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OR231920.1__WKW88818.1__pzkkv61_245__00245

Bact-Vir

OR231920.1__WKW88818.1__pzkkv61_245__00245

Identity

Accession:
OR231920 ↗
Kingdom:
phage

Quality

72.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Jiaodavirus› Klebsiella_phage_pzk-kv6-1

TaxID: 3062824

Cluster

View cluster (36 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-93
PDB
Domain cluster: rep: MW239124.1__QQG32192.1__CkP1_0225__00225__D6-80
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 37.0 4.09e-01 98.9% 66.7%
2k5fA01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.66 48.0 4.97e-01 100.0% 80.7%
6e55A01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.64 49.0 5.26e-01 100.0% 98.6%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 40.0 4.24e-01 98.9% 74.4%
1vwxA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 39.0 4.13e-01 98.9% 72.5%
6fhoA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 48.0 3.69e-01 89.7% 59.1%
4akgA03 3.20.180.20 Alpha Beta › Alpha-Beta Barrel › Split barrel-like › Dynein motor heavy chain, linker domain, subdomain 3 0.57 34.0 3.48e-01 94.3% 60.2%
3nlcA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 47.0 3.46e-01 92.0% 82.3%
2wesA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 46.0 2.88e-01 89.7% 65.5%
4dgkA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 45.0 3.76e-01 89.7% 88.7%
3kbgA03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 33.0 3.77e-01 98.9% 87.5%
5uaoC00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 45.0 2.81e-01 90.8% 61.1%
1s3iA02 3.10.25.10 Alpha Beta › Roll › Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2 › Formyl transferase, C-terminal domain 0.55 39.0 3.77e-01 75.9% 89.2%
2culA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 44.0 3.34e-01 92.0% 86.7%
5jciA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 45.0 4.01e-01 95.4% 96.2%
2i0zA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 44.0 3.22e-01 93.1% 85.8%
2aqjA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 43.0 2.74e-01 94.3% 63.8%
1q1rA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 45.0 4.00e-01 97.7% 98.5%
4fk1A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 43.0 4.01e-01 93.1% 97.3%
3aljA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 43.0 3.26e-01 93.1% 56.2%
6frlA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 41.0 2.60e-01 88.5% 65.6%
3kd9A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 43.0 3.15e-01 95.4% 49.4%
3ef6A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 43.0 3.88e-01 95.4% 100.0%
ECOD (38)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3511278 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 39.0 4.29e-01 100.0% 68.6%
3303889 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.68 40.0 4.33e-01 100.0% 69.3%
3818428 4.1.1.66 ↗ beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.67 40.0 4.29e-01 100.0% 69.3%
3355992 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.66 34.0 4.41e-01 82.8% 93.3%
3423337 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.66 40.0 4.17e-01 100.0% 65.0%
3676844 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 39.0 4.18e-01 98.9% 68.0%
3300051 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.65 38.0 4.08e-01 98.9% 66.7%
3342430 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 40.0 4.33e-01 100.0% 72.0%
3898952 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 43.0 4.57e-01 100.0% 78.7%
3301383 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.64 34.0 4.25e-01 88.5% 90.0%
4213135 4.1.1.38 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.62 41.0 3.62e-01 98.9% 46.8%
3966138 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.60 49.0 3.40e-01 89.7% 67.2%
3189214 2003.1.2.40 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_oxidored 0.58 47.0 2.94e-01 89.7% 85.5%
3699975 6110.1.1.1 ↗ alpha superhelices › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › DHC_N2 0.57 35.0 2.20e-01 95.4% 9.9%
3929424 6110.1.1.1 ↗ alpha superhelices › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › DHC_N2 0.57 35.0 2.27e-01 94.3% 13.4%
3954070 2003.1.2.16 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.56 46.0 2.99e-01 92.0% 69.5%
5047494 2003.1.2.17 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase 0.55 44.0 2.80e-01 89.7% 94.4%
3660755 4.8.1.21 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › PTM_DIR17_Tudor 0.54 39.0 4.12e-01 100.0% 86.7%
3687487 2003.1.2.12 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › DAO 0.54 43.0 2.83e-01 89.7% 86.1%
3722033 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.54 43.0 2.80e-01 89.7% 84.9%
3678875 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.54 46.0 3.94e-01 95.4% 90.0%
4964081 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.53 45.0 4.16e-01 95.4% 96.5%
5037861 243.6.1.9 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 0.53 34.0 3.66e-01 77.0% 76.0%
4947899 243.6.1.12 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › PUA 0.53 37.0 3.82e-01 81.6% 75.3%
3214033 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.53 44.0 3.94e-01 95.4% 93.8%
5003057 243.6.1.0 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.52 34.0 3.73e-01 88.5% 82.9%
3196919 2003.1.2.12 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › DAO 0.52 43.0 2.78e-01 89.7% 85.8%
5001432 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.52 44.0 3.99e-01 96.6% 98.4%
5005984 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.51 43.0 3.62e-01 95.4% 80.0%
4675853 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.51 43.0 3.85e-01 96.6% 94.6%
4102382 2003.1.2.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox 0.51 43.0 3.71e-01 95.4% 92.1%
4098926 244.1.1.3 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GIDA 0.51 43.0 2.75e-01 96.6% 37.5%
3930901 394.1.1.0 ↗ few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins 0.51 42.0 3.46e-01 94.3% 81.8%
3476178 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 46.0 4.15e-01 100.0% 86.7%
3959816 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.51 40.0 2.72e-01 86.2% 63.7%
3954363 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.51 43.0 3.72e-01 94.3% 87.4%
3181649 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.50 42.0 3.60e-01 95.4% 86.7%
5071101 2003.1.2.40 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_oxidored 0.50 42.0 2.82e-01 94.3% 74.6%
D2 medium residues 95-169
PDB