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OR225223.1__WLJ71159.1__X__00063

Bact-Vir

OR225223.1__WLJ71159.1__X__00063

Identity

Accession:
OR225223 ↗
Kingdom:
phage

Quality

78.0 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-73
PDB
Domain cluster: representative
CATH (59)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 52.0 5.49e-01 94.9% 75.5%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 50.0 4.66e-01 93.2% 59.7%
5ygbA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 48.0 4.38e-01 94.9% 52.5%
1dz1A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.70 49.0 4.66e-01 94.9% 61.4%
6aonA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.70 44.0 3.41e-01 91.5% 30.1%
4kbmB01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.69 47.0 4.87e-01 91.5% 76.4%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 44.0 4.33e-01 94.9% 60.0%
3fvqA03 2.40.50.470 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.68 45.0 4.57e-01 98.3% 69.0%
1ebdA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.68 42.0 3.33e-01 93.2% 30.6%
2cmgA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.68 42.0 4.46e-01 72.9% 72.5%
2dmyA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.67 50.0 4.28e-01 81.4% 55.7%
2dixA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.66 49.0 4.56e-01 81.4% 65.4%
2mdrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.66 50.0 4.28e-01 81.4% 54.3%
2l33A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.66 49.0 4.27e-01 81.4% 56.0%
1di2A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.64 47.0 4.54e-01 81.4% 72.5%
2nugB02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.62 46.0 4.42e-01 81.4% 67.6%
7r97A02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.62 46.0 4.47e-01 81.4% 76.5%
1e8cA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.62 44.0 2.97e-01 76.3% 23.9%
7d27A02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.61 45.0 3.06e-01 81.4% 29.1%
2ns9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 49.0 3.78e-01 93.2% 71.6%
7ne4A01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.61 41.0 2.64e-01 72.9% 14.6%
8f5dA05 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.60 44.0 3.06e-01 81.4% 29.9%
1g29102 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 43.0 4.75e-01 98.3% 100.0%
1azpA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 39.0 3.85e-01 94.9% 62.1%
1lv9A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 43.0 4.27e-01 94.9% 73.4%
1x49A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.59 43.0 4.14e-01 81.4% 74.3%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 46.0 4.49e-01 98.3% 78.8%
1fr3A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.57 44.0 4.24e-01 98.3% 73.1%
3l4rA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 48.0 3.59e-01 94.9% 55.0%
1oxxK02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 41.0 4.46e-01 98.3% 100.0%
3u4zA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 47.0 3.94e-01 94.9% 83.5%
1kmdA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.56 49.0 3.96e-01 100.0% 75.2%
2ra6C00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 46.0 3.51e-01 93.2% 58.0%
2pmaA01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.56 48.0 3.87e-01 100.0% 62.0%
3zl8A02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.55 48.0 3.19e-01 100.0% 25.2%
3lxrF00 1.10.4120.20 Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › 0.55 42.0 3.15e-01 91.5% 83.4%
4ntqB00 3.30.2450.20 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.54 45.0 3.44e-01 94.9% 97.9%
1bbuA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 45.0 3.48e-01 94.9% 75.7%
5w7zA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.54 42.0 3.47e-01 86.4% 84.1%
3bpnC03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 47.0 3.97e-01 98.3% 78.2%
4p78C00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.54 43.0 4.18e-01 100.0% 81.8%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.54 42.0 4.19e-01 93.2% 82.5%
3s5wA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 45.0 2.67e-01 91.5% 27.1%
1k90A02 3.90.1760.10 Alpha Beta › Alpha-Beta Complex › Adenylylcyclase toxin fold › Anthrax toxin, edema factor, central domain 0.53 43.0 3.18e-01 100.0% 33.3%
5cxmA00 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.53 42.0 3.73e-01 96.6% 100.0%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.53 45.0 4.19e-01 94.9% 96.0%
4qdiA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.53 45.0 3.06e-01 100.0% 25.3%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 40.0 4.01e-01 98.3% 80.3%
3bk5A00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.52 41.0 2.85e-01 91.5% 37.0%
4tm3A00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 44.0 2.61e-01 91.5% 27.5%
4z48A00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.52 41.0 2.86e-01 93.2% 33.8%
4lqzA00 2.40.128.570 Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4909 0.52 40.0 3.29e-01 93.2% 85.5%
2wadA04 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.52 39.0 2.55e-01 88.1% 59.5%
2ivwA01 2.30.30.830 Mainly Beta › Roll › SH3 type barrels. › 0.51 41.0 3.81e-01 93.2% 87.5%
1noyA01 3.30.342.10 Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 0.51 43.0 3.26e-01 93.2% 71.6%
1v73A00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.50 40.0 2.60e-01 94.9% 35.6%
2r41A00 3.10.450.150 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein 0.50 36.0 3.19e-01 83.1% 68.0%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.50 36.0 3.18e-01 98.3% 47.1%
2rcqA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 41.0 3.26e-01 100.0% 73.8%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3738641 4.1.1.102 beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.78 50.0 4.64e-01 94.9% 52.0%
