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OR228460.1__WNV47956.1__X__00282

Bact-Vir

OR228460.1__WNV47956.1__X__00282

Identity

Accession:
OR228460 ↗
Kingdom:
phage

Quality

74.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 33-108
PDB
Domain cluster: representative
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3q5dA02 1.20.58.420 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP 0.82 75.0 6.89e-01 100.0% 89.7%
3r2cA00 1.10.940.10 Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like 0.81 65.0 5.22e-01 94.7% 46.4%
7e5aB02 1.20.1000.10 Mainly Alpha › Up-down Bundle › Signaling Protein - Interferon-induced Guanylate-binding Protein 1; Chain A, domain 1 › Guanylate-binding protein, C-terminal domain 0.81 74.0 5.68e-01 100.0% 50.0%
2wzkA03 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.79 68.0 6.02e-01 94.7% 71.8%
1orsC00 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.72 50.0 4.15e-01 72.4% 88.6%
5mlc900 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.72 63.0 5.68e-01 100.0% 100.0%
5wp3B00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.70 61.0 5.62e-01 100.0% 98.0%
2y39A00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.69 49.0 4.23e-01 72.4% 77.3%
4ip8A00 1.10.132.110 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Serum amyloid A protein 0.68 57.0 5.13e-01 100.0% 67.6%
2eucA00 1.10.8.570 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Hypothetical protein YfmB 0.66 45.0 4.03e-01 71.1% 51.4%
2icwG02 1.10.10.530 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › mam-mhc complex, Chain D, Domain 2 0.65 55.0 5.24e-01 98.7% 80.9%
2rdcA00 1.10.287.800 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 0.64 50.0 4.14e-01 84.2% 75.9%
2ig3A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.64 56.0 4.72e-01 97.4% 95.3%
1egdA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.64 43.0 3.52e-01 71.1% 39.7%
8gccA03 1.10.268.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 0.63 52.0 4.64e-01 93.4% 64.4%
4ioeA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.63 43.0 4.15e-01 71.1% 74.7%
2ptfB02 1.20.58.290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. 0.63 45.0 4.90e-01 89.5% 100.0%
2c12A01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.63 49.0 4.22e-01 86.8% 63.8%
1e7uA05 1.10.1070.11 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain 0.62 47.0 3.43e-01 89.5% 31.4%
5gj7A01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.62 50.0 4.29e-01 89.5% 60.8%
2ksfA00 1.20.120.620 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Backbone structure of the membrane domain of e. Coli histidine kinase receptor kdpd, 0.62 53.0 4.79e-01 97.4% 73.8%
1x04A00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.62 45.0 3.35e-01 77.6% 75.0%
2lm9A00 1.20.58.970 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 51.0 4.82e-01 96.1% 100.0%
2vqxA02 1.10.390.10 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 0.61 52.0 4.14e-01 98.7% 67.1%
1rx0A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.61 43.0 3.38e-01 73.7% 36.8%
1cunA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 52.0 4.69e-01 93.4% 95.1%
3rkoG00 1.10.287.3510 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.61 45.0 4.13e-01 78.9% 66.0%
4adnA01 1.20.1280.250 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.60 47.0 4.58e-01 89.5% 77.6%
1j77A00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.60 44.0 3.37e-01 80.3% 53.3%
1u5pA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 50.0 4.43e-01 90.8% 87.0%
2pvqA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.60 49.0 4.43e-01 90.8% 73.6%
4lwsA00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.60 43.0 3.93e-01 75.0% 61.0%
7p2yd01 1.10.520.20 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase 0.60 48.0 4.46e-01 93.4% 69.7%
5iduC03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.59 43.0 3.38e-01 77.6% 47.2%
1owlA02 1.25.40.80 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.59 49.0 4.20e-01 93.4% 56.9%
3zbhA00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.58 41.0 3.87e-01 76.3% 61.1%
2katA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 38.0 3.34e-01 85.5% 43.5%
2xubA05 6.10.140.1450 Special › Helix non-globular › Helix Hairpins › 0.58 43.0 3.92e-01 76.3% 83.3%
2iakA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.58 49.0 3.69e-01 94.7% 42.2%
3l09A01 1.20.58.1460 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 47.0 4.36e-01 90.8% 77.6%
5h5mA02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.57 47.0 3.99e-01 93.4% 66.2%
2r7rA03 1.10.10.1990 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Viral RNA-directed RNA polymerase, 4-helical domain 0.57 40.0 4.00e-01 94.7% 75.0%
2fgyA01 1.20.120.1310 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Carboxysome Shell Carbonic Anhydrase, N-terminal helical domain 0.56 40.0 3.68e-01 100.0% 55.1%
1kn1B00 1.10.490.20 Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins 0.55 46.0 3.77e-01 100.0% 48.4%
4in3B00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 47.0 2.85e-01 100.0% 57.6%
4dmvA01 1.20.58.1190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 45.0 4.42e-01 96.1% 94.1%
