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OR228459.1__WNV47115.1__X__00002
Bact-VirOR228459.1__WNV47115.1__X__00002
Identity
- Accession:
- OR228459 ↗
- Kingdom:
- phage
Quality
92.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-41
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3umcD02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.84 | 67.0 | 5.20e-01 | 92.1% | 42.3% |
| 2v3sA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.82 | 64.0 | 4.82e-01 | 97.4% | 35.4% |
| 2aj6A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.78 | 61.0 | 4.34e-01 | 100.0% | 28.3% |
| 4wv4B00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.77 | 66.0 | 5.01e-01 | 100.0% | 40.9% |
| 2blfB01 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.77 | 60.0 | 5.21e-01 | 94.7% | 55.6% |
| 1icrA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.75 | 65.0 | 4.01e-01 | 100.0% | 17.1% |
| 3solA00 | 1.20.58.1630 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chaperone lipoprotein PulS/OutS | 0.70 | 51.0 | 3.95e-01 | 100.0% | 34.1% |
| 1kblA02 | 1.10.189.10 | Mainly Alpha › Orthogonal Bundle › Pyruvate Phosphate di-kinase; domain 2 › Pyruvate Phosphate Dikinase, domain 2 | 0.69 | 50.0 | 4.29e-01 | 86.8% | 47.6% |
| 1a3qA01 | 2.60.40.340 | Mainly Beta › Sandwich › Immunoglobulin-like › Rel homology domain (RHD), DNA-binding domain | 0.69 | 57.0 | 3.72e-01 | 100.0% | 22.9% |
| 3f0cA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.68 | 50.0 | 4.67e-01 | 81.6% | 65.3% |
| 3n5lA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 51.0 | 4.45e-01 | 94.7% | 54.4% |
| 1vbgA04 | 1.10.189.10 | Mainly Alpha › Orthogonal Bundle › Pyruvate Phosphate di-kinase; domain 2 › Pyruvate Phosphate Dikinase, domain 2 | 0.67 | 49.0 | 4.16e-01 | 86.8% | 47.6% |
| 3t0yA01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.66 | 54.0 | 4.54e-01 | 100.0% | 53.0% |
| 2cr7A01 | 1.20.1160.11 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix | 0.65 | 47.0 | 4.09e-01 | 89.5% | 49.2% |
| 2oznB01 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.63 | 51.0 | 3.98e-01 | 89.5% | 83.7% |
| 5c8aA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.62 | 53.0 | 4.11e-01 | 92.1% | 44.9% |
| 3lulA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.62 | 52.0 | 3.83e-01 | 100.0% | 33.9% |
| 1tfeA02 | 1.10.286.20 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › | 0.61 | 49.0 | 4.71e-01 | 97.4% | 82.2% |
| 1b5lA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.59 | 52.0 | 3.45e-01 | 100.0% | 96.1% |
| 4e6nA02 | 6.10.140.1010 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 50.0 | 4.09e-01 | 100.0% | 54.5% |
| 7z8iC01 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.58 | 42.0 | 3.66e-01 | 97.4% | 45.7% |
| 4hlyA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 48.0 | 3.61e-01 | 100.0% | 78.3% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3428874 | 148.1.1.12 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Bromo_TP | 0.76 | 65.0 | 4.90e-01 | 100.0% | 40.0% |
| 3933962 | 148.1.1.12 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Bromo_TP | 0.76 | 65.0 | 5.18e-01 | 100.0% | 48.8% |
| 3432916 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.71 | 58.0 | 5.30e-01 | 100.0% | 70.9% |
| 4108761 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.69 | 53.0 | 3.64e-01 | 100.0% | 23.3% |
| 3450949 | 4207.1.2.63 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region › DUF1677 | 0.67 | 51.0 | 4.07e-01 | 100.0% | 62.0% |
| 3281802 | 5022.1.1.0 ↗ | extended segments › Subunit XII of photosystem I reaction centre, PsaM › Subunit XII of photosystem I reaction centre, PsaM › Subunit XII of photosystem I reaction centre, PsaM | 0.65 | 48.0 | 4.04e-01 | 81.6% | 47.7% |
| 4124570 | 1054.1.1.1 ↗ | alpha bundles › Arginine decarboxylase C-terminal helical extension › Arginine decarboxylase C-terminal helical extension › Arginine decarboxylase C-terminal helical extension › Arg_decarbox_C | 0.61 | 50.0 | 4.78e-01 | 94.7% | 84.4% |