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OR225222.1__WLJ71077.1__X__00046

Bact-Vir

OR225222.1__WLJ71077.1__X__00046

Identity

Accession:
OR225222 ↗
Kingdom:
phage

Quality

87.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Sphingomonas_phage_Kimi

TaxID: 3065696

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 2-88
PDB
Domain cluster: rep: OM621816.1__UNA00758.1__ZHS_2__00002__D2-79
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1l3iA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 38.0 3.07e-01 79.3% 94.1%
1hq0A00 3.60.100.10 Alpha Beta › 4-Layer Sandwich › Cytotoxic necrotizing factor 1 (CNF1) › Cytotoxic necrotizing factor, Rho-activating domain 0.51 43.0 3.13e-01 100.0% 87.1%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4858268 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 28.0 3.42e-01 82.8% 75.0%
3908673 11.1.1.652 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ribophorin_II_3rd 0.51 44.0 3.87e-01 97.7% 89.6%
3954749 304.51.1.2 ↗ a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › RAMPs 0.51 37.0 2.92e-01 77.0% 94.1%
3990856 304.112.1.0 ↗ a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain 0.51 36.0 3.18e-01 77.0% 82.9%
4282521 11.1.1.652 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ribophorin_II_3rd 0.50 44.0 3.84e-01 98.9% 90.4%