98.4% 95.2%
4928574 241.11.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like 0.58 48.0 4.36e-01 95.2% 78.4%
1031144 6043.1.1.3 ↗ a+b two layers › yfeY-like › yfeY-like › yfeY-like › CAP_assoc_N 0.57 43.0 3.90e-01 84.1% 76.9%
3458192 5.1.3.142 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.57 48.0 3.14e-01 98.4% 78.1%
4033928 241.9.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › YdhG-like › YdhG-like › DUF1801 0.57 47.0 3.90e-01 96.8% 60.8%
4979253 241.9.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › YdhG-like › YdhG-like › DUF1801 0.56 47.0 4.00e-01 96.8% 66.4%
3222575 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.56 44.0 3.05e-01 93.7% 22.8%
3941694 241.11.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like › YjbR 0.55 46.0 3.91e-01 96.8% 71.8%
224048 6043.1.1.3 ↗ a+b two layers › yfeY-like › yfeY-like › yfeY-like › CAP_assoc_N 0.55 43.0 3.81e-01 88.9% 81.6%
3971431 241.11.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like 0.54 45.0 4.18e-01 96.8% 73.8%
3289823 213.5.1.1 ↗ a+b three layers › Nat/Ivy › AlkZ C-terminal domain › AlkZ C-terminal domain › AlkZ-like 0.53 41.0 3.63e-01 87.3% 85.3%
3978651 241.13.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › N-terminal domain of secreted effector protein sifA › N-terminal domain of secreted effector protein sifA › Sif 0.51 36.0 3.11e-01 74.6% 57.1%
4975323 331.1.1.0 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.51 42.0 3.73e-01 100.0% 64.4%