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OR228460.1__WNV47697.1__X__00023
Bact-VirOR228460.1__WNV47697.1__X__00023
Identity
- Accession:
- OR228460 ↗
- Kingdom:
- phage
Quality
87.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Chimalliviridae›
Phikzvirus›
Pseudomonas_phage_fMGyn-Pae01
TaxID: 3075110
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-73
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1p32B00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.62 | 44.0 | 3.34e-01 | 75.0% | 42.7% |
| 2ffgA00 | 3.30.720.20 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 | 0.59 | 47.0 | 4.55e-01 | 87.5% | 90.0% |
| 1yqfB00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.59 | 41.0 | 3.13e-01 | 73.6% | 46.3% |
| 4paaA04 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.55 | 49.0 | 4.18e-01 | 100.0% | 66.7% |
| 3azwA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 43.0 | 3.07e-01 | 86.1% | 61.3% |
| 4tzmB00 | 3.30.900.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain | 0.54 | 47.0 | 3.38e-01 | 100.0% | 60.8% |
| 1p9oA00 | 3.40.50.10300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like | 0.54 | 45.0 | 3.19e-01 | 100.0% | 81.4% |
| 2nvnA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.53 | 40.0 | 3.49e-01 | 84.7% | 55.0% |
| 2a90A01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.53 | 37.0 | 3.42e-01 | 75.0% | 66.3% |
| 2kafA00 | 3.40.30.150 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Coronavirus polyprotein cleavage domain | 0.53 | 42.0 | 4.37e-01 | 93.1% | 98.5% |
| 3e5zA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.52 | 38.0 | 2.68e-01 | 83.3% | 89.0% |
| 2iw3A05 | 2.40.50.990 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 46.0 | 4.03e-01 | 100.0% | 90.8% |
| 6hoxA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 40.0 | 2.92e-01 | 88.9% | 57.3% |
| 2f02B00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 43.0 | 2.92e-01 | 100.0% | 76.4% |
| 1ekgA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.50 | 41.0 | 3.67e-01 | 100.0% | 81.5% |
| 3d89A00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.50 | 37.0 | 3.17e-01 | 84.7% | 93.4% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4021531 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.60 | 43.0 | 3.88e-01 | 79.2% | 55.1% |
| 4284036 | 4099.1.1.26 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Kre28 | 0.58 | 37.0 | 3.28e-01 | 100.0% | 44.8% |
| 5056156 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.57 | 44.0 | 4.43e-01 | 86.1% | 94.7% |
| 3941423 | 252.2.1.5 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_3 | 0.57 | 41.0 | 3.98e-01 | 79.2% | 80.0% |
| 145877 | 10.1.1.25 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Toxin_R_bind_N | 0.55 | 43.0 | 3.12e-01 | 86.1% | 64.4% |
| 3177024 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.55 | 45.0 | 3.93e-01 | 90.3% | 59.1% |
| 5044373 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 37.0 | 3.96e-01 | 91.7% | 93.3% |
| 3591252 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 38.0 | 2.43e-01 | 79.2% | 90.4% |
| 4164881 | 7577.1.1.1 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 | 0.51 | 44.0 | 2.81e-01 | 100.0% | 54.5% |
| 4838956 | 4246.1.1.4 ↗ | a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_2, RNA_pol_Rpb1_1 | 0.50 | 40.0 | 2.94e-01 | 86.1% | 55.3% |