3pubA01 1.10.10.2400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Lepidopteran low molecular weight (30 kD) lipoprotein, N-terminal domain 0.54 38.0 3.83e-01 85.5% 74.3%
1chuA03 1.20.58.100 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain 0.54 46.0 4.46e-01 100.0% 97.7%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3500235 621.1.1.0 alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 0.82 70.0 6.92e-01 96.1% 87.5%
3641319 621.1.1.1 alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › GBP_C 0.81 74.0 5.68e-01 100.0% 49.1%
3600971 621.1.1.0 alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 0.81 73.0 4.65e-01 100.0% 24.9%
4390743 621.1.1.0 alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 0.81 73.0 5.61e-01 100.0% 52.7%
3879363 621.1.1.2 alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Smg8_Smg9 0.78 66.0 6.71e-01 100.0% 94.7%
4177832 621.1.1.2 alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Smg8_Smg9 0.77 70.0 6.51e-01 100.0% 93.7%
3619395 621.1.1.2 alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Smg8_Smg9 0.77 68.0 6.60e-01 96.1% 96.4%
4972578 109.23.1.0 alpha superhelices › Repetitive alpha hairpins › C-terminal domain in vacuolar protein sorting-associated protein 54 › C-terminal domain in vacuolar protein sorting-associated protein 54 0.77 68.0 6.27e-01 100.0% 77.8%
4452391 604.39.1.5 alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › ECF_trnsprt 0.75 68.0 4.83e-01 97.4% 37.3%
3270121 621.1.1.2 alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Smg8_Smg9 0.74 67.0 6.37e-01 100.0% 95.6%
3426697 371.1.1.7 few secondary structure elements › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › zf-RVT 0.74 48.0 3.75e-01 90.8% 31.9%
3607719 633.24.1.0 alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain 0.73 61.0 5.92e-01 93.4% 89.4%
3371139 621.1.1.2 alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Smg8_Smg9 0.72 65.0 6.13e-01 100.0% 95.6%
3608116 5086.1.1.177 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › KIF9 0.71 54.0 4.29e-01 80.3% 97.9%
4946450 101.1.17.0 alpha arrays › HTH › HTH › FF domain 0.69 60.0 5.78e-01 98.7% 84.1%
3635885 109.4.1.18 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPTA 0.69 56.0 4.35e-01 96.1% 40.6%
3873685 601.24.1.0 alpha bundles › Four-helical up-and-down bundle › FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) › FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) 0.68 55.0 4.68e-01 88.2% 90.4%
3735563 101.1.2.267 alpha arrays › HTH › HTH › winged helix domain › Nse4_C 0.66 49.0 3.96e-01 78.9% 62.0%
4965373 6058.1.1.2 alpha arrays › C-terminal alpha domain in Alpha-Glycerophosphate Oxidase › C-terminal alpha domain in Alpha-Glycerophosphate Oxidase › C-terminal alpha domain in Alpha-Glycerophosphate Oxidase › Fer2_BFD 0.66 51.0 4.41e-01 94.7% 53.3%
3655530 604.3.1.0 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.66 51.0 4.68e-01 84.2% 67.0%
4080847 4953.1.1.0 beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like 0.65 46.0 4.81e-01 86.8% 84.3%
3823825 101.35.1.23 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › Ovate 0.64 52.0 5.40e-01 90.8% 100.0%
3970705 632.15.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) 0.63 45.0 4.43e-01 73.7% 73.8%
3710228 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.63 46.0 3.86e-01 78.9% 79.3%
5075919 4995.1.1.1 alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.62 51.0 5.02e-01 89.5% 87.5%
5025218 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 53.0 3.33e-01 96.1% 29.1%
4084484 6155.1.1.17 alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › LAB_N 0.61 44.0 4.47e-01 76.3% 85.3%
5038239 3843.1.1.31 alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › Oxidored_q3 0.61 46.0 4.67e-01 84.2% 84.0%
3175481 1065.1.1.0 alpha bundles › SPX domain › SPX domain › SPX domain 0.61 50.0 3.81e-01 90.8% 72.2%
3491539 109.54.1.4 alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › UTP15_C 0.60 48.0 3.62e-01 88.2% 36.8%
3460111 4121.1.1.0 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.59 53.0 3.48e-01 100.0% 34.4%
4994339 601.5.1.0 alpha bundles › Four-helical up-and-down bundle › Colicin D immunity protein › Colicin D immunity protein 0.59 47.0 4.88e-01 89.5% 95.7%
3943035 639.2.1.0 alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) 0.59 45.0 4.77e-01 88.2% 96.9%
4426620 101.11.1.1 alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.59 48.0 4.68e-01 97.4% 96.7%
3715090 109.24.1.0 alpha superhelices › Repetitive alpha hairpins › Helical domain in dedicator of cytokinesis protein 9 › Helical domain in dedicator of cytokinesis protein 9 0.58 51.0 4.49e-01 98.7% 67.8%
3611289 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.55 43.0 3.44e-01 84.2% 99.3%
3690980 1128.1.1.1 alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR 0.54 41.0 3.71e-01 81.6% 61.0%
2074038 633.16.1.2 alpha bundles › Bromodomain-like › PMT helical bundle domain-like › PMT helical bundle domain-like › TcdB_N 0.53 43.0 4.24e-01 100.0% 85.2%
3705324 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.53 40.0 4.02e-01 84.2% 80.0%
3486170 110.1.1.0 alpha arrays › DEATH domain › DEATH domain › DEATH domain 0.53 36.0 3.34e-01 72.4% 53.3%
3191927 190.1.1.0 alpha arrays › HMG-box-like › HMG-box › HMG-box 0.51 41.0 3.49e-01 92.1% 54.8%