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OR228460.1__WNV47767.1__X__00093

Bact-Vir

OR228460.1__WNV47767.1__X__00093

Identity

Accession:
OR228460 ↗
Kingdom:
phage

Quality

81.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Phikzvirus› Pseudomonas_phage_fMGyn-Pae01

TaxID: 3075110

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-46
PDB
Domain cluster: representative
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2zuvA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.65 57.0 3.46e-01 100.0% 95.6%
1e3hA03 3.30.230.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain 0.65 52.0 3.42e-01 86.7% 90.1%
2ap1A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.64 51.0 3.68e-01 91.1% 63.3%
2il5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.62 54.0 3.73e-01 100.0% 92.6%
2bh8A02 6.20.370.20 Special › Other non-globular › Rhinovirus 14, subunit 4 › 0.62 35.0 4.00e-01 73.3% 75.0%
8gjaD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 49.0 3.09e-01 97.8% 38.1%
5nckA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 46.0 3.68e-01 97.8% 84.8%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 46.0 3.55e-01 91.1% 91.3%
3id6A01 3.30.420.220 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.56 44.0 3.50e-01 95.6% 68.9%
1qwkA00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.55 43.0 2.61e-01 86.7% 21.2%
2w40A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.54 44.0 2.81e-01 95.6% 89.0%
2itmA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.53 45.0 2.89e-01 97.8% 88.8%
2gupA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.52 41.0 3.41e-01 97.8% 84.5%
3aluA00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.52 42.0 2.94e-01 91.1% 31.8%
3qp1A00 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.52 43.0 2.86e-01 91.1% 98.9%
3r5dA01 3.30.70.2010 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 36.0 2.82e-01 86.7% 37.2%
1xc3A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.50 38.0 3.20e-01 97.8% 84.5%
5jr6A02 3.40.350.10 Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain 0.50 40.0 2.90e-01 97.8% 55.1%
ECOD (37)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3731058 206.1.1.20 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.67 54.0 3.36e-01 91.1% 47.2%
3422969 2484.1.1.67 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.66 54.0 4.10e-01 97.8% 74.8%
3743748 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 54.0 4.38e-01 97.8% 81.1%
4110965 2484.1.1.37 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase 0.63 53.0 3.75e-01 95.6% 51.4%
5004908 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.63 56.0 3.61e-01 97.8% 30.0%
3511414 2.9.1.1 ↗ beta barrels › OB-fold › RNB domain-like › RNB domain-like › RNB 0.63 54.0 3.17e-01 100.0% 47.1%
3269373 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 50.0 4.11e-01 100.0% 46.7%
3674397 2485.1.1.82 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › ATP-synt_10 0.62 43.0 3.38e-01 73.3% 51.6%
5051298 2485.1.1.4 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA 0.60 37.0 2.77e-01 80.0% 23.5%
3278021 3355.1.1.16 ↗ alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › DcuC 0.60 45.0 2.64e-01 86.7% 78.3%
3360754 2484.1.1.20 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 0.59 45.0 3.16e-01 82.2% 61.4%
5078265 2484.1.1.6 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_N 0.59 48.0 3.11e-01 97.8% 86.7%
3652038 2484.1.1.67 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.59 47.0 3.94e-01 93.3% 96.5%
3605971 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.58 48.0 3.56e-01 91.1% 65.5%
3254341 207.2.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.57 45.0 2.96e-01 100.0% 17.4%
3585955 304.28.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.56 46.0 3.60e-01 95.6% 49.5%
3977273 2484.1.1.8 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.56 44.0 3.27e-01 97.8% 62.9%
4029586 10.32.1.203 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.56 44.0 3.11e-01 88.9% 57.3%
3264605 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.55 41.0 3.55e-01 82.2% 77.3%
3415237 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 48.0 3.09e-01 100.0% 69.8%
3955898 2484.1.1.8 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.55 43.0 3.49e-01 97.8% 85.7%
3520433 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 49.0 3.12e-01 100.0% 43.8%
3958242 885.1.1.0 ↗ a+b complex topology › Transcription factor NusA, N-terminal domain › Transcription factor NusA, N-terminal domain › Transcription factor NusA, N-terminal domain 0.54 48.0 3.67e-01 97.8% 95.0%
86702 4325.1.1.1 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 0.54 37.0 3.58e-01 88.9% 63.5%
4995772 2004.1.1.107 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C 0.54 38.0 2.48e-01 84.4% 14.3%
3541529 883.1.1.15 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP+LBP_BPI_CETP_C 0.54 45.0 2.57e-01 91.1% 26.7%
3247149 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.53 45.0 3.68e-01 95.6% 89.4%
3784394 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 43.0 2.55e-01 100.0% 49.7%
4040937 5.1.7.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 0.53 39.0 2.10e-01 84.4% 11.6%
3302022 2484.1.1.67 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.53 48.0 3.64e-01 100.0% 50.0%
4517494 2484.1.1.8 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.53 42.0 3.16e-01 97.8% 65.4%
3974688 4325.1.1.0 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like 0.52 38.0 3.71e-01 95.6% 72.0%
3954149 221.15.1.0 ↗ a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase 0.52 37.0 3.42e-01 80.0% 58.3%
3335794 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.51 42.0 2.76e-01 100.0% 80.9%
5040512 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 38.0 2.44e-01 100.0% 60.0%
3410509 221.1.1.60 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_5 0.51 42.0 3.46e-01 95.6% 100.0%
5001130 101.1.2.44 ↗ alpha arrays › HTH › HTH › winged helix domain › Ribosomal_S25 0.50 35.0 2.99e-01 84.4% 76.0%