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OR228459.1__WNV47609.1__X__00496
Bact-VirOR228459.1__WNV47609.1__X__00496
Identity
- Accession:
- OR228459 ↗
- Kingdom:
- phage
Quality
94.2
mean pLDDT
Cluster
View cluster (27 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-175
Domain cluster:
rep: NC_021330__YP_008059651.1__M202-gp129__00089__D21-171
D2
high
residues 181-252
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1r6bX03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.72 | 56.0 | 5.30e-01 | 86.1% | 96.6% |
| 3sykA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.66 | 54.0 | 5.06e-01 | 91.7% | 96.7% |
| 3solA00 | 1.20.58.1630 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chaperone lipoprotein PulS/OutS | 0.64 | 46.0 | 4.22e-01 | 75.0% | 98.9% |
| 3zssA02 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.63 | 45.0 | 4.39e-01 | 76.4% | 68.4% |
| 1w98B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.62 | 53.0 | 4.67e-01 | 100.0% | 88.6% |
| 2ffjA02 | 1.10.285.20 | Mainly Alpha › Orthogonal Bundle › Glutamate Dehydrogenase; Chain A, domain 3 › Uncharacterised protein PF01937, DUF89, domain 2 | 0.61 | 43.0 | 4.48e-01 | 75.0% | 84.6% |
| 2gs4A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.59 | 45.0 | 3.51e-01 | 81.9% | 86.1% |
| 4btfA01 | 1.20.930.20 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Adaptor protein Cbl, N-terminal domain | 0.58 | 49.0 | 4.40e-01 | 94.4% | 99.0% |
| 2ko6A00 | 1.10.1580.20 | Mainly Alpha › Orthogonal Bundle › Conserved Hypothetical Protein Ylqf; Chain: A; domain 2 › Protein of unknown function DUF1040 | 0.55 | 39.0 | 3.71e-01 | 76.4% | 77.5% |
| 3f4sA02 | 1.10.40.80 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › | 0.54 | 38.0 | 4.01e-01 | 79.2% | 82.8% |
| 3d2eA06 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.54 | 38.0 | 3.38e-01 | 75.0% | 56.6% |
| 5gl7A01 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.53 | 43.0 | 3.29e-01 | 88.9% | 54.2% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3454922 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.68 | 48.0 | 4.50e-01 | 79.2% | 60.0% |
| 3910521 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.66 | 47.0 | 4.14e-01 | 75.0% | 68.6% |
| 5017330 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 46.0 | 3.81e-01 | 75.0% | 42.4% |
| 3216803 | 3938.1.1.1 ↗ | alpha arrays › Heterogeneous nuclear ribonucleoprotein Q acidic domain › Heterogeneous nuclear ribonucleoprotein Q acidic domain › Heterogeneous nuclear ribonucleoprotein Q acidic domain › hnRNP_Q_AcD | 0.64 | 56.0 | 5.01e-01 | 95.8% | 74.0% |
| 4928130 | 181.1.1.1 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N | 0.64 | 48.0 | 4.48e-01 | 81.9% | 73.3% |
| 4013369 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.62 | 53.0 | 5.32e-01 | 100.0% | 97.3% |
| 5042711 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.62 | 54.0 | 4.34e-01 | 98.6% | 65.5% |
| 3234712 | 102.1.3.6 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › PAP/OAS1 substrate-binding domain › Nrap_D2 | 0.62 | 51.0 | 4.19e-01 | 91.7% | 51.9% |
| 3431353 | 1128.1.1.10 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › VIN3_C | 0.62 | 51.0 | 5.16e-01 | 88.9% | 98.6% |
| 3373714 | 3755.4.1.17 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Rx_N | 0.62 | 54.0 | 4.35e-01 | 97.2% | 94.3% |
| 4119921 | 1128.1.1.23 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Ycf66_N | 0.60 | 43.0 | 3.94e-01 | 75.0% | 74.5% |
| 5069733 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.59 | 48.0 | 3.26e-01 | 91.7% | 95.3% |
| 3507108 | 102.1.3.6 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › PAP/OAS1 substrate-binding domain › Nrap_D2 | 0.59 | 48.0 | 3.90e-01 | 91.7% | 51.0% |
| 3345803 | 143.1.1.0 ↗ | alpha arrays › PABP domain-like › PABC(PABP) domain › PABC(PABP) domain | 0.59 | 41.0 | 3.99e-01 | 75.0% | 95.3% |
| 3704625 | 524.1.1.1 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC | 0.57 | 46.0 | 3.96e-01 | 98.6% | 72.6% |
| 3605402 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.56 | 46.0 | 4.44e-01 | 100.0% | 98.9% |
| 4118834 | 140.1.1.6 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1,tRNA-synt_1g | 0.55 | 45.0 | 3.21e-01 | 91.7% | 54.9% |
| 4679571 | 140.1.1.8 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1g,Anticodon_3 | 0.55 | 45.0 | 3.19e-01 | 91.7% | 54.9% |
| 5017168 | 140.1.1.15 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1g | 0.55 | 45.0 | 3.19e-01 | 91.7% | 54.9% |
| 3488339 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.55 | 38.0 | 3.72e-01 | 76.4% | 95.3% |
| None | — | 0.52 | 44.0 | 3.38e-01 | 94.4% | 65.3% | |
| 3415016 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.50 | 34.0 | 3.28e-01 | 73.6% | 60.0% |