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OR228402.1__WKM80343.1__X__00013

Bact-Vir

OR228402.1__WKM80343.1__X__00013

Identity

Accession:
OR228402 ↗
Kingdom:
phage

Quality

80.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Ackermannviridae› Agtrevirus› Salmonella_phage_SW16-7

TaxID: 3062021

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-106
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4k35A02 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.59 35.0 2.81e-01 100.0% 29.9%
4c92F00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.58 40.0 4.51e-01 80.8% 97.4%
4emhA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 34.0 4.18e-01 74.0% 100.0%
3by7E00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 37.0 4.22e-01 79.8% 92.1%
1ljoA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.56 36.0 4.11e-01 77.9% 92.0%
4dxkA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.56 41.0 3.86e-01 76.9% 98.4%
4f7uG00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 35.0 4.12e-01 78.8% 98.5%
3sc7X01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.55 43.0 3.09e-01 85.6% 93.8%
3pggA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.53 36.0 4.02e-01 80.8% 93.6%
7bysA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.53 45.0 3.34e-01 97.1% 85.6%
4f7uF00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.53 35.0 3.96e-01 79.8% 95.9%
4c92G00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.51 31.0 3.52e-01 97.1% 82.7%
4azzA00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.51 42.0 3.65e-01 90.4% 84.2%
4pbcA02 3.20.10.10 Alpha Beta › Alpha-Beta Barrel › D-amino Acid Aminotransferase; Chain A, domain 2 › D-amino Acid Aminotransferase, subunit A, domain 2 0.51 40.0 3.71e-01 90.4% 66.7%
4ecnA01 2.60.40.3540 Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4458 0.50 42.0 4.26e-01 99.0% 90.3%
3wucB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 41.0 3.80e-01 90.4% 97.1%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3236030 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 49.0 4.47e-01 90.4% 93.6%
1549365 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.59 41.0 4.52e-01 81.7% 90.4%
3235867 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 49.0 4.58e-01 89.4% 96.1%
4813032 4.1.1.328 ↗ beta barrels › SH3 › SH3 › SH3 › Sm_like 0.58 38.0 4.26e-01 77.9% 88.6%
3211589 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 48.0 4.34e-01 92.3% 92.4%
4993070 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 38.0 4.37e-01 96.2% 100.0%
5047201 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.54 39.0 3.01e-01 93.3% 32.9%
4575051 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.54 36.0 3.97e-01 81.7% 87.5%
3710540 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.54 37.0 4.19e-01 78.8% 97.3%
3636075 4.1.1.221 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6914 0.54 45.0 3.92e-01 93.3% 93.3%
5077846 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.53 34.0 3.86e-01 77.9% 89.3%
4974641 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.53 34.0 3.97e-01 79.8% 97.1%
2325337 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.53 38.0 4.08e-01 80.8% 90.8%
3621457 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.53 30.0 3.47e-01 90.4% 80.0%
2503457 10.1.1.38 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › GH32_BT1760-like_C 0.53 44.0 3.78e-01 92.3% 76.5%
3730294 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.52 35.0 3.92e-01 78.8% 90.0%
3342267 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.51 39.0 3.28e-01 80.8% 86.1%
3703320 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.51 36.0 4.03e-01 78.8% 98.7%
3213121 4184.1.1.0 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.51 32.0 3.62e-01 84.6% 88.0%
3509388 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.51 41.0 2.77e-01 90.4% 25.5%
4983255 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.51 29.0 3.29e-01 96.2% 76.0%
3186302 281.1.1.1 ↗ a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II 0.50 43.0 3.30e-01 97.1% 88.0%
3270749 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.50 35.0 3.94e-01 80.8% 96.2%
3167351 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.50 30.0 3.24e-01 90.4% 69.3%
4010995 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 35.0 3.91e-01 79.8% 100.0%