3404925 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.77 52.0 5.62e-01 93.2% 84.0%
4026958 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 48.0 5.02e-01 93.2% 69.1%
4168653 4.1.1.111 beta barrels › SH3 › SH3 › SH3 › Tudor_RapA 0.77 49.0 5.31e-01 91.5% 78.0%
3281618 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.75 51.0 4.25e-01 94.9% 42.0%
3251559 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 47.0 5.09e-01 91.5% 76.0%
4220608 4.6.1.0 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.75 52.0 4.80e-01 72.9% 73.3%
3279470 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.74 50.0 4.32e-01 94.9% 45.6%
3319421 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.73 44.0 4.74e-01 89.8% 72.0%
3317787 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.73 44.0 4.75e-01 89.8% 72.0%
3260369 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.72 46.0 5.18e-01 93.2% 86.7%
3578731 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.72 50.0 3.29e-01 72.9% 35.3%
3408090 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.71 51.0 4.86e-01 94.9% 64.3%
3303020 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 42.0 4.55e-01 89.8% 70.0%
3656401 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 45.0 4.17e-01 94.9% 52.0%
3730229 4.1.1.102 beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.68 47.0 4.34e-01 98.3% 56.0%
3462961 5.1.4.122 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF295 0.68 43.0 2.75e-01 74.6% 14.5%
1835868 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.68 44.0 3.10e-01 93.2% 21.4%
4955327 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.68 45.0 4.63e-01 72.9% 72.7%
4287237 2003.1.2.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox 0.67 43.0 3.34e-01 93.2% 31.2%
4426764 2.4.1.12 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal 0.63 48.0 3.93e-01 98.3% 46.6%
3606532 2484.6.1.0 mixed a+b and a/b › Ribonuclease H-like › Periplasmic domain of ExbD/TolR › Periplasmic domain of ExbD/TolR 0.62 44.0 3.94e-01 100.0% 51.1%
4197641 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.61 47.0 3.77e-01 98.3% 43.6%
4047281 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.61 47.0 3.82e-01 98.3% 45.7%
4227222 4.6.1.2 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.61 49.0 4.63e-01 96.6% 72.9%
3832602 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.61 46.0 3.79e-01 83.1% 60.9%
4430538 4.6.1.6 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM 0.61 47.0 4.35e-01 98.3% 66.7%
4334562 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.60 50.0 3.81e-01 100.0% 40.8%
5044393 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.59 41.0 4.17e-01 93.2% 73.3%
4936051 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 47.0 4.82e-01 93.2% 92.7%
5003654 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 49.0 4.55e-01 93.2% 93.3%
4965524 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 46.0 4.82e-01 91.5% 94.5%
5046464 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.58 45.0 3.56e-01 98.3% 42.6%
5021763 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.58 49.0 4.53e-01 94.9% 90.7%
4329624 2.4.1.12 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal 0.57 45.0 3.76e-01 98.3% 48.6%
1075289 2.4.1.5 beta barrels › OB-fold › MOP-like › MOP-like › GlcV_C_terminal 0.57 42.0 4.10e-01 100.0% 71.9%
3905549 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.57 51.0 4.17e-01 98.3% 78.1%
5040798 324.1.1.1 a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.57 41.0 3.57e-01 94.9% 47.5%
3663972 246.3.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos 0.57 50.0 3.37e-01 100.0% 65.8%
3215090 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 47.0 4.58e-01 94.9% 95.4%
3163776 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.56 45.0 3.49e-01 98.3% 40.0%
3234647 69.1.2.1 beta complex topology › Hedgehog/intein › Hedgehog/intein › AXH › AXH 0.56 49.0 3.91e-01 96.6% 63.2%
5044599 5.1.4.14 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.56 46.0 2.62e-01 94.9% 49.0%
4565130 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 48.0 4.10e-01 96.6% 90.5%
5072315 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.55 44.0 3.58e-01 93.2% 96.7%
4991489 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.55 39.0 3.70e-01 76.3% 74.3%
3283097 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.54 46.0 3.75e-01 94.9% 50.9%
3845542 220.1.1.38 beta barrels › PH domain-like › PH domain-like › PH domain-like › UCH_N 0.54 39.0 3.40e-01 94.9% 48.0%
1869346 4294.1.1.1 few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Rieske 0.53 42.0 3.71e-01 96.6% 100.0%
4985279 319.1.1.4 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 0.52 43.0 3.86e-01 91.5% 66.3%
3973131 2003.1.3.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain 0.52 43.0 2.58e-01 91.5% 26.1%
1503826 2003.1.2.28 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Lys_Orn_oxgnase 0.52 44.0 3.14e-01 93.2% 64.4%
3622139 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.52 45.0 3.97e-01 98.3% 84.4%
3175878 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 38.0 2.91e-01 81.4% 63.9%
3967510 3454.1.1.0 beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like 0.52 41.0 3.94e-01 94.9% 78.6%
3998167 247.1.1.0 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase 0.51 43.0 2.91e-01 100.0% 28.8%
4935792 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.51 42.0 3.10e-01 93.2% 39.4%
3750640 220.1.1.38 beta barrels › PH domain-like › PH domain-like › PH domain-like › UCH_N 0.51 38.0 3.22e-01 98.3% 46.4%
5061853 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.50 42.0 3.36e-01 93.2% 50.0%
4194025 2003.1.2.30 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_3 0.50 42.0 3.28e-01 93.2% 47.7%
None 0.50 42.0 2.46e-01 93.2% 42.3%
None 0.50 42.0 2.58e-01 93.2% 18.9%