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OR228460.1__WNV47942.1__X__00268

Bact-Vir

OR228460.1__WNV47942.1__X__00268

Identity

Accession:
OR228460 ↗
Kingdom:
phage

Quality

59.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Phikzvirus› Pseudomonas_phage_fMGyn-Pae01

TaxID: 3075110

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-126
PDB
Domain cluster: rep: S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00670__D5-100
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ou8A00 2.30.30.220 Mainly Beta › Roll › SH3 type barrels. › SspB-like 0.93 78.0 8.35e-01 94.2% 98.1%
2nysA00 2.30.30.220 Mainly Beta › Roll › SH3 type barrels. › SspB-like 0.74 62.0 6.28e-01 96.7% 90.6%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 35.0 4.75e-01 72.5% 100.0%
1vq8Q00 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.65 37.0 4.07e-01 75.8% 69.5%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.64 37.0 4.58e-01 76.7% 98.5%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 35.0 4.23e-01 70.0% 89.3%
3jb9F00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.58 37.0 4.30e-01 85.0% 92.7%
3t0pA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.55 29.0 2.51e-01 100.0% 30.6%
5aj3P00 3.30.1320.10 Alpha Beta › 2-Layer Sandwich › S16 Ribosomal Protein; Chain: A; › Ribosomal protein S16 0.55 28.0 2.87e-01 84.2% 47.0%
2jaeA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 39.0 3.39e-01 77.5% 92.4%
3mh9A00 2.50.20.20 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.51 38.0 3.31e-01 80.8% 93.7%
4cy8A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 38.0 3.02e-01 77.5% 85.8%
1zsqA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 32.0 3.43e-01 93.3% 74.3%
2qcuB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 36.0 3.00e-01 75.8% 88.6%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
605 4.1.2.1 ↗ beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › SspB 0.93 78.0 8.35e-01 94.2% 98.1%
3388086 4.1.2.0 ↗ beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB 0.76 63.0 6.30e-01 99.2% 86.7%
165392 4.1.2.1 ↗ beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › SspB 0.73 61.0 6.15e-01 88.3% 87.5%
4282868 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.72 41.0 5.16e-01 74.2% 94.3%
4547801 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 40.0 4.57e-01 78.3% 73.3%
3281945 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 43.0 4.81e-01 78.3% 82.2%
4087011 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 42.0 4.68e-01 78.3% 82.1%
3978997 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.61 39.0 4.32e-01 79.2% 81.1%
3942912 4.1.1.323 ↗ beta barrels › SH3 › SH3 › SH3 › WYL 0.61 37.0 4.24e-01 74.2% 83.5%
3277950 11.1.4.23 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg 0.57 33.0 3.87e-01 88.3% 83.7%
5025179 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.54 34.0 3.49e-01 88.3% 65.2%
3495619 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.52 30.0 3.10e-01 70.0% 60.0%
3404845 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.51 29.0 3.22e-01 89.2% 69.5%
3788921 719.2.1.1 ↗ beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N 0.50 38.0 4.12e-01 90.8% 97.0%
D2 medium residues 170-238
PDB